NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS21789.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21789.1 Public Mus musculus 7 Dcun1d3 23 108 98 CCDS HistoryNCBI Gene:233805Re-query CCDS DB by CCDS ID:21789.1Re-query CCDS DB by GeneID:233805See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21789.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000059851.13 ENSMUSP00000058968.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000059851.13Link to Ensembl Protein Viewer:ENSMUSP00000058968.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000059851Re-query CCDS DB by Protein ID:ENSMUSP00000058968
Original member Current member EBI ENSMUST00000098080.8 ENSMUSP00000095686.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000098080.8Link to Ensembl Protein Viewer:ENSMUSP00000095686.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000098080Re-query CCDS DB by Protein ID:ENSMUSP00000095686
Original member Current member EBI ENSMUST00000106519.7 ENSMUSP00000102129.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000106519.7Link to Ensembl Protein Viewer:ENSMUSP00000102129.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000106519Re-query CCDS DB by Protein ID:ENSMUSP00000102129
Original member Current member EBI ENSMUST00000207233.1 ENSMUSP00000147253.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000207233.1Link to Ensembl Protein Viewer:ENSMUSP00000147253.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000207233Re-query CCDS DB by Protein ID:ENSMUSP00000147253
Original member Current member NCBI NM_001163703.1 NP_001157175.1 Accepted alive Link to Nucleotide Sequence:NM_001163703.1Link to Protein Sequence:NP_001157175.1Re-query CCDS DB by Nucleotide ID:NM_001163703Re-query CCDS DB by Protein ID:NP_001157175Link to BLAST:NP_001157175.1
Original member Current member NCBI NM_173408.3 NP_775584.1 Accepted alive Link to Nucleotide Sequence:NM_173408.3Link to Protein Sequence:NP_775584.1Re-query CCDS DB by Nucleotide ID:NM_173408Re-query CCDS DB by Protein ID:NP_775584Link to BLAST:NP_775584.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001157175.1 304 Q8K0V2 304 100% 0 0
NP_775584.1 304 Q8K0V2 304 100% 0 0

Chromosomal Locations for CCDS 21789.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 119857573 119858056 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119859380 119859810 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (915 nt):
ATGGGCCAGTGTGTCACCAAGTGCAAGAATCCTTCATCAACCTTGGGCAGCAAGAATGGAGACCGGGACC
CCAGCAACAAGTCACACAGCAGGCGGGGGGCTAGCCACCGTGAGGAACAGGTGCCACCTTGTGGCAAACC
AGCTGGGGATATTCTTGTCAATGGGACCAAGAAAGCAGAGGCTGCCACTGAGGCCTGCCAGCTGCCAACT
TCTTCTGGAGATGCTGGGAGGGAGTCCAAGACCAATGCTGAGGAGTCTTCTTTGCAGAGGTTGGAAGAAC
TATTCAGGCGCTACAAGGATGAGCGGGAGGATGCAATTTTGGAGGAAGGCATGGAGCGCTTTTGCAATGA
CCTATGTGTTGATCCTACAGAATTTCGAGTGCTGCTCTTGGCCTGGAAGTTCCAGGCTGCTACCATGTGC
AAATTCACCAGGAAGGAGTTTTTTGATGGCTGTAAAGCAATAAGTGCAGACAGCATTGATGGGATCTGTG
CACGGTTCCCTAGCCTCTTAACAGAAGCCAAACAAGAAGATAAATTCAAGGATCTCTACCGGTTTACATT
TCAGTTTGGCCTGGACTCTGAAGAAGGGCAGCGGTCACTGCATCGTGAAATAGCCATTGCCCTATGGAAA
CTAGTATTTACACAGAACAATCCTCCAGTATTGGACCAGTGGCTAAATTTCCTAACAGAGAACCCTTCGG
GAATCAAGGGCATCTCCCGGGACACTTGGAACATGTTTCTTAACTTCACTCAGGTGATTGGCCCCGACCT
CAGCAACTACAGTGAAGATGAGGCCTGGCCGAGTCTCTTTGATACCTTTGTGGAGTGGGAAATGGAGAGA
AGGAAAAGAGAAGTGGAAGGGAGAGGTACACTCAGCTCAGGGCAAGAGGGCTTGTGTCCAGAAGAGCAGA
CTTAG

Translation (304 aa):
MGQCVTKCKNPSSTLGSKNGDRDPSNKSHSRRGASHREEQVPPCGKPAGDILVNGTKKAEAATEACQLPT
SSGDAGRESKTNAEESSLQRLEELFRRYKDEREDAILEEGMERFCNDLCVDPTEFRVLLLAWKFQAATMC
KFTRKEFFDGCKAISADSIDGICARFPSLLTEAKQEDKFKDLYRFTFQFGLDSEEGQRSLHREIAIALWK
LVFTQNNPPVLDQWLNFLTENPSGIKGISRDTWNMFLNFTQVIGPDLSNYSEDEAWPSLFDTFVEWEMER
RKREVEGRGTLSSGQEGLCPEEQT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH