NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS16071.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
16071.1 Public Mus musculus 2 Grb14 23 108 98 CCDS HistoryNCBI Gene:50915Re-query CCDS DB by CCDS ID:16071.1Re-query CCDS DB by GeneID:50915See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 16071.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000028252.13 ENSMUSP00000028252.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000028252.13Link to Ensembl Protein Viewer:ENSMUSP00000028252.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000028252Re-query CCDS DB by Protein ID:ENSMUSP00000028252
Original member NCBI NM_016719.1 NP_057928.1 Updated not alive Link to Nucleotide Sequence:NM_016719.1Link to Protein Sequence:NP_057928.1Re-query CCDS DB by Nucleotide ID:NM_016719Re-query CCDS DB by Protein ID:NP_057928
Current member NCBI NM_016719.2 NP_057928.1 Accepted alive Link to Nucleotide Sequence:NM_016719.2Link to Protein Sequence:NP_057928.1Re-query CCDS DB by Nucleotide ID:NM_016719Re-query CCDS DB by Protein ID:NP_057928Link to BLAST:NP_057928.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057928.1 538 Q9JLM9 538 100% 0 0

Chromosomal Locations for CCDS 16071.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 64912707 64912853 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 64914716 64914809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 64916829 64916916 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 64917035 64917107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 64917199 64917315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 64923537 64923617 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 64929900 64929995 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 64930186 64930296 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 64933220 64933357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 64936417 64936491 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 64938369 64938490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 64953562 64953718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 65021087 65021219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 65022460 65022644 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1617 nt):
ATGACCACGTCCCTGCAAGACGGGCAGAGCGCCGCGGGCCGGGCAGGCGCCCAGGATTCGCCGCTGGCAG
TGCAGGTGTGCCGCGTTGCCCAGGGCAAGGGAGACGCCCAGGACCCGGCGCAGGTCCCCGGACTGCACGC
GCTGTCCCCCGCCTCCGATGCGACCCTCCGCGGTGCCATAGACAGGAGAAAAATGAAAGATCTGGATGTT
CTGGAAAAGCCACCCATTCCCAACCCCTTTCCTGAGCTCTGCTGCTCTCCGCTTACATCTGTGCTGTCAG
CAGGCCTGTTTCCCAGGGCCAATTCAAGGAAGAAGCAGGTGATTAAAGTTTACAGCGAGGATGAAACCAG
CAGAGCATTAGAGGTGCCCAGTGACATCACAGCCCGAGATGTTTGCCAGCTGTTGATCCTGAAGAACCAC
TATGTGGACGACAACAGCTGGACCCTTTTTGAGCACCTATCTCACATAGGTTTAGAAAGAACCGTAGAGG
ACCACGAGCTGCCAACTGAAGTGCTGTCTCACTGGGGAGTGGAAGAAGACAATAAGCTGTATCTTAGAAA
GAATTATGCCAAATATGAATTTTTTAAGAACCCAATGTATTTCTTTCCAGAGCACATGGTGTCTTTTGCA
GCTGAAATGAATGGTGACAGATCCCCTACACAGATACTGCAGGTGTTTTTAAGCTCCAGCACGTATCCTG
AAATCCATGGCTTCTTACATGCAAAGGAACAGGGAAAGAAGTCTTGGAAAAAAGCTTACTTTTTTCTCAG
AAGATCTGGCTTATATTTTTCTACTAAAGGCACATCCAAGGAACCACGGCATTTGCAGCTTTTCAGTGAA
TTCAGCACTAGTCACGTTTATATGTCACTGGCAGGAAAAAAAAAACACGGAGCGCCAACTCCCTATGGAT
TCTGCTTAAAGCCTAACAAAGCAGGAGGGCCCCGGGACCTGAAAATGCTCTGTGCAGAAGAAGAGCAGAG
CAGGACGTGCTGGGTGACCGCCATCCGACTGCTGAAGGATGGCATGCAGCTGTATCAGAATTATATGCAT
CCATACCAAGGTAGAAGCGCCTGCAATTCTCAGAGCATGTCACCCATGAGAAGCGTATCAGAGAATTCCC
TAGTAGCAATGGACTTCTCAGGTGAGAAGAGCAGAGTCATAGACAACCCCACTGAAGCGCTTTCGGTTGC
TGTTGAGGAAGGCCTCGCGTGGAGGAAAAAAGGCTGTTTACGCCTGGGGAATCACGGAAGCCCCAGTGCC
CCCTCCCAGAGCTCTGCTGTGAACATGGCTCTCCATCGGTCCCAACCATGGTTTCACCACAGAATTTCCA
GAGATGAGGCTCAGCGGCTGATCATTCGGCAGGGGCCTGTGGATGGAGTTTTCTTGGTACGGGATAGTCA
GAGTAACCCCAGAACTTTTGTACTGTCAATGAGTCATGGACAAAAGATAAAACACTATCAAATTATACCC
GTAGAAGATGATGGTGAGCTGTTCCATACTCTGGATGATGGCCATACGAAGTTCACAGACCTCATCCAGC
TGGTGGAGTTCTACCAGCTCAACAGGGGGGTCCTTCCTTGCAAGCTGAAGCATTACTGTGCTAGGATGGC
TGTTTAG

Translation (538 aa):
MTTSLQDGQSAAGRAGAQDSPLAVQVCRVAQGKGDAQDPAQVPGLHALSPASDATLRGAIDRRKMKDLDV
LEKPPIPNPFPELCCSPLTSVLSAGLFPRANSRKKQVIKVYSEDETSRALEVPSDITARDVCQLLILKNH
YVDDNSWTLFEHLSHIGLERTVEDHELPTEVLSHWGVEEDNKLYLRKNYAKYEFFKNPMYFFPEHMVSFA
AEMNGDRSPTQILQVFLSSSTYPEIHGFLHAKEQGKKSWKKAYFFLRRSGLYFSTKGTSKEPRHLQLFSE
FSTSHVYMSLAGKKKHGAPTPYGFCLKPNKAGGPRDLKMLCAEEEQSRTCWVTAIRLLKDGMQLYQNYMH
PYQGRSACNSQSMSPMRSVSENSLVAMDFSGEKSRVIDNPTEALSVAVEEGLAWRKKGCLRLGNHGSPSA
PSQSSAVNMALHRSQPWFHHRISRDEAQRLIIRQGPVDGVFLVRDSQSNPRTFVLSMSHGQKIKHYQIIP
VEDDGELFHTLDDGHTKFTDLIQLVEFYQLNRGVLPCKLKHYCARMAV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH