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Report for CCDS17001.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
17001.1 |
Public |
Mus musculus |
2 |
Ptprt |
23 |
108 |
98 |
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Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 17001.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000109445.8 |
ENSMUSP00000105071.2 |
Accepted |
alive |
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NCBI |
NM_021464.5 |
NP_067439.1 |
Updated |
not alive |
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NCBI |
NM_021464.6 |
NP_067439.1 |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_067439.1 |
1435 |
Q99M80-4 |
1435 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 17001.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (4308 nt): ATGGGGAGCCTTGGCGGGCTCGCCCTCTGCCTGCTCCGGCTCCTGCTCCTGGGGCTGCAGCGGCCGCCGT TGCCCGGCGCCGGAGCGCAGAGCGCCGCAGGTGGCTGTTCTTTTGACGAACATTACAGCAACTGCGGGTA TAGCGTGGCTCTGGGAACCAATGGGTTTACCTGGGAGCAGATTAACACATGGGAGAAGCCAATGCTGGAC CCAGCTGTGCCCACAGGGTCCTTCATGATGGTGAACAGCTCTGGAAGGGCTTCAGGCCAGAAAGCCCATC TTCTTCTGCCAACCTTGAAGGAGAATGACACTCACTGCATTGACTTCCATTACTACTTCTCCAGTCGAGA TCGCTCCAGCCCGGGAGCCTTGAATGTCTACGTGAAGGTGAATGGTGGACCCCAAGGGAACCCTGTCTGG AACGTATCTGGCGTCGTCACTGAGGGCTGGGTGAAGGCAGAGCTTGCCATCAGCACCTTCTGGCCTCATT TCTATCAGGTGATATTTGAATCCGTCTCTTTGAAAGGTCATCCTGGTTACATCGCTGTGGACGAAGTTCG GGTCCTTGCTCATCCATGCAGAAAAGCACCTCATTTCCTGCGACTCCAAAACGTTGAGGTGAATGTGGGG CAGAACGCCACGTTTCAGTGCATTGCTGGTGGAAAGTGGTCCCAGCATGACAAACTTTGGCTCCAGCAAT GGAATGGCAGAGACACAGCCCTCATGGTCACCCGGGTGGTCAACCACAGACGCTTCTCAGCCACAGTGAG TGTGGCAGACACCTCTCAACGCAGTATCTCCAAGTATCGCTGCGTGATCCGCTCAGATGGTGGGTCTGGT GTGTCCAACTATGCAGAGCTGATTGTGAAAGAGCCTCCCACGCCCATTGCTCCCCCGGAACTACTGGCCG TGGGTGCCACCTACCTGTGGATTAAACCAAATGCCAACTCCATTATTGGGGATGGCCCCATCATACTGAA GGAGGTAGAATACCGCACAACCACAGGAACCTGGGCCGAGACCCACATCGTGGACTCTCCCAACTACAAG CTCTGGCATCTGGACCCTGATGTGGAGTATGAGATCCGGGTGCTGCTCACACGACCAGGAGAGGGGGGCA CAGGACCACCAGGACCACCCCTAACTACCAGGACCAAGTGTGCCGATCCCGTGCATGGCCCGCAGAATGT GGAGATTGTGGACATTCGGGCTCGGCAGCTGACCCTGCAGTGGGAACCCTTTGGCTATGCAGTGACCCGC TGCCACAGCTACAACCTCACAGTGCAGTACCAGTACGTGTTCAACCAGCAGCAGTATGAAGCTGAAGAGG TGATCCAGACATCTTCCCACTATACCCTTCGGGGTCTACGGCCCTTCATGACCATCAGACTGCGGCTGCT ACTGTCCAACCCTGAGGGCCGGATGGAGAGTGAGGAGTTGGTGGTACAGACAGAAGAGGATGTTCCAGGA GCTGTTCCTCTCGAGTCCATCCAAGGGGGTCCCTTTGAGGAGAAGATCTACATCCAGTGGAAACCTCCCA ATGAGACCAATGGGGTCATCACACTCTATGAGATTAACTACAAGGCTGTGGGCTCACTGGATCCAAGTGC TGACCTCTCCAGCCAGAGGGGAAAGGTGTTCAAACTCCGGAATGAAACCCACCACCTCTTTGTGGGTCTG TACCCTGGGACTACCTACTCTTTCACCATCAAGGCCAGCACAGCCAAGGGCTTTGGACCCCCAGTCACTA CTCGGATTGCCACCAAGATTTCAGCTCCATCAATGCCTGAATATGACGCAGATACCCCACTCAATGAAAC AGATACAACCATCACGGTGATGCTCAAACCCGCCCAGTCCAGGGGAGCCCCAGTCAGTGTTTACCAGCTG GTTGTCAAGGAGGAGCGACTCCAGAAGTCTCGGAGAGCAGCTGACATCATTGAGTGTTTCTCAGTACCTG TGAGCTACCGGAACGCCTCCAACCTCGATTCGCTACACTACTTTGCTGCTGAGCTGAAGCCCTCCAACCT GCCTGTCACCCAGCCATTTACAGTGGGAGACAACAAGACCTACAATGGCTACTGGAACCCTCCTCTCTCC CCATTGAAGAGCTACAGCATCTACTTCCAGGCCCTCAGCAAAGCAAATGGAGAGACAAAAATCAACTGTG TGCGTCTGGCTACAAAAGGTGCTTCCACTCAGAATTCTAACACTGTGGAGCCGGAGAAGCAGGTCGACAA CACGGTGAAGATGGCTGGCGTGATTGCTGGCCTCCTCATGTTCATCATCATTCTCCTGGGGGTGATGCTG ACCATCAAAAGGAGGAAGCTGGCTAAGAAGCAGAAGGAGACCCAGAGTGGAGCCCAGAGGGAGATGGGTC CTGTGGCCTCGACTGACAAGCCTACCGCCAAGCTCGGCACCAACCGCAATGATGAAGGCTTCTCCTCCAG CTCTCAGGATGTTAATGGATTCACAGATGGCAGCCGTGGGGAGCTGTCTCAGCCTACCCTCACCATTCAG ACTCATCCCTACCGGACTTGTGACCCTGTAGAGATGAGCTATCCCCGGGACCAGTTCCAGCCTGCCATCC GGGTGGCGGACCTGCTTCAACACATCACCCAGATGAAGAGAGGCCAGGGCTACGGGTTCAAGGAGGAATA CGAGGCCTTACCAGAAGGACAGACAGCTTCGTGGGACACAGCCAAGGAAGATGAAAACCGCAATAAGAAT CGATACGGAAACATCATATCTTATGACCACTCTCGAGTAAGGCTGTTGGTGCTGGATGGAGACCCTCACT CAGACTACATCAATGCCAACTACATTGACGGGTACCACCGACCCCGGCACTACATTGCAACCCAAGGTCC AATGCAAGAGACGGTGAAGGACTTTTGGAGAATGATCTGGCAGGAAAACTCTGCCAGCATCGTCATGGTC ACAAACCTTGTGGAAGTGGGCAGGGTGAAGTGTGTCCGATACTGGCCAGATGACACAGAGGTCTATGGAG ACATTAAAGTCACCCTAATAGAAACAGAGCCCCTGGCAGAATACGTCATCCGCACCTTCACAGTCCAGAA GAAAGGCTACCATGAGATCCGGGAGCTCCGCCTCTTCCACTTCACCAGCTGGCCTGACCACGGTGTTCCC TGCTATGCCACTGGCCTTCTGGGCTTTGTCCGCCAGGTCAAGTTTCTCAATCCCCCAGAAGCTGGGCCCA TAGTGGTCCATTGCAGTGCTGGAGCCGGGAGGACTGGCTGCTTCATTGCGATTGACACCATGCTCGACAT GGCTGAGAATGAAGGGGTTGTGGACATCTTCAACTGTGTGCGTGAGCTCCGGGCACAGAGGGTCAACCTG GTGCAGACAGAGGAGCAGTACGTGTTTGTGCACGATGCCATCCTGGAAGCATGCCTCTGCGGCAATACTG CCATCCCAGTGTGTGAGTTCCGCTCTCTCTACTACAACATCAGCAGGCTGGACCCGCAGACCAACTCCAG CCAGATCAAAGACGAGTTTCAGACACTCAACATTGTGACACCTCGAGTGCGGCCTGAAGACTGCAGCATT GGGCTCTTACCCCGGAACCATGATAAGAATCGGAGCATGGATGTCCTGCCTCTGGACCGCTGTCTACCCT TCCTCATCTCAGTAGATGGAGAGTCCAGCAACTACATCAATGCAGCACTGATGGATAGCCACAAGCAGCC TGCCGCCTTCGTGGTCACCCAGCATCCTCTACCCAACACGGTGGCAGACTTCTGGAGGCTGGTGTTTGAT TATAATTGTTCATCTGTGGTGATGCTGAACGAGATGGATACTGCTCAGCTCTGTATGCAGTACTGGCCTG AGAAGACCTCCGGGTGTTATGGTCCCATCCAGGTGGAGTTTGTCTCTGCAGACATCGATGAGGACATCAT CCACAGAATCTTCCGGATCTGTAACATGGCTCGGCCACAGGATGGTTATCGTATTGTCCAGCACCTCCAG TACATCGGCTGGCCTGCATACCGGGACACGCCCCCCTCTAAGCGCTCTCTGCTCAAAGTGGTCCGACGGC TGGAGAAATGGCAGGAGCAATACGACGGAAGAGAGGGGCGCACTGTGGTCCACTGCCTAAATGGGGGAGG CCGCAGTGGAACCTTCTGTGCTATCTGCAGTGTGTGTGAGATGATCCAGCAGCAGAACATTATTGACGTG TTCCACATTGTGAAAACCCTCCGCAACAACAAGTCCAACATGGTGGAGACGCTGGAACAGTATAAATTTG TATATGAGGTGGCACTGGAATATTTAAGCTCCTTTTAG
Translation (1435 aa): MGSLGGLALCLLRLLLLGLQRPPLPGAGAQSAAGGCSFDEHYSNCGYSVALGTNGFTWEQINTWEKPMLD PAVPTGSFMMVNSSGRASGQKAHLLLPTLKENDTHCIDFHYYFSSRDRSSPGALNVYVKVNGGPQGNPVW NVSGVVTEGWVKAELAISTFWPHFYQVIFESVSLKGHPGYIAVDEVRVLAHPCRKAPHFLRLQNVEVNVG QNATFQCIAGGKWSQHDKLWLQQWNGRDTALMVTRVVNHRRFSATVSVADTSQRSISKYRCVIRSDGGSG VSNYAELIVKEPPTPIAPPELLAVGATYLWIKPNANSIIGDGPIILKEVEYRTTTGTWAETHIVDSPNYK LWHLDPDVEYEIRVLLTRPGEGGTGPPGPPLTTRTKCADPVHGPQNVEIVDIRARQLTLQWEPFGYAVTR CHSYNLTVQYQYVFNQQQYEAEEVIQTSSHYTLRGLRPFMTIRLRLLLSNPEGRMESEELVVQTEEDVPG AVPLESIQGGPFEEKIYIQWKPPNETNGVITLYEINYKAVGSLDPSADLSSQRGKVFKLRNETHHLFVGL YPGTTYSFTIKASTAKGFGPPVTTRIATKISAPSMPEYDADTPLNETDTTITVMLKPAQSRGAPVSVYQL VVKEERLQKSRRAADIIECFSVPVSYRNASNLDSLHYFAAELKPSNLPVTQPFTVGDNKTYNGYWNPPLS PLKSYSIYFQALSKANGETKINCVRLATKGASTQNSNTVEPEKQVDNTVKMAGVIAGLLMFIIILLGVML TIKRRKLAKKQKETQSGAQREMGPVASTDKPTAKLGTNRNDEGFSSSSQDVNGFTDGSRGELSQPTLTIQ THPYRTCDPVEMSYPRDQFQPAIRVADLLQHITQMKRGQGYGFKEEYEALPEGQTASWDTAKEDENRNKN RYGNIISYDHSRVRLLVLDGDPHSDYINANYIDGYHRPRHYIATQGPMQETVKDFWRMIWQENSASIVMV TNLVEVGRVKCVRYWPDDTEVYGDIKVTLIETEPLAEYVIRTFTVQKKGYHEIRELRLFHFTSWPDHGVP CYATGLLGFVRQVKFLNPPEAGPIVVHCSAGAGRTGCFIAIDTMLDMAENEGVVDIFNCVRELRAQRVNL VQTEEQYVFVHDAILEACLCGNTAIPVCEFRSLYYNISRLDPQTNSSQIKDEFQTLNIVTPRVRPEDCSI GLLPRNHDKNRSMDVLPLDRCLPFLISVDGESSNYINAALMDSHKQPAAFVVTQHPLPNTVADFWRLVFD YNCSSVVMLNEMDTAQLCMQYWPEKTSGCYGPIQVEFVSADIDEDIIHRIFRICNMARPQDGYRIVQHLQ YIGWPAYRDTPPSKRSLLKVVRRLEKWQEQYDGREGRTVVHCLNGGGRSGTFCAICSVCEMIQQQNIIDV FHIVKTLRNNKSNMVETLEQYKFVYEVALEYLSSF
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