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Report for CCDS21275.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
21275.1 |
Public |
Mus musculus |
7 |
Abcc8 |
23 |
108 |
98 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:20927](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:21275.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:20927](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 7 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 21275.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000033123.7 |
ENSMUSP00000033123.6 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000033123.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000033123.6](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000033123](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000033123](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
|
NCBI |
NM_011510.3 |
NP_035640.2 |
Updated |
not alive |
![Link to Nucleotide Sequence:NM_011510.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_035640.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_011510](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_035640](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
|
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_011510.4 |
NP_035640.2 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_011510.4](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_035640.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_011510](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_035640](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_035640.2](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 21275.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (4767 nt): ATGCCCTTGGCCTTCTGCGGCACCGAGAACCACTCGGCCGCCTACCGGGTGGACCAAGGTGTCCTCAACA ACGGCTGCTTCGTGGACGCGCTCAACGTAGTGCCACATGTCTTCCTGCTCTTCATCACATTCCCCATCCT CTTCATCGGATGGGGCAGCCAGAGCTCCAAGGTACACATTCACCATAGCACCTGGCTCCATTTCCCTGGC CACAACCTGCGCTGGATCCTTACCTTCATGCTGCTCTTTGTCCTGGTGTGTGAGATCGCTGAGGGTATCC TGTCTGATGGGGTGACAGAATCCCGCCACCTCCATTTGTACATGCCAGCTGGGATGGCTTTCATGGCTGC CATCACCTCTGTGGTCTACTATCACAACATTGAGACCTCTAACTTCCCCAAGCTGCTGATCGCTCTGCTT ATCTACTGGACCTTGGCCTTCATCACTAAGACCATCAAGTTCGTCAAGTTCTACGACCACGCCATCGGCT TCTCTCAGCTGCGCTTCTGCCTCACGGGGCTTCTGGTGATCCTCTACGGGATGCTGCTGCTGGTGGAGAT CAATGTCATCCGGGTGCGGAGGTACATCTTCTTCAAGACGCCAAGGGAAGTGAAGCCCCCTGAGGACCTG CAGGACCTGGGGGTGCGCTTTCTGCAGCCCTTCGTGAATCTGCTGTCAAAGGGGACCTACTGGTGGATGA ATGCCTTCATCAAGACTGCCCACAGGAAGCCCATCGACCTGCGGGCCATCGGGAAGCTGCCCATCGCCAT GAGAGCCCTCACCAACTATCAGCGACTCTGCGCGGCCTTCGATGCCCAGGCGCGGAAAGACACGCAGAGC CAGCAGGGCGCCCGGGCCATCTGGAGGGCTCTCTGCCATGCCTTTGGGAGACGCCTGGTCCTCAGCAGCA CATTCCGTATCCTGGCTGACCTGCTGGGCTTTGCTGGACCGCTCTGCATCTTTGGGATCGTGGACCACCT CGGGAAGGAGAACCATGTCTTCCAGCCCAAGACACAGTTTCTTGGGGTTTACTTTGTCTCGTCCCAAGAG TTCCTGGGCAACGCCTATGTCTTGGCTGTACTTCTGTTCCTGGCCCTCCTGCTGCAAAGGACGTTCCTGC AAGCCTCGTACTACGTCGCCATTGAAACTGGGATTAACCTGAGAGGGGCGATCCAGACCAAGATTTACAA TAAGATCATGCACTTGTCTACTTCCAACCTGTCAATGGGGGAGATGACGGCTGGGCAGATCTGCAACCTG GTGGCCATCGACACAAATCAGCTCATGTGGTTTTTCTTCTTATGCCCAAACCTCTGGGCTATGCCAGTAC AGATCATTGTGGGCGTGATCCTCCTCTACTACATCCTTGGGGTCAGTGCCTTGATTGGAGCAGCTGTCAT CATTCTGCTGGCTCCTGTACAGTACTTTGTGGCCACCAAGCTCTCCCAGGCACAGCGGAGCACCCTGGAA TATTCCAATGAAAGGCTGAAGCAGACCAACGAGATGCTCCGGGGCATCAAACTGCTCAAACTGTACGCGT GGGAGAACATCTTCTGCTCGAGGGTGGAGATGACGCGCAGGAAGGAAATGACCAGCCTCAGAGCCTTCGC TGTCTACACCTCCATCTCCATCTTCATGAACACAGCTATCCCCATTGCTGCCGTCCTCATTACCTTTGTG GGCCACGTCAGCTTCTTCAAAGAGTCAGACTTCTCACCCTCGGTGGCCTTTGCCTCTCTCTCTCTCTTCC ACATCCTGGTCACACCGCTGTTCCTGCTGTCTAGTGTGGTTCGGTCCACCGTCAAGGCCCTAGTGAGTGT GCAAAAGCTGAGTGAGTTCCTGTCCAGTGCAGAGATCCGTGAGGAACAGTGTGCCCCCCGAGAGCCTGCA CCCCAAGGCCAAGCGGGCAAGTACCAGGCGGTGCCCCTCAAGGTTGTGAACCGCAAGCGCCCAGCCCGGG AAGAGGTTCGGGACCTCTTGGGCCCACTGCAGAGGCTGACCCCCAGCATGGATGGAGATGCTGACAACTT CTGTGTCCAGATCATCGGAGGCTTCTTCACCTGGACCCCTGATGGAATCCCCACCCTGTCCAACATCACC ATCCGTATCCCCCGAGGCCAGCTGACCATGATTGTGGGGCAGGTGGGCTGCGGCAAGTCCTCGCTCCTTC TGGCCACCCTGGGGGAGATGCAGAGGGTCTCCGGGGCCGTCTTCTGGAACAGCAGCCTTCCAGACAGCGA GGGAGAAGACCCCAGGTATTGCCTCAGGACAAGCAACCCAGAGCGGGAGACAGCAGCCGACTCGGATGCC AGGAGCAGAGGCCCCGTAGCCTACGCATCTCAGAAACCATGGCTGCTAAATGCCACGGTGGAGGAGAACA TCACCTTCGAGAGTCCCTTCAATAAGCAAAGGTACAAGATGGTCATCGAAGCCTGCTCCCTGCAGCCAGA CATAGACATCTTACCCCATGGAGACCAGACTCAGATTGGGGAACGGGGCATCAACTTGTCTGGTGGTCAG CGTCAGCGAATCAGTGTAGCCCGAGCCCTCTACCAGCACACCAATGTTGTCTTCTTGGATGACCCTTTCT CAGCTCTGGATGTCCATCTGAGCGACCACCTGATGCAGGCTGGCATCCTTGAGCTGCTCCGGGATGACAA GAGGACAGTGGTCTTGGTGACCCACAAGCTACAGTACCTGCCTCATGCAGACTGGATCATTGCTATGAAG GATGGCACCATTCAGAGGGAGGGGACGCTCAAGGACTTCCAGAGGTCTGAGTGCCAGCTCTTTGAGCATT GGAAGACCCTCATGAACAGGCAAGACCAAGAGCTGGAGAAGGAGACAGTCATGGAGAGGAAAGCCCCAGA ACCGTCTCAGGGCCTGCCCCGTGCCATGTCCTCAAGAGATGGCCTTCTGCTGGATGAGGACGAGGAGGAA GAGGAGGCGGCCGAGAGCGAGGAAGATGACAACTTATCTTCGGTGCTGCATCAGCGAGCCAAGATCCCAT GGCGGGCCTGCACTAAGTATTTGTCCTCTGCCGGCGTCCTGCTCTTGTCCCTGCTTGTCTTCTCCCAGCT ACTCAAGCACATGGTCTTGGTGGCCATTGATTACTGGCTGGCCAAGTGGACGGACAGTGCCCTGGTCCTG AGCCCTGCTGCCAGGAACTGCTCCCTCAGCCAGGAATGCGCCCTGGACCAGTCTGTCTATGCCATGGTAT TCACCGTGCTCTGCAGCCTGGGAATTGCACTGTGCCTTGTCACCTCTGTCACTGTGGAGTGGACAGGACT GAAGGTGGCCAAGAGGCTGCACCGCAGCCTGCTCAATCGCATCATCCTGGCCCCCATGAGGTTCTTTGAG ACCACGCCCCTGGGGAGTATCCTGAACAGATTTTCATCTGACTGTAACACCATTGACCAGCACATCCCAT CCACGCTGGAGTGTCTGAGCCGATCCACTCTACTCTGTGTCTCCGCCTTGACTGTCATCTCCTACGTCAC ACCTGTGTTCCTCGTGGCCCTCTTACCCCTAGCTGTGGTGTGCTACTTCATCCAGAAATACTTCCGAGTG GCGTCCAGGGACCTGCAGCAGCTGGATGACACAACGCAGCTCCCTCTGCTCTCACACTTTGCTGAAACCG TGGAAGGACTCACCACCATCCGTGCCTTCAGGTACGAGGCCCGGTTCCAGCAGAAGCTCCTGGAGTACAC GGACTCCAACAACATCGCCTCCCTCTTCCTCACGGCAGCCAACAGGTGGCTAGAAGTCCGCATGGAGTAC ATTGGAGCATGCGTGGTACTCATCGCAGCCGCCACCTCCATCTCCAACTCCCTGCACAGGGAGCTCTCTG CTGGTCTGGTGGGCCTGGGCCTCACCTACGCCTTGATGGTCTCCAACTACCTCAACTGGATGGTGAGGAA CCTGGCAGACATGGAGATCCAATTGGGGGCTGTGAAGCGCATCCACACACTCCTGAAAACTGAGGCAGAG AGCTATGAGGGGCTCCTAGCACCGTCATTGATCCCCAAGAACTGGCCAGACCAAGGGAAGATTCAAATTC AAAACCTGAGTGTGCGCTATGACAGCTCCCTGAAGCCCGTGCTGAAGCACGTCAATGCCCTCATCGCCCC AGGACAGAAGATCGGGATCTGCGGCCGCACAGGCAGTGGGAAGTCCTCCTTCTCTCTCGCCTTTTTCCGA ATGGTGGACATGTTCGAAGGGCGCATCATCATTGATGGCATCGACATCGCCAAGCTGCCGCTGCACACGC TCCGTTCACGCCTCTCCATCATCCTACAGGACCCTGTCCTCTTCAGCGGCACCATCAGATTCAACCTGGA CCCAGAGAAGAAATGCTCAGACAGCACACTCTGGGAGGCTCTGGAGATCGCCCAGCTGAAGCTGGTGGTG AAGGCACTGCCAGGAGGCCTGGATGCCATCATCACAGAAGGAGGGGAGAATTTTAGTCAAGGTCAGAGGC AGCTGTTCTGCCTGGCTCGGGCCTTCGTGAGAAAGACCAGCATCTTCATCATGGACGAAGCAACTGCCTC CATTGACATGGCTACGGAAAACATCCTCCAGAAGGTGGTGATGACAGCCTTCGCAGACCGCACTGTGGTC ACCATCGCGCACCGCGTACACACCATCCTGAGTGCAGACCTCGTGATGGTCCTGAAGAGGGGAGCCATCC TGGAGTTTGACAAACCGGAGAAGCTTCTGAGCCAGAAGGACAGCGTCTTCGCCTCCTTCGTCCGCGCGGA CAAATGA
Translation (1588 aa): MPLAFCGTENHSAAYRVDQGVLNNGCFVDALNVVPHVFLLFITFPILFIGWGSQSSKVHIHHSTWLHFPG HNLRWILTFMLLFVLVCEIAEGILSDGVTESRHLHLYMPAGMAFMAAITSVVYYHNIETSNFPKLLIALL IYWTLAFITKTIKFVKFYDHAIGFSQLRFCLTGLLVILYGMLLLVEINVIRVRRYIFFKTPREVKPPEDL QDLGVRFLQPFVNLLSKGTYWWMNAFIKTAHRKPIDLRAIGKLPIAMRALTNYQRLCAAFDAQARKDTQS QQGARAIWRALCHAFGRRLVLSSTFRILADLLGFAGPLCIFGIVDHLGKENHVFQPKTQFLGVYFVSSQE FLGNAYVLAVLLFLALLLQRTFLQASYYVAIETGINLRGAIQTKIYNKIMHLSTSNLSMGEMTAGQICNL VAIDTNQLMWFFFLCPNLWAMPVQIIVGVILLYYILGVSALIGAAVIILLAPVQYFVATKLSQAQRSTLE YSNERLKQTNEMLRGIKLLKLYAWENIFCSRVEMTRRKEMTSLRAFAVYTSISIFMNTAIPIAAVLITFV GHVSFFKESDFSPSVAFASLSLFHILVTPLFLLSSVVRSTVKALVSVQKLSEFLSSAEIREEQCAPREPA PQGQAGKYQAVPLKVVNRKRPAREEVRDLLGPLQRLTPSMDGDADNFCVQIIGGFFTWTPDGIPTLSNIT IRIPRGQLTMIVGQVGCGKSSLLLATLGEMQRVSGAVFWNSSLPDSEGEDPRYCLRTSNPERETAADSDA RSRGPVAYASQKPWLLNATVEENITFESPFNKQRYKMVIEACSLQPDIDILPHGDQTQIGERGINLSGGQ RQRISVARALYQHTNVVFLDDPFSALDVHLSDHLMQAGILELLRDDKRTVVLVTHKLQYLPHADWIIAMK DGTIQREGTLKDFQRSECQLFEHWKTLMNRQDQELEKETVMERKAPEPSQGLPRAMSSRDGLLLDEDEEE EEAAESEEDDNLSSVLHQRAKIPWRACTKYLSSAGVLLLSLLVFSQLLKHMVLVAIDYWLAKWTDSALVL SPAARNCSLSQECALDQSVYAMVFTVLCSLGIALCLVTSVTVEWTGLKVAKRLHRSLLNRIILAPMRFFE TTPLGSILNRFSSDCNTIDQHIPSTLECLSRSTLLCVSALTVISYVTPVFLVALLPLAVVCYFIQKYFRV ASRDLQQLDDTTQLPLLSHFAETVEGLTTIRAFRYEARFQQKLLEYTDSNNIASLFLTAANRWLEVRMEY IGACVVLIAAATSISNSLHRELSAGLVGLGLTYALMVSNYLNWMVRNLADMEIQLGAVKRIHTLLKTEAE SYEGLLAPSLIPKNWPDQGKIQIQNLSVRYDSSLKPVLKHVNALIAPGQKIGICGRTGSGKSSFSLAFFR MVDMFEGRIIIDGIDIAKLPLHTLRSRLSIILQDPVLFSGTIRFNLDPEKKCSDSTLWEALEIAQLKLVV KALPGGLDAIITEGGENFSQGQRQLFCLARAFVRKTSIFIMDEATASIDMATENILQKVVMTAFADRTVV TIAHRVHTILSADLVMVLKRGAILEFDKPEKLLSQKDSVFASFVRADK
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