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Report for CCDS2125.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2125.1 Public Homo sapiens 2 STEAP3 24 110 108 CCDS HistoryNCBI Gene:55240Re-query CCDS DB by CCDS ID:2125.1Re-query CCDS DB by GeneID:55240See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2125.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000393106.6 ENSP00000376818.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000393106.6Link to Ensembl Protein Viewer:ENSP00000376818.2Re-query CCDS DB by Nucleotide ID:ENST00000393106Re-query CCDS DB by Protein ID:ENSP00000376818
Original member Current member EBI ENST00000393107.2 ENSP00000376819.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000393107.2Link to Ensembl Protein Viewer:ENSP00000376819.2Re-query CCDS DB by Nucleotide ID:ENST00000393107Re-query CCDS DB by Protein ID:ENSP00000376819
Original member Current member NCBI NM_001008410.2 NP_001008410.1 Accepted alive Link to Nucleotide Sequence:NM_001008410.2Link to Protein Sequence:NP_001008410.1Re-query CCDS DB by Nucleotide ID:NM_001008410Re-query CCDS DB by Protein ID:NP_001008410Link to BLAST:NP_001008410.1
Original member Current member NCBI NM_018234.3 NP_060704.2 Accepted alive Link to Nucleotide Sequence:NM_018234.3Link to Protein Sequence:NP_060704.2Re-query CCDS DB by Nucleotide ID:NM_018234Re-query CCDS DB by Protein ID:NP_060704Link to BLAST:NP_060704.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001008410.1 488 Q658P3-1 488 100% 0 0
NP_060704.2 488 Q658P3-1 488 100% 0 0

Chromosomal Locations for CCDS 2125.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 119245497 119245988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 119247679 119248206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 119254684 119254848 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 119263057 119263338 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1467 nt):
ATGCCAGAAGAGATGGACAAGCCACTGATCAGCCTCCACCTGGTGGACAGCGATAGTAGCCTTGCCAAGG
TCCCCGATGAGGCCCCCAAAGTGGGCATCCTGGGTAGCGGGGACTTTGCCCGCTCCCTGGCCACACGCCT
GGTGGGCTCTGGCTTCAAAGTGGTGGTGGGGAGCCGCAACCCCAAACGCACAGCCAGGCTGTTTCCCTCA
GCGGCCCAAGTGACTTTCCAAGAGGAGGCAGTGAGCTCCCCGGAGGTCATCTTTGTGGCTGTGTTCCGGG
AGCACTACTCTTCACTGTGCAGTCTCAGTGACCAGCTGGCGGGCAAGATCCTGGTGGATGTGAGCAACCC
TACAGAGCAAGAGCACCTTCAGCATCGTGAGTCCAATGCTGAGTACCTGGCCTCCCTCTTCCCCACTTGC
ACAGTGGTCAAGGCCTTCAATGTCATCTCTGCCTGGACCCTGCAGGCTGGCCCAAGGGATGGTAACAGGC
AGGTGCCCATCTGCGGTGACCAGCCAGAAGCCAAGCGTGCTGTCTCGGAGATGGCGCTCGCCATGGGCTT
CATGCCCGTGGACATGGGATCCCTGGCGTCAGCCTGGGAGGTGGAGGCCATGCCCCTGCGCCTCCTCCCG
GCCTGGAAGGTGCCCACCCTGCTGGCCCTGGGGCTCTTCGTCTGCTTCTATGCCTACAACTTCGTCCGGG
ACGTTCTGCAGCCCTATGTGCAGGAAAGCCAGAACAAGTTCTTCAAGCTGCCCGTGTCCGTGGTCAACAC
CACACTGCCGTGCGTGGCCTACGTGCTGCTGTCACTCGTGTACTTGCCCGGCGTGCTGGCGGCTGCCCTG
CAGCTGCGGCGCGGCACCAAGTACCAGCGCTTCCCCGACTGGCTGGACCACTGGCTACAGCACCGCAAGC
AGATCGGGCTGCTCAGCTTCTTCTGCGCCGCCCTGCACGCCCTCTACAGCTTCTGCTTGCCGCTGCGCCG
CGCCCACCGCTACGACCTGGTCAACCTGGCAGTCAAGCAGGTCTTGGCCAACAAGAGCCACCTCTGGGTG
GAGGAGGAGGTCTGGCGGATGGAGATCTACCTCTCCCTGGGAGTGCTGGCCCTCGGCACGTTGTCCCTGC
TGGCCGTGACCTCACTGCCGTCCATTGCAAACTCGCTCAACTGGAGGGAGTTCAGCTTCGTTCAGTCCTC
ACTGGGCTTTGTGGCCCTCGTGCTGAGCACACTGCACACGCTCACCTACGGCTGGACCCGCGCCTTCGAG
GAGAGCCGCTACAAGTTCTACCTGCCTCCCACCTTCACGCTCACGCTGCTGGTGCCCTGCGTCGTCATCC
TGGCCAAAGCCCTGTTTCTCCTGCCCTGCATCAGCCGCAGACTCGCCAGGATCCGGAGAGGCTGGGAGAG
GGAGAGCACCATCAAGTTCACGCTGCCCACAGACCACGCCCTGGCCGAGAAGACGAGCCACGTATGA

Translation (488 aa):
MPEEMDKPLISLHLVDSDSSLAKVPDEAPKVGILGSGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPS
AAQVTFQEEAVSSPEVIFVAVFREHYSSLCSLSDQLAGKILVDVSNPTEQEHLQHRESNAEYLASLFPTC
TVVKAFNVISAWTLQAGPRDGNRQVPICGDQPEAKRAVSEMALAMGFMPVDMGSLASAWEVEAMPLRLLP
AWKVPTLLALGLFVCFYAYNFVRDVLQPYVQESQNKFFKLPVSVVNTTLPCVAYVLLSLVYLPGVLAAAL
QLRRGTKYQRFPDWLDHWLQHRKQIGLLSFFCAALHALYSFCLPLRRAHRYDLVNLAVKQVLANKSHLWV
EEEVWRMEIYLSLGVLALGTLSLLAVTSLPSIANSLNWREFSFVQSSLGFVALVLSTLHTLTYGWTRAFE
ESRYKFYLPPTFTLTLLVPCVVILAKALFLLPCISRRLARIRRGWERESTIKFTLPTDHALAEKTSHV


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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