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Report for CCDS20166.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20166.1 Public Mus musculus 6 Adcyap1r1 23 108 98 CCDS HistoryNCBI Gene:11517Re-query CCDS DB by CCDS ID:20166.1Re-query CCDS DB by GeneID:11517See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 20166.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000070756.11 ENSMUSP00000066902.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000070756.11Link to Ensembl Protein Viewer:ENSMUSP00000066902.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000070756Re-query CCDS DB by Protein ID:ENSMUSP00000066902
Original member Current member NCBI NM_001025372.2 NP_001020543.1 Accepted alive Link to Nucleotide Sequence:NM_001025372.2Link to Protein Sequence:NP_001020543.1Re-query CCDS DB by Nucleotide ID:NM_001025372Re-query CCDS DB by Protein ID:NP_001020543Link to BLAST:NP_001020543.1

Chromosomal Locations for CCDS 20166.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 55460236 55460286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 55461509 55461614 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 55472220 55472327 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 55474560 55474580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 55475467 55475508 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 55478082 55478191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 55478679 55478776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 55479165 55479297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 55479955 55480108 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 55480424 55480484 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 55481100 55481169 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 55484942 55485033 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 55494077 55494206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 55495574 55495615 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 55496983 55497171 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1407 nt):
ATGGCCAGAACCCTGCAGCTCTCCCTGACTGCTCTCCTCCTGCTGCCTATGGCTATTGCTATGCACTCTG
ACTGCATCTTCAAGAAGGAGCAAGCCATGTGCCTGGAGAGGATCCAGAGGGCCAACGACCTGATGGGCCT
AAATGAGTCTTCCCCAGGTTGCCCTGGCATGTGGGACAATATCACATGTTGGAAGCCTGCTCAAATAGGT
GAGATGGTCCTTGTGAGCTGCCCTGAGGTCTTCCGGATCTTCAACCCGGACCAAGTCTGGATGACAGAAA
CCATAGGGGATTCTGGCTTTGCTGATAGTAATTCCTTGGAGATCACAGACATGGGGGTCGTGGGCCGGAA
CTGCACTGAGGATGGCTGGTCGGAGCCCTTCCCCCATTACTTCGATGCTTGTGGGTTTGATGACTATGAG
CCCGAGTCTGGGGATCAGGATTATTACTACCTGTCGGTGAAGGCCCTCTACACAGTCGGCTACAGCACCT
CCCTCGTCACCCTCACCACTGCCATGGTCATCTTGTGCCGCTTCCGGAAGCTGCACTGTACCCGTAACTT
CATCCACATGAACCTGTTTGTATCCTTCATGCTGAGAGCTATCTCTGTCTTCATCAAAGACTGGATCTTG
TATGCCGAGCAGGACAGCAGTCATTGCTTCGTTTCCACCGTGGAATGCAAAGCTGTCATGGTTTTCTTTC
ACTACTGCGTGGTGTCCAACTACTTCTGGCTGTTCATTGAAGGCCTATACCTCTTTACACTGCTGGTGGA
GACCTTCTTCCCTGAGAGGAGATATTTCTACTGGTATACCATCATTGGCTGGGGGACACCTACTGTGTGT
GTAACTGTGTGGGCTGTGCTGAGGCTCTACTTTGATGATGCGGGATGCTGGGATATGAATGACAGCACAG
CTCTGTGGTGGGTGATCAAAGGCCCTGTAGTTGGCTCTATAATGGTTAACTTTGTGCTTTTCATCGGCAT
CATCATCATCCTTGTGCAGAAGCTGCAGTCCCCAGACATGGGAGGCAATGAGTCGAGCATCTACTTACGG
CTGGCCCGCTCCACCCTGCTGCTCATCCCACTCTTTGGAATCCACTACACAGTATTTGCCTTCTCTCCAG
AGAACGTCAGCAAGAGGGAAAGACTTGTGTTTGAGCTTGGGCTGGGCTCCTTCCAGGGCTTTGTGGTGGC
TGTACTCTACTGCTTCCTGAATGGGGAGGTACAGGCAGAGATTAAGAGGAAATGGAGGAGCTGGAAGGTG
AACCGTTACTTCACTATGGACTTCAAGCACCGGCATCCATCCCTGGCCAGCAGTGGAGTGAACGGGGGCA
CCCAGCTGTCCATCCTGAGCAAGAGCAGCTCCCAGCTCCGCATGTCCAGCCTCCCGGCCGACAACTTGGC
CACCTGA

Translation (468 aa):
MARTLQLSLTALLLLPMAIAMHSDCIFKKEQAMCLERIQRANDLMGLNESSPGCPGMWDNITCWKPAQIG
EMVLVSCPEVFRIFNPDQVWMTETIGDSGFADSNSLEITDMGVVGRNCTEDGWSEPFPHYFDACGFDDYE
PESGDQDYYYLSVKALYTVGYSTSLVTLTTAMVILCRFRKLHCTRNFIHMNLFVSFMLRAISVFIKDWIL
YAEQDSSHCFVSTVECKAVMVFFHYCVVSNYFWLFIEGLYLFTLLVETFFPERRYFYWYTIIGWGTPTVC
VTVWAVLRLYFDDAGCWDMNDSTALWWVIKGPVVGSIMVNFVLFIGIIIILVQKLQSPDMGGNESSIYLR
LARSTLLLIPLFGIHYTVFAFSPENVSKRERLVFELGLGSFQGFVVAVLYCFLNGEVQAEIKRKWRSWKV
NRYFTMDFKHRHPSLASSGVNGGTQLSILSKSSSQLRMSSLPADNLAT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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