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Report for CCDS18462.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
18462.1 Public Mus musculus 4 Eps15 23 108 98 CCDS HistoryNCBI Gene:13858Re-query CCDS DB by CCDS ID:18462.1Re-query CCDS DB by GeneID:13858See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 18462.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000102729.9 ENSMUSP00000099790.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000102729.9Link to Ensembl Protein Viewer:ENSMUSP00000099790.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000102729Re-query CCDS DB by Protein ID:ENSMUSP00000099790
Original member Current member NCBI NM_007943.3 NP_031969.1 Accepted alive Link to Nucleotide Sequence:NM_007943.3Link to Protein Sequence:NP_031969.1Re-query CCDS DB by Nucleotide ID:NM_007943Re-query CCDS DB by Protein ID:NP_031969Link to BLAST:NP_031969.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031969.1 897 P42567-1 897 100% 0 0

Chromosomal Locations for CCDS 18462.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 109280412 109280444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 109297187 109297228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 109304751 109304840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 109305677 109305724 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 109309125 109309220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 109312304 109312369 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 109312878 109313003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 109315845 109315904 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 109321128 109321217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 109322070 109322215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 109324068 109324224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 109329692 109329777 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 109343284 109343356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 109361163 109361324 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 109361670 109361867 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 109363179 109363379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 109366124 109366240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 109366418 109366508 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 109368945 109368980 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 109370542 109370678 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 109373223 109373292 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 109378265 109378341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 109379867 109380029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 109382785 109382966 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 109385319 109385465 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2694 nt):
ATGGCTGCGGCAGCCCAGCTCTCCCTGACACAGTTGTCAAGTGGGAATCCTGTATATGAAAAATACTACA
GACAGGTTGAGGCAGGCAATACTGGAAGGGTGTTGGCGTTAGATGCTGCTGCATTCCTGAAAAAGTCAGG
GCTTCCAGACTTGATTCTTGGAAAGATTTGGGATTTAGCTGACACAGATGGCAAAGGTGTCCTGAGCAAA
CAAGAATTCTTTGTTGCTTTACGGCTTGTGGCATGTGCTCAGAATGGACTGGAAGTTTCACTGAGTAGCC
TAAGTCTGGCTGTTCCTCCACCAAGATTTCATGACTCCAGCAGTCCGTTGCTAACCAGTGGGCCCTCAGT
TGCTGAGCTCCCGTGGGCTGTAAAGTCTGAAGATAAAGCCAAATATGATGCAATTTTTGACAGTTTAAGC
CCAGTGGATGGATTTTTGTCTGGTGATAAAGTGAAACCAGTGTTGCTCAACTCTAAGTTACCTGTGGAAA
TCCTTGGAAGAGTTTGGGAGTTGAGTGATATTGACCACGATGGAAAGCTGGACAGAGATGAGTTTGCAGT
TGCCATGTTTTTGGTATACTGTGCACTGGAGAAAGAACCTGTGCCAATGTCCTTGCCTCCAGCCTTGGTG
CCACCTTCTAAGAGAAAAACGTGGGTTGTATCCCCTGCAGAAAAAGCTAAATATGATGAAATTTTTCTGA
AAACTGATAAGGATATGGATGGATATGTGTCTGGACTGGAGGTCCGTGAAACCTTCCTGAAAACAGGTTT
ACCTTCTGCCTTGCTAGCCCACATTTGGTCACTATGTGACACAAAGGGCTGTGGGAAGCTTTCAAAAGAC
CAGTTTGCCTTGGCTTTTCACTTAATCAATCAGAAGTTAATAAAAGGCATTGACCCTCCTCATAGTCTCA
CTCCTGAGATGATTCCACCATCAGACAGATCCAGTTTACAAAAGAACATCACAGGATCAAGTCCTGTTGC
AGATTTTTCTGCTATTAAGGAACTAGATACCCTTAACAATGAAATAGTTGACCTGCAGAGGGAAAAGAAC
AATGTGGAGCAGGACCTTAAAGAGAAGGAAGACACAGTTAAGCAGAGGACCAGTGAGGTTCAGGATCTTC
AAGATGAAGTTCAAAGGGAGAGTATTAATCTACAAAAACTGCAGGCCCAGAAGCAGCAGGTGCAGGAGCT
CCTGGGTGAACTGGATGAGCAGAAAGCCCAGCTGGAGGAGCAGCTCCAGGAAGTCAGGAAAAAGTGTGCT
GAGGAGGCCCAGCTGATTTCTTCCCTGAAAGCAGAAATAACTAGTCAAGAATCTCAGATCTCCAGTTATG
AGGAAGAACTGTTGAAAGCTAGAGAAGAACTAAGTCGCCTACAACAAGAAACAGCACAATTGGAAGAAAG
TGTGGAGTCAGGGAAGGCTCAGCTGGAACCTCTTCAGCAGCACCTACAAGAGTCACAACAGGAAATCAGC
TCAATGCAAATGAGATTGGAAATGAAAGATCTGGAAACTGATAATAACCAATCAAATTGGAGCAGTAGCC
CACAAAGCGTTCTTGTTAATGGTGCTACAGATTACTGTAGCCTCAGCACCAGCAGCAGTGAAACAGCCAA
CTTCAACGAACATGCTGAAGGCCAAAACAACCTAGAGTCTGAACCCACACACCAGGAGTCCTCAGTAAGA
AGTAGTCCTGAAATCGCACCTTCTGATGTGACTGATGAAAGTGAGGCTGTGACTGTGGCTGGTAATGAGA
AAGTTACTCCGAGATTTGACGATGACAAGCACTCAAAAGAGGAAGATCCATTTAATGTAGAATCAAGTTC
ACTGACAGATGCAGTTGCAGATACAAACTTGGATTTTTTCCAGTCTGATCCTTTTGTTGGCAGTGATCCT
TTCAAGGATGATCCTTTTGGAAAAATTGATCCATTTGGTGGTGACCCTTTCAAAGGCTCAGATCCTTTTG
CGTCTGATTGCTTCTTTAAGCAGACTTCTACTGATCCTTTTACCACTTCAAGTACGGACCCTTTCAGTGC
ATCCAGCAACAGCAGTAATACATCGGTAGAAACTTGGAAGCACAATGACCCATTTGCTCCTGGTGGAACA
GTTGTTGCTGCAGCGAGTGATTCAGCCACAGACCCTTTTGCTTCTGTTTTCGGAAATGAATCATTTGGAG
ATGGATTTGCTGACTTCAGCACATTATCAAAGGTCAACAATGAAGATGCTTTTAATCCTACCATATCAAG
TTCTACCAGCAGTGTGACCATTGCAAAACCTATGTTAGAGGAAACAGCCAGCAAGAGTGAAGATGTGCCT
CCAGCACTGCCGCCCAAAGTTGGCACTCCAACAAGACCTTGCCCGCCACCCCCTGGGAAAAGACCCATCA
ACAAATTGGATTCTTCTGATCCCCTTAAACTGAATGATCCATTTCAGCCTTTCCCAGGCAATGATAGTCC
CAAAGAAAAAGATCCTGATATGTTTTGTGATCCATTCACTTCTTCTACCACTACCAATAAAGAGGCTGAC
CCAAGCAATTTTGCTAACTTCAGTGCTTATCCCTCTGAAGAAGATATGATTGAATGGGCAAAAAGGGAAA
GTGAGCGGGAAGAAGAACAGAGGCTTGCCAGACTAAATCAGCAGGAGCAAGAAGACTTGGAACTGGCCAT
TGCACTTAGCAAATCTGAGATCTCAGAAGCATGA

Translation (897 aa):
MAAAAQLSLTQLSSGNPVYEKYYRQVEAGNTGRVLALDAAAFLKKSGLPDLILGKIWDLADTDGKGVLSK
QEFFVALRLVACAQNGLEVSLSSLSLAVPPPRFHDSSSPLLTSGPSVAELPWAVKSEDKAKYDAIFDSLS
PVDGFLSGDKVKPVLLNSKLPVEILGRVWELSDIDHDGKLDRDEFAVAMFLVYCALEKEPVPMSLPPALV
PPSKRKTWVVSPAEKAKYDEIFLKTDKDMDGYVSGLEVRETFLKTGLPSALLAHIWSLCDTKGCGKLSKD
QFALAFHLINQKLIKGIDPPHSLTPEMIPPSDRSSLQKNITGSSPVADFSAIKELDTLNNEIVDLQREKN
NVEQDLKEKEDTVKQRTSEVQDLQDEVQRESINLQKLQAQKQQVQELLGELDEQKAQLEEQLQEVRKKCA
EEAQLISSLKAEITSQESQISSYEEELLKAREELSRLQQETAQLEESVESGKAQLEPLQQHLQESQQEIS
SMQMRLEMKDLETDNNQSNWSSSPQSVLVNGATDYCSLSTSSSETANFNEHAEGQNNLESEPTHQESSVR
SSPEIAPSDVTDESEAVTVAGNEKVTPRFDDDKHSKEEDPFNVESSSLTDAVADTNLDFFQSDPFVGSDP
FKDDPFGKIDPFGGDPFKGSDPFASDCFFKQTSTDPFTTSSTDPFSASSNSSNTSVETWKHNDPFAPGGT
VVAAASDSATDPFASVFGNESFGDGFADFSTLSKVNNEDAFNPTISSSTSSVTIAKPMLEETASKSEDVP
PALPPKVGTPTRPCPPPPGKRPINKLDSSDPLKLNDPFQPFPGNDSPKEKDPDMFCDPFTSSTTTNKEAD
PSNFANFSAYPSEEDMIEWAKRESEREEEQRLARLNQQEQEDLELAIALSKSEISEA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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