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Report for CCDS15547.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15547.1 Public Mus musculus 1 Fh1 23 108 98 CCDS HistoryNCBI Gene:14194Re-query CCDS DB by CCDS ID:15547.1Re-query CCDS DB by GeneID:14194See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15547.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000027810.13 ENSMUSP00000027810.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000027810.13Link to Ensembl Protein Viewer:ENSMUSP00000027810.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000027810Re-query CCDS DB by Protein ID:ENSMUSP00000027810
Original member Current member NCBI NM_010209.2 NP_034339.2 Accepted alive Link to Nucleotide Sequence:NM_010209.2Link to Protein Sequence:NP_034339.2Re-query CCDS DB by Nucleotide ID:NM_010209Re-query CCDS DB by Protein ID:NP_034339Link to BLAST:NP_034339.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_034339.2 507 P97807-1 507 100% 0 0

Chromosomal Locations for CCDS 15547.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 175601424 175601566 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 175603938 175604091 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 175606055 175606182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 175607817 175608020 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 175609637 175609802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 175612147 175612329 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 175614737 175614913 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 175616529 175616639 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 175619051 175619185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 175625451 175625573 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1524 nt):
ATGTACCGCGCACTCCGTCTCCTCGCGCGCTCGCGTCGCCTCCTGCGGGTTCCGTCCGCCGGTGCTGCAG
TGTCTGGGGAAGCGACCACCCTCCCGCGGTGTGCTCCGAACGTCGCGCGAATGGCAAGCCAAAATTCCTT
CCGTGTAGAGTTCGACACCTTTGGTGAATTGAAGGTTCCAACCGATAAGTATTATGGTGCTCAGACCGTA
AGATCTACGATGAACTTTAAGATTGGAGGTGCTACGGAACGTATGCCAATCCCAGTCATTCAAGCTTTCG
GCATCTTGAAGCGAGCTGCTGCTGAAGTAAACCAGGAGTATGGTCTCGATCCAAAGATTGCTAGTGCAAT
AATGAAGGCCGCAGATGAGGTAGCTGAAGGTAAATTAAATGATCACTTTCCTCTGGTGGTTTGGCAGACT
GGATCAGGAACCCAGACAAACATGAATGTAAATGAAGTCATTAGCAACAGAGCAATTGAAATGTTAGGAG
GTGAACTTGGCAGCAAGAAGCCTGTGCACCCCAATGATCATGTTAACAAAAGCCAGAGCTCGAATGACAC
CTTTCCCACAGCAATGCATATTGCTGCTGCAGTGGAAGTTCACAAGGTCCTGTTGCCAGGGTTACAGAAG
CTCCATGATGCTCTCAGTGCAAAATCCAAAGAGTTTGCGCAGGTCATCAAAATTGGGCGAACTCACACGC
AGGATGCTGTCCCTCTTACTCTTGGACAGGAATTCAGTGGTTACGTTCAGCAAGTCCAGTATGCGATGGT
GAGAATAAAAGCCGCCATGCCAAGAATCTACGAGCTCGCTGCTGGAGGCACTGCTGTGGGGACGGGGTTA
AACACCAGGATCGGTTTCGCAGAAAAGGTGGCCGCAAAAGTAGCAGCACTCACAGGTTTGCCTTTTGTCA
CTGCCCCGAATAAGTTTGAAGCTCTGGCTGCTCATGATGCTCTGGTTGAGCTTAGTGGAGCCATGAACAC
TGCCGCCTGCAGTCTAATGAAGATAGCGAATGATATTCGCTTCCTGGGTTCTGGTCCTCGGTCAGGTTTG
GGAGAGCTGATCTTGCCTGAAAACGAGCCAGGGAGCAGCATCATGCCAGGAAAGGTGAACCCTACTCAGT
GTGAAGCGATGACCATGGTTGCAGCCCAAGTCATGGGGAATCACGTTGCTGTTACCGTTGGAGGCAGCAA
TGGACATTTTGAACTGAATGTGTTTAAACCAATGATGATTAAGAATGTGCTGCACTCAGCCAGGCTACTG
GGAGATGCTTCAGTGTCCTTCACAGACAACTGTGTGGTCGGGATCCAGGCCAACACAGAGCGGATCAACA
AGCTAATGAATGAGTCTTTAATGTTGGTCACAGCTCTTAATCCACATATAGGGTATGACAAAGCAGCAAA
GATTGCCAAGACCGCACACAAGAACGGATCAACCTTAAAGGAAACGGCTATTGAACTTGGCTATCTCACA
GCAGAGCAGTTTGATGAGTGGGTGAAACCCAAGGATATGCTGGGTCCAAAGTGA

Translation (507 aa):
MYRALRLLARSRRLLRVPSAGAAVSGEATTLPRCAPNVARMASQNSFRVEFDTFGELKVPTDKYYGAQTV
RSTMNFKIGGATERMPIPVIQAFGILKRAAAEVNQEYGLDPKIASAIMKAADEVAEGKLNDHFPLVVWQT
GSGTQTNMNVNEVISNRAIEMLGGELGSKKPVHPNDHVNKSQSSNDTFPTAMHIAAAVEVHKVLLPGLQK
LHDALSAKSKEFAQVIKIGRTHTQDAVPLTLGQEFSGYVQQVQYAMVRIKAAMPRIYELAAGGTAVGTGL
NTRIGFAEKVAAKVAALTGLPFVTAPNKFEALAAHDALVELSGAMNTAACSLMKIANDIRFLGSGPRSGL
GELILPENEPGSSIMPGKVNPTQCEAMTMVAAQVMGNHVAVTVGGSNGHFELNVFKPMMIKNVLHSARLL
GDASVSFTDNCVVGIQANTERINKLMNESLMLVTALNPHIGYDKAAKIAKTAHKNGSTLKETAIELGYLT
AEQFDEWVKPKDMLGPK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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