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Report for CCDS1662.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
1662.1 |
Public |
Homo sapiens |
2 |
ITGB1BP1 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:9270](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:1662.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:9270](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 2 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 1662.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000355346.9 |
ENSP00000347504.4 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000355346.9](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000347504.4](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000355346](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000347504](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000360635.7 |
ENSP00000353850.3 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000360635.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000353850.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000360635](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000353850](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001319066.2 |
NP_001305995.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001319066.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001305995.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001319066](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001305995](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001305995.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001319067.2 |
NP_001305996.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001319067.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001305996.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001319067](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001305996](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001305996.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001319068.2 |
NP_001305997.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001319068.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001305997.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001319068](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001305997](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001305997.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001369744.1 |
NP_001356673.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001369744.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001356673.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001369744](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001356673](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001356673.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001369745.1 |
NP_001356674.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001369745.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001356674.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001369745](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001356674](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001356674.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001369746.1 |
NP_001356675.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001369746.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001356675.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001369746](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001356675](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001356675.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001369748.1 |
NP_001356677.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001369748.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001356677.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001369748](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001356677](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001356677.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001369749.2 |
NP_001356678.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001369749.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001356678.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001369749](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001356678](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001356678.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_004763.5 |
NP_004754.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_004763.5](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_004754.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_004763](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_004754](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_004754.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 1662.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (603 nt): ATGTTTCGCAAGGGCAAAAAACGACACAGTAGTAGCAGTTCCCAAAGTAGCGAAATCAGTACTAAGAGCA AGTCTGTGGATTCTAGCCTTGGGGGTCTTTCACGATCCAGCACTGTGGCCAGCCTCGACACAGATTCCAC CAAAAGCTCAGGACAAAGCAACAATAATTCAGATACCTGTGCAGAATTTCGAATAAAATATGTTGGTGCC ATTGAGAAACTGAAACTCTCCGAGGGAAAAGGCCTTGAAGGGCCATTAGACCTGATAAATTATATAGACG TTGCCCAGCAAGATGGAAAGTTGCCTTTTGTTCCTCCGGAGGAAGAATTTATTATGGGAGTTTCCAAGTA TGGCATAAAAGTATCAACATCAGATCAATATGATGTTTTGCACAGGCATGCTCTCTACTTAATAATCCGG ATGGTGTGTTACGATGACGGTCTGGGGGCGGGAAAAAGCTTACTGGCTCTGAAGACCACAGATGCAAGCA ATGAGGAATACAGCCTGTGGGTTTATCAGTGCAACAGCCTGGAACAAGCACAAGCCATTTGCAAGGTTTT ATCCACCGCTTTTGACTCTGTATTAACATCTGAGAAACCCTGA
Translation (200 aa): MFRKGKKRHSSSSSQSSEISTKSKSVDSSLGGLSRSSTVASLDTDSTKSSGQSNNNSDTCAEFRIKYVGA IEKLKLSEGKGLEGPLDLINYIDVAQQDGKLPFVPPEEEFIMGVSKYGIKVSTSDQYDVLHRHALYLIIR MVCYDDGLGAGKSLLALKTTDASNEEYSLWVYQCNSLEQAQAICKVLSTAFDSVLTSEKP
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