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Report for CCDS15399.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15399.1 Public Mus musculus 1 Cryzl2 23 108 98 CCDS HistoryNCBI Gene:226527Re-query CCDS DB by CCDS ID:15399.1Re-query CCDS DB by GeneID:226527See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15399.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000046743.10 ENSMUSP00000044945.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000046743.10Link to Ensembl Protein Viewer:ENSMUSP00000044945.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000046743Re-query CCDS DB by Protein ID:ENSMUSP00000044945
Original member NCBI NM_001033284.2 NP_001028456.1 Updated not alive Link to Nucleotide Sequence:NM_001033284.2Link to Protein Sequence:NP_001028456.1Re-query CCDS DB by Nucleotide ID:NM_001033284Re-query CCDS DB by Protein ID:NP_001028456
Current member NCBI NM_001033284.3 NP_001028456.1 Accepted alive Link to Nucleotide Sequence:NM_001033284.3Link to Protein Sequence:NP_001028456.1Re-query CCDS DB by Nucleotide ID:NM_001033284Re-query CCDS DB by Protein ID:NP_001028456Link to BLAST:NP_001028456.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001028456.1 350 Q3UNZ8-1 350 100% 0 0

Chromosomal Locations for CCDS 15399.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 157458596 157458645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 157458744 157458852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 157461953 157462049 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 157464409 157464467 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 157464965 157465030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 157465712 157465821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 157467166 157467247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 157470616 157470797 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 157472188 157472416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 157488443 157488511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1053 nt):
ATGGCAGCAAGGCTGTGTACGCGTTGCCTCCCTCCGGTGTGGCTCTGCAGGCAAGCCTGGCAGGGCCAAG
GCCGGCACTACCGAGCTGCACTCTGCACCGAGTTGAAGCAGCCCCTGACCATTCAAGAGGTGGCTCCCCG
CCCCGTCGGGCCACAGGAGGTCAGAGTTGATGTTCATTTCTGTGGTGTTAACTTTGCTGATATTTTGGCC
TGTCGTGGTCAGTATCAGGAAAAGCCTCCTCTTCCCTTTACACCGGGAATGGAGTTTTCTGGGGCTGTCT
TAGAGACAGGAACAGATGTCAGCACTGTGAAAAAGGGAGATCGAGTTATTGGAGTAAGTAGCTTTCATGC
TATGGCGGAGCAGTGCATCACGGACCAGAAGACCCTGTGGCGGATTCCAGAAAATGTCTCTTTGCAAGAT
GCTGCAGTGTTACCGGTATCTTATGGCACAGCTATTTTGGCTGTAGATCATCGGGCCCGCATCCAGCCCG
GAGAAACTGTTTTAGTGACAGCAGCTGCTGGAGCCACAGGCCTCGCAGTGATAGACGTGGCGACAAATGT
GTTCCGCGCCAAGGTCATAGCTGCCACTGGAAGTGACGAGAAGTGCAAGCTGGCGGTGCAGAGGGGAGCA
CAGTTCAGTGTGAACTACAGCCAGGGCAGCCTGAGGGATGCAGTGAAGAAGCTGGCAGGCAGCGGTGGGG
TCAACGTAGCCATTGACATGGTGGGAGGAGATGTCTTCCTGGAGTCTCTCCGCAGCCTGGCGTGGGAGGG
CAGGATCGTGGTGTTGGGATTCGCTGGAGGAAACATTGCGTCCGTGCCCAGCAACCTGTTGCTCCTGAAG
AACATCTCGGCCATGGGACTGTACTGGGGTCGCTACCAACACCAGGACTTTGCAGTGTTTTCCAAGAGCA
TGTCCACAGCCATGCAGTACTGCCAGCAAGGGCTCATCCACCCCCACACGGGTGCCGTGTTTAAGCTGGA
GAAGATCAACGATGCCTTCCTTCATGTGATGCAGCGCAAATCCACGGGCAAGGTGCTCTTGTCCCTCAAG
TAA

Translation (350 aa):
MAARLCTRCLPPVWLCRQAWQGQGRHYRAALCTELKQPLTIQEVAPRPVGPQEVRVDVHFCGVNFADILA
CRGQYQEKPPLPFTPGMEFSGAVLETGTDVSTVKKGDRVIGVSSFHAMAEQCITDQKTLWRIPENVSLQD
AAVLPVSYGTAILAVDHRARIQPGETVLVTAAAGATGLAVIDVATNVFRAKVIAATGSDEKCKLAVQRGA
QFSVNYSQGSLRDAVKKLAGSGGVNVAIDMVGGDVFLESLRSLAWEGRIVVLGFAGGNIASVPSNLLLLK
NISAMGLYWGRYQHQDFAVFSKSMSTAMQYCQQGLIHPHTGAVFKLEKINDAFLHVMQRKSTGKVLLSLK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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