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Report for CCDS18744.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
18744.1 |
Public |
Mus musculus |
4 |
Map3k6 |
23 |
108 |
98 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:53608](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:18744.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:53608](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 4 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 18744.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000030677.6 |
ENSMUSP00000030677.6 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000030677.6](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000030677.6](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000030677](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000030677](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_016693.5 |
NP_057902.5 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_016693.5](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_057902.5](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_016693](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_057902](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_057902.5](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_057902.5 |
1291 |
Q9WTR2 |
1291 |
99.5352% |
0 |
6 |
Chromosomal Locations for CCDS 18744.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (3876 nt): ATGGCGGGGCCATGTCCTGGGGCCGGGGTTCTAGAACGGGCGGGCAGCTGCTGGCAGGACCCGCTGGCGG AGGCGCTGAGCCGGGGCCGCTCGTCTCCTGCGGTCACGGGTCGGGGCTGCGCGCGGAGCCGGCCTCTCAG TGTGGTCTACGTGCTGACCCGGGAGCCGGGGCTCGGGGTGGAGCCCGGGTCGGGAACCGAGGCAGAGCCG CTGCCGTTGCGATGCCTGCGCGAGGCCTGCGCTCAGCTCCAGGGCACACGGCCACCCCCGCAGCTACGCA GCCTACCCTTTGCGACGCTGGCGCTAGGCGACACCGCTGCGCTGGACTCCTTCTACAACGCGGATGTAGT GGTGCTGGAGGTGAGCAGCTCCCTGGCACAGCCTTCCTTGTTCTACCACCTCGGCGTGCGTGAGAGCTTC AGCATGACCAACAACGTGCTCCTCTGTTCCCAGGCAGAGCTCCCTGATCTGCAGGCCCTTCGTGAGGATG TTTTCCAGAAGAACTCGGATTGTGTTGGCAGCTACACACTGATTCCTTATGTGGTGACAGCCACTGGCCG GGTCTTATGTGGCGATGCAGGCCTCCTGAGGGGCATAGCCGATGGGCTAGTACAGGCTGGGGCGGGCACT GAAGCCCTCCTCACTCCCCTGGTGGGCCGGCTTGTCCGTCTGTTGGAGGCTACACCCACAGACTCTTGCG GCTATTTCCGGGAGACCATTCGTCAGGATATCCGGCAGGCTCGGGAGCGATTCAGTGGGCAGCAGCTGAG GCAGGAGCTGGCTCGCCTGCAGCGGAGGCTGGACAGCGTGGAGCTGCTGAGCCCTGACATTGTCATGAAT CTGCTGCTATCGTACCGTGATGTCCAGGACTACTCGGCCATCATTGAGCTGGTGGAGACGCTGCAGGCTT TGCCCACCTGTGATGTGGCTGAACAGCACAATGTCTGCTTTCACTACACATTTGCCCTCAACAGGAGGAA CAGGCCTGGGGACCGGGAGAAAGCCCTGGCTGTCCTGCTGCCATTGGTGAAGTATGAAGGTCCCGTGGCT CCGGATCTGTACTGCATGTGTGGTCGTATCTACAAGGACATGTTCTTCACTTCTGGCTTCCAAAATGCCG GCCACCTGGAGCAGGCCTATCACTGGTACCGCAAGGCGTTTGATGTGGAGCCCAGCCTGCACTCAGGCAT CAATGCAGCTGTTCTCCTCATTGCAGCTGGGCAGCATTTCGAAGACTCTGAGGAGCTCCGGCTGATTGGC ATGAAGCTGGCCTGCCTGCTAGCCCGCAAAGGCTGTGTGGAGAAGATGCAGTACTACTGGGATGTGGGAT TCTACCTGGGAGCCCAGATTCTTGCCAACGACCCCATCCAGGTGGTGCTGGCTGCAGAGCAACTGTACAA GCTTAATGCCCCCATTTGGTACTTGGTCTCCGTGATGGAGACCTTCCTACTGTACCAGCATTTCAGACCC ACACCAGAGCCCTCAGGAGGACCCCCGCTGCGAGCTCACTTCTGGCTCCACTTCCTGCTACAATCTTGCC AGCCTTTCAAGATGGCTCCTCCTCAGGAGGACCAGTGCCTGGTACTGGTGCTGGAGATAAACAAGGTCCT GCTGCCTGCCAGGCTTGAGATTCAGGGAACAGACCCCGTGAGCACAGTGACCCTAAGCTTGCTGGACCCA GAGACTCAGGAGGATCCTTCCAGCTGGACCTTCCCAGTCACCTCCATCTGTGGGATCAGCACCTCCAAGC TGGACCAGCGCTGCTGCTTCCTGTACGCACTTCCTCCGGCCCAGGACGTCCAGCTGTGCTTTCCCAGTGT GGAGCGCTGCCAGCGGTTCTGTGGCCTAATTCAGGTCTTGGTGATGAATCCGGATTCCTCCGCGCCCACT GAGGAGGCAGAAGGCGCAAGGGAGGTGCTGGAGTTTGATTATGAATACTCGGAGACTGGTGAGCGGCTGG TGTTGGGCAGAGGCACGTATGGGGTGGTGTATGCTGGCCGAGACAGGCACACGAGGGTACGAATCGCCAT CAAGGAGATCCCAGAGAGAGATAGCAGATTCTCTCAGCCTCTGCATGAAGAGATCGCTCTTCACAAACGA CTTCGTCATAAGAATATTGTGCGTTATCTGGGCTCAGCCAGCCAGGGCGGCTACCTCAAGATCTTCATGG AGGAAGTGCCTGGAGGCAGCCTGTCCTCCTTGCTTAGGTCAGTGTGGGGACCCCTAAAGGACAACGAGAG CACTATTAGCTTCTATACACGTCAGATCCTACAAGGACTCAGCTACCTCCATGAGAACCGTATCGTTCAC AGAGACATCAAGGGAGACAATGTTCTGATCAACACCTTCAGTGGGCTGCTCAAGATTTCTGACTTTGGCA CCTCTAAGCGGCTGGCAGGCATCACACCGTGCACGGAGACTTTCACAGGGACTCTGCAGTATATGGCCCC GGAAATCATCGACCAGGGCCCGCGAGGATATGGGAAGGCAGCTGACATCTGGTCTCTGGGCTGCACTGTA ATCGAGATGGCAACAGGTCGACCGCCCTTCCATGAACTAGGGAGCCCTCAGGCTGCGATGTTTCAGGTGG GCATGTACAAGGTACATCCACCCGTGCCCGGTTCCCTGTCAGCTGAGGCCCAAGCCTTCCTCCTCCGAAC TTTTGAGCCAGATCCCCGCCTCCGAGCCAGTGCCCAAGAGCTGCTGGGAGACCCCTTCCTTCAGCCAGGA AAGAGGAGCCGCAGCCCGGGCTCTCCTCGGCATACTCCCCGGCCCTCAGGCGCCCCTTCCGGTCCTTCCA GTCCTTCAGCTGACTCAGCCACACAGTCTCAGACATTCCCAAGGCCCCAGGCACCCTCTCAGCACCCACC CAGCCCCCCAAAGCGCTGCCTTAGTTATGGGGACACCAGTCAGCTCCGTGTGCCCGAGGAGCCCGCTGCC GAGGAACCCGCGTCCCCAGAAGAGAGTTCAGGCCTGAGTCTGCTGCACCAGGAGAGCAAGCGCCGGGCCA TGCTGGCTGCGGTGCTGGAACAGGAGGTGCCCACACTAGCAGAGAATCTCCTGGAACAGGAACAGGACTC TCGACTCAGCAAGATTCATGTGGAACTTCTGCTTCGGTGCCTTGGGGCACAAATCCACACTCCTAACCGC CGGCAGCTGGCCCAGGAGCTGCGGACCCTGCAAGCTCAGCTGCGGGCCCAGAGCCTGGGCCCTGCGCTTT TGAAGGGGCCGCTCTTCGCCTTTCCAGACGCGGTGAAGCAGATCCTCCGCAGACGCCAGATCCGCCCACA CTGGATGTTCGTGTTGGACTCGCTGCTCAGCCGTGCAGTCCGGGCGGCGATGGCGGTGCTGGACGCGGAG TCGGAGAAGAAAGCGGTCTTACCGAGGTCAGAAGAGTCGAGTAAAGAGGAGTCCCAGCAGAAACCTCAGG AGAGCCAGGCGCTGCAGAGCCAGCTCCCACCAGAGCAGGGACCCCCATCGTTGATGGTGGAGTTGGGCCT TTTGCGAGCCGAGACTGACAGGCTTCGGGACCTTCTGGCTGAGAAGGAACGTGAGTGCCAGGCGCTGGTG CAACAGGCCCTGCATCGGGTGCATGCAGAGACCAGGAAGTATGCCCCAGCTTCAGAGACCCCAGCCACTC TCCCAAAGGACCAGAACCTGGTGCGGTGGCTACAGGAACTGAGTGTAGATCCAGCCACTATCCAAACGCT CCTGAGTCATAGCTTCACCCTTCAAACCCTGCTCACCTGTGCCACTCAAGATGATCTAGTGTACACCAGA ATCAGGGGAGGGATGGTATGCCGGATTTGGAGAGCCATCTTGGCACAGCGAGCAGGAGCCACATCGGTCA CCCCAGTACCCCGGGACGCTGAGTGA
Translation (1291 aa): MAGPCPGAGVLERAGSCWQDPLAEALSRGRSSPAVTGRGCARSRPLSVVYVLTREPGLGVEPGSGTEAEP LPLRCLREACAQLQGTRPPPQLRSLPFATLALGDTAALDSFYNADVVVLEVSSSLAQPSLFYHLGVRESF SMTNNVLLCSQAELPDLQALREDVFQKNSDCVGSYTLIPYVVTATGRVLCGDAGLLRGIADGLVQAGAGT EALLTPLVGRLVRLLEATPTDSCGYFRETIRQDIRQARERFSGQQLRQELARLQRRLDSVELLSPDIVMN LLLSYRDVQDYSAIIELVETLQALPTCDVAEQHNVCFHYTFALNRRNRPGDREKALAVLLPLVKYEGPVA PDLYCMCGRIYKDMFFTSGFQNAGHLEQAYHWYRKAFDVEPSLHSGINAAVLLIAAGQHFEDSEELRLIG MKLACLLARKGCVEKMQYYWDVGFYLGAQILANDPIQVVLAAEQLYKLNAPIWYLVSVMETFLLYQHFRP TPEPSGGPPLRAHFWLHFLLQSCQPFKMAPPQEDQCLVLVLEINKVLLPARLEIQGTDPVSTVTLSLLDP ETQEDPSSWTFPVTSICGISTSKLDQRCCFLYALPPAQDVQLCFPSVERCQRFCGLIQVLVMNPDSSAPT EEAEGAREVLEFDYEYSETGERLVLGRGTYGVVYAGRDRHTRVRIAIKEIPERDSRFSQPLHEEIALHKR LRHKNIVRYLGSASQGGYLKIFMEEVPGGSLSSLLRSVWGPLKDNESTISFYTRQILQGLSYLHENRIVH RDIKGDNVLINTFSGLLKISDFGTSKRLAGITPCTETFTGTLQYMAPEIIDQGPRGYGKAADIWSLGCTV IEMATGRPPFHELGSPQAAMFQVGMYKVHPPVPGSLSAEAQAFLLRTFEPDPRLRASAQELLGDPFLQPG KRSRSPGSPRHTPRPSGAPSGPSSPSADSATQSQTFPRPQAPSQHPPSPPKRCLSYGDTSQLRVPEEPAA EEPASPEESSGLSLLHQESKRRAMLAAVLEQEVPTLAENLLEQEQDSRLSKIHVELLLRCLGAQIHTPNR RQLAQELRTLQAQLRAQSLGPALLKGPLFAFPDAVKQILRRRQIRPHWMFVLDSLLSRAVRAAMAVLDAE SEKKAVLPRSEESSKEESQQKPQESQALQSQLPPEQGPPSLMVELGLLRAETDRLRDLLAEKERECQALV QQALHRVHAETRKYAPASETPATLPKDQNLVRWLQELSVDPATIQTLLSHSFTLQTLLTCATQDDLVYTR IRGGMVCRIWRAILAQRAGATSVTPVPRDAE
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