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Report for CCDS21074.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21074.1 Public Mus musculus 7 Zfp84 23 108 98 CCDS HistoryNCBI Gene:74352Re-query CCDS DB by CCDS ID:21074.1Re-query CCDS DB by GeneID:74352See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21074.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000032802.4 ENSMUSP00000032802.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000032802.4Link to Ensembl Protein Viewer:ENSMUSP00000032802.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000032802Re-query CCDS DB by Protein ID:ENSMUSP00000032802
Original member Current member NCBI NM_023750.2 NP_076239.1 Accepted alive Link to Nucleotide Sequence:NM_023750.2Link to Protein Sequence:NP_076239.1Re-query CCDS DB by Nucleotide ID:NM_023750Re-query CCDS DB by Protein ID:NP_076239Link to BLAST:NP_076239.1

Chromosomal Locations for CCDS 21074.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 29771371 29771403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 29775338 29775464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 29775905 29775991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 29776132 29777564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1680 nt):
ATGGCCGTTGTGGACGTCAGCACCGTGTTTAAGGAGTTGGTGGTGTTCAGGGACGTGGCTGTGGAGTTCT
GTAAGGAGGAGTGGGAGTGTCTGGGCCCTGAGCAGAGGTCGCTATACAGAGATGTGATGCTGGAGAACTA
CAGCAACTTTGTGTCGCTGGGACTTGCCATTTCTAAGCCATCAATAATTTCACTGCTGGAGCAAGGCAAA
GAGCCCTGGATAGTGGAGCAAGCAGGATGGTGCCCAGATCTGCTGTCTGTAAATGAAGCTAAGAGTTTGT
CTCTAAAGAATGGCATCTTTGGAAAGGAATCGTTAAAATGGAAAATAATAGAAAGAGTTGGTAGTTCTTG
CCTTGAGGAATCTTGTTTTGGAGATGATTGGAAATGCAAGGGACTCCTTGAGACAAAACGGGAATCTACA
GAGGAATATTTACAGGGAGTGACAGACCCGTTGGAAGAGACGTCAGCCAGATTCGTTCAGCCTGCACCCA
TTGCTCTGAGTGAAGTGACGCATTCCGAAACGAAACTCTCTGAGCAGGACGCAGGCGAAACCATCACTCA
ACAGGTGCGAATTCCTACCAGTGACAAACTTAATGAAATGTACGAGAATGCCTTTATCTATTACACAGGT
GAGATGAAGCGTCAGCAGGACTTTGCTGGGGACAGATGTGATGAGCTAAAGGCGTGCAGCAGAGGATTCG
CCTATGACTTTCAGCTCGCCCCGTATCAGATCAACAAGAAGCCCTACCAGTGCGAGATCTGTGGCAAGAT
CTTTGAGAAGCACGCTTACCTTGTTCAGCATAACCGCTTTCACACGGGGGAGAAACCCTGCGAATGTAAG
GAGTGCGGGAAAGCCTTCACCAACTGCTCGCTGCTCGTCCAGCACCAGAGGGTCCACACGGACGAGAAGC
CCTACGAGTGCAAGCACTGTGGGAAGGCCTTCCTCTACTTCTCCACGTTTTTTCAGCATCAGAGAACCCA
CACCAACGAGAAGCCATACGAATGCCACAAATGTCAGAAGGCCTTTAACAAGAGTGCCAACCTCACTAGA
CATCAAAGGATCCACAGCGGCGAGAAACCCTACGAGTGTAACTTATGCGGAAAGACCTTCACTTGGGCTT
CCAACCTGAATGATCACCAAAAGATTCACACCGGCGAAAAACCTTACGAGTGTAACTACTGCGAAAAGGC
CTTTCTCTGCCATTCGGCCTTCATGAAACACTATAGAACTCACACAAACGAGAAGCCCTACGAGTGCCAG
GAGTGTATGAAGGCCTTCCGGCAGAAAGCCCATCTCATCCAGCATCAGCGAGTCCACACTGGCGAAAAAC
CTTACGAATGTAAGGAGTGTGGGAAGGCCTTCGCGTGTCCTTCCTACTTTAACAGACACCAGAGGATTCA
CACTGGAGAGAGGCCTTATGAGTGTAAAGAGTGTGGGAAGGCTTTCATTGATTGTAAAACTCTCATTCTG
CACCAGAGGATCCACACTGGCGAGAAGCCCTTCCAGTGCCAGCAGTGTAGCAAGGCCTTCAGGCAGAGGT
CCCACCTGACGCAGCATCAGAGGATCCACACTGGCGAGAAGCCCTACGAGTGTAAGGAGTGCGGGCAGGC
CTTCACTCGGCTCTTACAGGTGAAGAAACACCAGAGAGTCCACACGGTGGGGGAAATCCTGTGTATCTGA

Translation (559 aa):
MAVVDVSTVFKELVVFRDVAVEFCKEEWECLGPEQRSLYRDVMLENYSNFVSLGLAISKPSIISLLEQGK
EPWIVEQAGWCPDLLSVNEAKSLSLKNGIFGKESLKWKIIERVGSSCLEESCFGDDWKCKGLLETKREST
EEYLQGVTDPLEETSARFVQPAPIALSEVTHSETKLSEQDAGETITQQVRIPTSDKLNEMYENAFIYYTG
EMKRQQDFAGDRCDELKACSRGFAYDFQLAPYQINKKPYQCEICGKIFEKHAYLVQHNRFHTGEKPCECK
ECGKAFTNCSLLVQHQRVHTDEKPYECKHCGKAFLYFSTFFQHQRTHTNEKPYECHKCQKAFNKSANLTR
HQRIHSGEKPYECNLCGKTFTWASNLNDHQKIHTGEKPYECNYCEKAFLCHSAFMKHYRTHTNEKPYECQ
ECMKAFRQKAHLIQHQRVHTGEKPYECKECGKAFACPSYFNRHQRIHTGERPYECKECGKAFIDCKTLIL
HQRIHTGEKPFQCQQCSKAFRQRSHLTQHQRIHTGEKPYECKECGQAFTRLLQVKKHQRVHTVGEILCI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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