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Report for CCDS17863.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
17863.1 Public Mus musculus 3 Ddit4l 23 108 98 CCDS HistoryNCBI Gene:73284Re-query CCDS DB by CCDS ID:17863.1Re-query CCDS DB by GeneID:73284See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 17863.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000053855.7 ENSMUSP00000058896.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000053855.7Link to Ensembl Protein Viewer:ENSMUSP00000058896.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000053855Re-query CCDS DB by Protein ID:ENSMUSP00000058896
Original member Current member NCBI NM_030143.4 NP_084419.2 Accepted alive Link to Nucleotide Sequence:NM_030143.4Link to Protein Sequence:NP_084419.2Re-query CCDS DB by Nucleotide ID:NM_030143Re-query CCDS DB by Protein ID:NP_084419Link to BLAST:NP_084419.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_084419.2 193 Q8VHZ5 193 100% 0 0

Chromosomal Locations for CCDS 17863.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 3 (NC_000069.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 137624183 137624273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 137625966 137626456 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (582 nt):
ATGGTTGCAACGGGCAGTTTGAGCAGTAAGAACCCGGCCAGCATTTCAGAGTTGTTGGACGGTGGCTATC
ACCCTGGGAGTCTGCTAAGTGATTTCGACTACTGGGATTATGTTGTCCCTGAGCCCAACCTCAACGAGGT
GGTATTTGAAGAGACAACATGCCAGAATTTGGTTAAAATGTTGGAGAACTGTCTGTCCAGATCAAAGCAA
ACCAAACTTGGTTGCTCTAAGGTCTTGGTCCCTGAGAAACTGACCCAGAGAATTGCTCAAGATGTCCTGC
GGCTCTCGTCCACGGAGCCCTGCGGCCTTCGGGGTTGTGTTATGCACGTGAACTTGGAGATTGAAAATGT
ATGTAAAAAGCTGGATAGGATCGTGTGTGATGCTAGCGTGGTGCCGACCTTTGAGCTCACGCTTGTGTTT
AAGCAGGAGAGCTGCCCGTGGACCAGCCTCAAGGACTTCTTCTTTAGCAGAGGTCGCTTCTCCTCAGGCC
TTAAGCGAACTCTGATTCTCAGCTCAGGATTTCGACTTGTGAAGAAAAAACTGTACTCCCTGATTGGAAC
GACAGTCATTGAAGAGTGCTAA

Translation (193 aa):
MVATGSLSSKNPASISELLDGGYHPGSLLSDFDYWDYVVPEPNLNEVVFEETTCQNLVKMLENCLSRSKQ
TKLGCSKVLVPEKLTQRIAQDVLRLSSTEPCGLRGCVMHVNLEIENVCKKLDRIVCDASVVPTFELTLVF
KQESCPWTSLKDFFFSRGRFSSGLKRTLILSSGFRLVKKKLYSLIGTTVIEEC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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