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Report for CCDS212.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
212.2 Public Homo sapiens 1 DDOST 24 110 108 CCDS HistoryNCBI Gene:1650Re-query CCDS DB by CCDS ID:212.2Re-query CCDS DB by GeneID:1650See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 212.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000602624.7 ENSP00000473655.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000602624.7Link to Ensembl Protein Viewer:ENSP00000473655.2Re-query CCDS DB by Nucleotide ID:ENST00000602624Re-query CCDS DB by Protein ID:ENSP00000473655
Original member Current member NCBI NM_005216.5 NP_005207.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005216.5Link to Protein Sequence:NP_005207.3Re-query CCDS DB by Nucleotide ID:NM_005216Re-query CCDS DB by Protein ID:NP_005207Link to BLAST:NP_005207.3

Chromosomal Locations for CCDS 212.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 20652379 20652528 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 20652621 20652727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 20652851 20652971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 20653627 20653774 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 20654223 20654371 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 20654614 20654707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 20655440 20655534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 20655676 20655779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 20656101 20656187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 20660881 20660991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 20661197 20661350 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1320 nt):
ATGGAGCCCAGCACCGCGGCCCGGGCTTGGGCCCTCTTTTGGTTGCTGCTGCCCTTGCTTGGCGCGGTTT
GCGCCAGCGGACCCCGCACCTTAGTGCTGCTGGACAACCTCAACGTGCGGGAGACTCATTCGCTTTTCTT
CCGGAGCCTGAAGGACCGGGGCTTTGAGCTCACATTCAAGACCGCTGATGACCCCAGCCTGTCTCTCATA
AAGTATGGGGAATTCCTCTATGACAATCTCATCATTTTCTCCCCTTCGGTAGAAGATTTTGGAGGCAACA
TCAACGTGGAGACCATCAGTGCCTTTATTGACGGCGGAGGCAGTGTGCTGGTAGCTGCCAGCTCCGACAT
TGGTGACCCTCTTCGAGAGCTGGGCAGTGAGTGCGGGATTGAGTTTGACGAGGAGAAAACGGCTGTCATT
GACCATCACAACTATGACATCTCAGACCTTGGCCAGCATACGCTCATCGTGGCTGACACTGAGAACCTGC
TGAAGGCCCCAACCATCGTTGGGAAATCATCTCTAAATCCCATCCTCTTTCGAGGTGTTGGGATGGTGGC
CGATCCTGATAACCCTTTGGTGCTGGACATCCTGACGGGCTCTTCCACCTCTTACTCCTTCTTCCCGGAC
AAGCCTATCACCCAGTATCCACATGCGGTGGGGAAGAACACCCTCCTCATTGCTGGGCTCCAGGCCAGGA
ACAATGCCCGCGTCATCTTCAGCGGCTCCCTCGACTTCTTCAGCGACTCCTTCTTCAACTCAGCAGTGCA
GAAGGCGGCGCCCGGCTCCCAGAGGTATTCCCAGACAGGCAACTATGAACTAGCTGTGGCCCTCTCCCGC
TGGGTGTTCAAGGAGGAGGGTGTCCTCCGTGTGGGGCCTGTGTCCCATCATCGGGTGGGCGAGACAGCCC
CACCCAATGCCTACACTGTCACTGACCTAGTGGAGTATAGCATCGTGATCCAGCAGCTCTCAAATGGCAA
ATGGGTCCCCTTTGATGGCGATGACATTCAGCTGGAGTTTGTCCGCATTGATCCTTTTGTGAGGACCTTC
CTGAAGAAGAAAGGTGGCAAATACAGTGTTCAGTTCAAGTTGCCCGACGTGTATGGTGTATTCCAGTTTA
AAGTGGATTACAACCGGCTAGGCTACACACACCTGTACTCTTCCACTCAGGTATCCGTGCGGCCACTCCA
GCACACGCAGTATGAGCGCTTCATCCCCTCGGCCTACCCCTACTACGCCAGCGCCTTCTCCATGATGCTG
GGGCTCTTCATCTTCAGCATCGTCTTCTTGCACATGAAGGAGAAGGAGAAGTCCGACTGA

Translation (439 aa):
MEPSTAARAWALFWLLLPLLGAVCASGPRTLVLLDNLNVRETHSLFFRSLKDRGFELTFKTADDPSLSLI
KYGEFLYDNLIIFSPSVEDFGGNINVETISAFIDGGGSVLVAASSDIGDPLRELGSECGIEFDEEKTAVI
DHHNYDISDLGQHTLIVADTENLLKAPTIVGKSSLNPILFRGVGMVADPDNPLVLDILTGSSTSYSFFPD
KPITQYPHAVGKNTLLIAGLQARNNARVIFSGSLDFFSDSFFNSAVQKAAPGSQRYSQTGNYELAVALSR
WVFKEEGVLRVGPVSHHRVGETAPPNAYTVTDLVEYSIVIQQLSNGKWVPFDGDDIQLEFVRIDPFVRTF
LKKKGGKYSVQFKLPDVYGVFQFKVDYNRLGYTHLYSSTQVSVRPLQHTQYERFIPSAYPYYASAFSMML
GLFIFSIVFLHMKEKEKSD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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