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Report for CCDS1512.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1512.1 Public Homo sapiens 1 ANGEL2 24 110 108 CCDS HistoryNCBI Gene:90806Re-query CCDS DB by CCDS ID:1512.1Re-query CCDS DB by GeneID:90806See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1512.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000366962.8 ENSP00000355929.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000366962.8Link to Ensembl Protein Viewer:ENSP00000355929.3Re-query CCDS DB by Nucleotide ID:ENST00000366962Re-query CCDS DB by Protein ID:ENSP00000355929
Original member Current member NCBI NM_144567.5 NP_653168.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_144567.5Link to Protein Sequence:NP_653168.2Re-query CCDS DB by Nucleotide ID:NM_144567Re-query CCDS DB by Protein ID:NP_653168Link to BLAST:NP_653168.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_653168.2 544 Q5VTE6-1 544 100% 0 0

Chromosomal Locations for CCDS 1512.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 212995041 212995192 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 212997155 212997318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 213000326 213000383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 213000786 213000912 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 213005033 213005454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 213007129 213007198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 213008210 213008466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 213013093 213013418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 213015613 213015671 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1635 nt):
ATGGAAGCCTGGCGCTGTGTGAGGAAGGGCTACGGCCACTGTGTGGTGGGAAGAGGCCGATACCCCATGT
TTCCCCATCACTCGAGGAGTCTGGGCAGAGACTGGACTACACCGTGGGAGAATCTGCAAAGGTGTTGCTG
GAACAGACATATTTCTAGTTGTATGAGGTGGCCTGGACATTACTCTCGAGCTCCTTACCCATACTTCAGT
AGTAGGCATTTTTCACTAAATTGGAGACCACCCTGTTTGTTTGAGTCTAGAACTCAGTTCCAGTACTGTA
ACTGGAGACCTGACAACCTGAGCCAGACATCTTTGATTCATCTCTCTAGTTACGTCATGAACGCTGAGGG
AGATGAGCCTTCATCAAAACGAAGAAAACACCAAGGTGTGATAAAGCGGAATTGGGAATATATATGTAGC
CATGATAAAGAAAAAACGAAGATCCTAGGAGACAAAAATGTTGATCCCAAATGTGAAGACAGTGAGAACA
AGTTTGACTTTTCAGTGATGTCCTATAATATACTTTCACAAGATTTACTGGAAGATAACTCTCACCTTTA
TAGACATTGCCGGCGGCCAGTATTACACTGGAGTTTTAGGTTTCCCAATATTCTGAAAGAAATTAAACAT
TTTGATGCAGACGTACTTTGTTTGCAAGAAGTTCAAGAAGATCATTATGGAGCAGAGATCAGGCCAAGTT
TGGAATCACTGGGTTATCACTGTGAATATAAGATGCGGACAGGAAGGAAACCTGATGGCTGTGCTATTTG
CTTCAAACATTCCAAATTTTCACTCTTGTCAGTGAACCCAGTGGAATTCTTCCGCCCTGATATTTCTCTG
TTGGACAGAGACAATGTTGGATTAGTTTTACTCTTACAGCCCAAAATTCCATATGCTGCCTGCCCTGCAA
TCTGCGTAGCAAATACGCATCTGTTGTATAATCCAAGGCGAGGTGATATTAAGCTGACGCAATTGGCAAT
GCTACTGGCAGAGATTTCCAGTGTTGCCCACCAGAAAGATGGCAGCTTCTGCCCTATTGTTATGTGTGGT
GACTTTAATTCTGTTCCTGGTTCTCCACTATATAGTTTCATAAAGGAAGGAAAATTGAATTATGAAGGAC
TTCCCATAGGAAAGGTATCTGGCCAGGAACAGTCTTCACGGGGACAAAGAATTTTATCTATTCCAATTTG
GCCCCCAAACCTAGGTATCTCACAGAACTGTGTGTATGAGGTACAGCAGGTACCAAAAGTAGAAAAGACA
GACAGTGATCTGACACAAACACAGCTGAAGCAAACAGAGGTCCTAGTGACAGCTGAAAAATTGTCTTCAA
ATTTACAGCACCATTTCAGTTTGTCATCTGTTTATTCACATTACTTTCCTGACACTGGAATTCCAGAAGT
GACCACCTGTCATTCCCGAAGTGCCATAACTGTGGATTATATTTTCTACTCTGCAGAAAAGGAAGATGTT
GCTGGGCACCCAGGAGCTGAAGTTGCTTTGGTTGGTGGCTTGAAACTTCTAGCTAGACTGTCACTTCTTA
CAGAACAAGACTTATGGACTGTTAATGGACTTCCAAACGAAAATAACTCTTCAGATCATCTGCCTTTATT
GGCAAAGTTCAGACTTGAGCTCTGA

Translation (544 aa):
MEAWRCVRKGYGHCVVGRGRYPMFPHHSRSLGRDWTTPWENLQRCCWNRHISSCMRWPGHYSRAPYPYFS
SRHFSLNWRPPCLFESRTQFQYCNWRPDNLSQTSLIHLSSYVMNAEGDEPSSKRRKHQGVIKRNWEYICS
HDKEKTKILGDKNVDPKCEDSENKFDFSVMSYNILSQDLLEDNSHLYRHCRRPVLHWSFRFPNILKEIKH
FDADVLCLQEVQEDHYGAEIRPSLESLGYHCEYKMRTGRKPDGCAICFKHSKFSLLSVNPVEFFRPDISL
LDRDNVGLVLLLQPKIPYAACPAICVANTHLLYNPRRGDIKLTQLAMLLAEISSVAHQKDGSFCPIVMCG
DFNSVPGSPLYSFIKEGKLNYEGLPIGKVSGQEQSSRGQRILSIPIWPPNLGISQNCVYEVQQVPKVEKT
DSDLTQTQLKQTEVLVTAEKLSSNLQHHFSLSSVYSHYFPDTGIPEVTTCHSRSAITVDYIFYSAEKEDV
AGHPGAEVALVGGLKLLARLSLLTEQDLWTVNGLPNENNSSDHLPLLAKFRLEL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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