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Report for CCDS15284.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15284.1 Public Mus musculus 1 Tmcc2 23 108 98 CCDS HistoryNCBI Gene:68875Re-query CCDS DB by CCDS ID:15284.1Re-query CCDS DB by GeneID:68875See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15284.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000045473.15 ENSMUSP00000038369.9 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000045473.15Link to Ensembl Protein Viewer:ENSMUSP00000038369.9Re-query CCDS DB by Nucleotide ID:ENSMUST00000045473Re-query CCDS DB by Protein ID:ENSMUSP00000038369
Original member Current member NCBI NM_178874.3 NP_849205.1 Accepted alive Link to Nucleotide Sequence:NM_178874.3Link to Protein Sequence:NP_849205.1Re-query CCDS DB by Nucleotide ID:NM_178874Re-query CCDS DB by Protein ID:NP_849205Link to BLAST:NP_849205.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_849205.1 706 Q80W04 706 100% 0 0

Chromosomal Locations for CCDS 15284.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 132357506 132357817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 132358903 132359038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 132360275 132361215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 132380657 132381181 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 132390977 132391183 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2121 nt):
ATGAAGAGGTGCAAATCGGACGAGCTGCAGCAACAGCAGGGCGAGGAGGATGGGGCTGGGATGGAAGACG
CTGCTTGCCTTCTGCCAGGCGCGGACCTCCGGCATGGGGAGGCCTCGAGTGCTAACTCCGCTGGCGGGCC
AACTTCAGATGCTGGCGCTGCGGTGGCACCCAACCCGGGTCCCCGAAGCAAGCCTCCTGATTTAAAGAAA
ATCCAGCAGCTCTCAGAGGGCTCCATGTTTGGCCACGGCCTGAAGCACCTGTTTCACAGCCGCCGCAGGT
CACGGGAGAGGGAGCACCAGGCGTCTCAGGAGGCCCAGCAGCAGCAGCAACAGCAGGGCCTATCCGATCA
GGACTCCCCAGATGAGAAGGAACGCTCCCCGGAGATGCACCGCGTCTCCTATGCTGTGTCCCTGCACGAC
CTGCCTGCCCGACCTACTGCTTTCAACCGGGTGTTACAGCAAATCCGCTCCAGGCCCTCCATCAAGCGGG
GCGCCAGCCTGCACAGCAGTGGCGGGAGCGGTGGTCGCCGTGCCAAGAGCAGCTCCCTGGAGCCACAGCG
TGGCAGTCCTCACCTGCTTCGTAAGGCCCCCCAGGACAGCAGCCTGGCCGCCATCCTGCACCAGCACCAG
GGCCGACCCCGTTCCTCCTCTACCACCGACACCGCCTTGCTCCTGGCCGATGGCAGCAGTGCGTACCTCC
TGGCTGAGGAAGCAGAGAGCATCGGGGACAAGGGTGACAAGGGAGATCTTGTGGCCCTGAGCCTCCCCTC
TGGCCCTGGCCATGGTGACTCTGATGGACCCATCAGCCTGGATGTGCCAGATGGAGCACCGGACCCCCAG
CGAACTAAGGCTGCCATCGAACACCTGCACCAAAAGATCTTGAAGATCACTGAGCAGATCAAGATCGAGC
AGGAGGCGCGGGATGATAACGTGGCAGAGTACCTGAAGCTGGCCAACAATGCGGACAAGCAGCAGGTGTC
GCGCATCAAGCAGGTGTTTGAAAAGAAGAACCAGAAGTCCGCCCAGACCATCGCCCAGCTGCACAAAAAA
CTGGAGCACTACCGTCGGCGCCTGAAGGAAATCGAGCAGAATGGGCCCTCGCGGCAGCCCAAGGATGTGC
TACGCGATATGCAGCAAGGGCTGAAGGATGTGGGCGCCAACATGCGTGCCGGCATTAGTGGCTTCGGGGG
TGGTGTGGTGGAGGGTGTCAAGGGCAGTCTTTCCGGCCTCTCGCAAGCTACCCACACTGCGGTGGTGTCC
AAGCCCCGGGAGTTCGCCAGCCTCATTCGCAACAAGTTCGGCAGTGCCGACAACATCGCCCACCTGAAGG
ACCCCATGGAAGATGGACCCCCTGAAGAGGCAGCCCGGGCGCTGAGTGGCAGTGCCACACTGGTGTCCAG
CCCCAAGTACGGCAGTGACGATGAATGCTCGAGTGCCAGTGCCAGCTCAGCTGGGGCAGGCAGCAACTCT
GGGGCTGGGCCAGGAGGTGCACTGGGAAGCCCGAGATCCAACACTCTTTATGGTGCCCCTGGAAATCTGG
ACACTCTGCTGGAGGAACTGCGGGAGATAAAGGAGGGCCAGTCACACCTGGAGGACTCCATGGAGGACTT
GAAGACTCAGCTGCAGAGGGACTACACCTACATGACCCAGTGCCTGCAAGAAGAGCGCTACAGGTATGAG
AGGCTGGAGGAACAGCTGAACGACCTGACTGAGCTTCACCAGAATGAAATGACCAACCTAAAGCAGGAGC
TGGCCAGCATGGAGGAGAAGGTGGCCTACCAGTCCTACGAGAGGGCCCGGGATATCCAGGAGGCCGTGGA
GTCCTGCCTGACCCGAGTCACCAAGCTGGAACTGCAGCAGCAGCAGCAGCAAGTGGTGCAGTTAGAAGGT
GTGGAGAACGCCAACGCGCGCGCCCTGCTGGGCAAGTTCATCAACGTGATCCTGGCACTCATGGCCGTGC
TGCTGGTGTTTGTGTCCACCATTGCCAACTTCATCACCCCCCTCATGAAGACGCGCCTCCGGATCACCAG
CACCGCCCTCCTGCTCCTCGTCCTCTTCCTACTGTGGAAGCACTGGGCCTCCCTCACCTACCTCCTGGAG
CATGTGCTGCTGCCCAGCTGA

Translation (706 aa):
MKRCKSDELQQQQGEEDGAGMEDAACLLPGADLRHGEASSANSAGGPTSDAGAAVAPNPGPRSKPPDLKK
IQQLSEGSMFGHGLKHLFHSRRRSREREHQASQEAQQQQQQQGLSDQDSPDEKERSPEMHRVSYAVSLHD
LPARPTAFNRVLQQIRSRPSIKRGASLHSSGGSGGRRAKSSSLEPQRGSPHLLRKAPQDSSLAAILHQHQ
GRPRSSSTTDTALLLADGSSAYLLAEEAESIGDKGDKGDLVALSLPSGPGHGDSDGPISLDVPDGAPDPQ
RTKAAIEHLHQKILKITEQIKIEQEARDDNVAEYLKLANNADKQQVSRIKQVFEKKNQKSAQTIAQLHKK
LEHYRRRLKEIEQNGPSRQPKDVLRDMQQGLKDVGANMRAGISGFGGGVVEGVKGSLSGLSQATHTAVVS
KPREFASLIRNKFGSADNIAHLKDPMEDGPPEEAARALSGSATLVSSPKYGSDDECSSASASSAGAGSNS
GAGPGGALGSPRSNTLYGAPGNLDTLLEELREIKEGQSHLEDSMEDLKTQLQRDYTYMTQCLQEERYRYE
RLEEQLNDLTELHQNEMTNLKQELASMEEKVAYQSYERARDIQEAVESCLTRVTKLELQQQQQQVVQLEG
VENANARALLGKFINVILALMAVLLVFVSTIANFITPLMKTRLRITSTALLLLVLFLLWKHWASLTYLLE
HVLLPS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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