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Report for CCDS21938.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21938.1 Public Mus musculus 7 Adam12 23 108 98 CCDS HistoryNCBI Gene:11489Re-query CCDS DB by CCDS ID:21938.1Re-query CCDS DB by GeneID:11489See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21938.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000067680.10 ENSMUSP00000065213.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000067680.10Link to Ensembl Protein Viewer:ENSMUSP00000065213.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000067680Re-query CCDS DB by Protein ID:ENSMUSP00000065213
Original member NCBI NM_007400.2 NP_031426.2 Updated not alive Link to Nucleotide Sequence:NM_007400.2Link to Protein Sequence:NP_031426.2Re-query CCDS DB by Nucleotide ID:NM_007400Re-query CCDS DB by Protein ID:NP_031426
Current member NCBI NM_007400.3 NP_031426.2 Accepted alive Link to Nucleotide Sequence:NM_007400.3Link to Protein Sequence:NP_031426.2Re-query CCDS DB by Nucleotide ID:NM_007400Re-query CCDS DB by Protein ID:NP_031426Link to BLAST:NP_031426.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031426.2 903 Q61824 903 100% 0 0

Chromosomal Locations for CCDS 21938.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 133887942 133887996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 133890174 133890304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 133907504 133907677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 133909094 133909202 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 133909827 133909962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 133912816 133912924 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 133916412 133916489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 133919504 133919702 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 133919807 133919915 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 133929893 133930088 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 133931732 133931821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 133937422 133937599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 133961084 133961232 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 133964721 133964805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 133967831 133968000 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 133974336 133974407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 133975463 133975528 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 133981404 133981590 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 133998158 133998234 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 134012277 134012355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 134134719 134134792 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 134172783 134172880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 134224787 134224877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2712 nt):
ATGGCAGAGCGCCCGGCGCGGCGCGCGCCCCCCGCCCGCGCCCTCCTGCTGGCCCTGGCTGGGGCCCTGC
TGGCGCCCCGTGCAGCCCGAGGGATGAGTTTGTGGGACCAGAGAGGAACTTACGAAGTGGCCAGAGCCTC
CCTTCTGAGCAAGGACCCTGGGATCCCAGGACAGAGCATCCCAGCCAAGGATCATCCAGACGTGCTGACT
GTGCAACTGCAGCTGGAGAGCCGAGACCTGATCCTCAGCCTGGAAAGGAATGAGGGACTCATTGCCAATG
GCTTCACGGAGACCCATTATCTGCAAGATGGTACTGATGTCTCTCTCACTCGAAATCACACGGATCATTG
TTACTACCATGGACATGTGCAAGGAGATGCTGCATCAGTGGTCAGCCTCAGTACTTGCTCTGGTCTCCGG
GGACTTATCATGTTTGAAAATAAAACGTACAGCTTAGAGCCAATGAAAAACACCACTGACAGCTACAAAC
TCGTCCCAGCTGAGAGCATGACGAACATCCAAGGGCTGTGTGGGTCACAGCATAACAAGTCCAACCTCAC
CATGGAAGATGTCTCCCCTGGAACCTCTCAAATGCGGGCAAGAAGGCATAAGAGAGAGACCCTTAAGATG
ACCAAGTACGTAGAGCTGGTTATTGTGGCAGACAACAGAGAGTTTCAGAGGCAAGGAAAAGACCTGGAGA
AAGTTAAGCAGCGATTAATAGAGATCGCCAATCACGTTGACAAGTTTTACAGACCACTGAACATCCGGAT
CGTGCTGGTAGGAGTGGAAGTGTGGAATGACATCGACAAATGCTCTATAAGCCAGGACCCATTCACCAGC
CTCCATGAGTTTCTAGACTGGAGAAAGATAAAGCTTCTACCTCGAAAATCCCACGACAATGCTCAGCTTA
TCAGTGGGGTTTATTTCCAAGGAACCACCATCGGCATGGCACCCATCATGAGCATGTGCACTGCAGAACA
GTCTGGAGGAGTTGTCATGGACCATTCAGACAGCCCCCTTGGTGCCGCAGTGACCTTGGCACATGAGCTG
GGCCACAACTTCGGGATGAACCATGACACACTGGAGAGGGGCTGCAGCTGCAGAATGGCCGCAGAGAAAG
GAGGCTGCATCATGAACCCGTCCACGGGGTTCCCATTCCCCATGGTGTTCAGCAGCTGCAGCAGGAAGGA
CCTGGAGGCTAGCCTGGAGAAGGGCATGGGGATGTGCCTCTTCAACCTACCAGAGGTCAAGCAGGCCTTT
GGGGGCCGGAAGTGTGGAAATGGCTATGTGGAAGAGGGAGAAGAGTGTGACTGCGGAGAACCGGAGGAAT
GCACGAATCGCTGCTGTAACGCTACCACCTGTACTCTGAAGCCAGATGCTGTGTGCGCGCACGGGCAGTG
CTGTGAAGACTGTCAGCTGAAGCCTCCAGGAACTGCATGCAGGGGCTCCAGCAACTCCTGTGACCTCCCA
GAATTCTGCACAGGGACTGCCCCTCACTGTCCAGCCAATGTGTACCTACATGATGGCCACCCGTGTCAGG
GCGTGGATGGTTACTGCTACAACGGCATCTGCCAGACCCATGAGCAGCAGTGTGTCACGCTCTGGGGACC
AGGTGCTAAACCGGCTCCTGGCATCTGCTTTGAGCGAGTCAACTCTGCAGGAGATCCTTATGGTAACTGT
GGCAAAGACTCCAAGAGCGCCTTCGCCAAATGTGAGCTGAGAGATGCCAAGTGTGGGAAAATCCAGTGTC
AAGGTGGTGCAAGCCGACCTGTCATTGGTACCAATGCTGTTTCCATAGAAACAAATATCCCACAGCAGGA
AGGAGGTCGGATTCTGTGCCGGGGGACCCATGTGTACTTGGGTGATGACATGCCAGACCCAGGGCTTGTG
CTTGCAGGAACAAAGTGTGCAGAAGGAAAAATCTGCCTCAATCGTCGATGTCAGAATATCAGTGTCTTCG
GCGTTCACAAGTGTGCCATGCAGTGCCACGGCCGAGGGGTATGTAACAACAGGAAGAATTGCCACTGTGA
AGCCCACTGGGCTCCACCCTTCTGTGACAAGTTTGGCTTTGGAGGAAGCACAGACAGTGGTCCCATCAGG
CAAGCAGATAACCAGGGCTTGACTGTAGGAATCCTGGTGAGCATCCTGTGTCTGCTTGCTGCTGGATTTG
TGGTGTATCTCAAAAGGAAGACGTTGATGCGGCTGCTGTTCACACATAAAAAAACCACCATGGAAAAGCT
AAGGTGTGTGCACCCTTCCCGGACACCCAGTGGCCCTCACCTTGGCCAGGCTCACCACACCCCCGGGAAA
GGCCTGCTGATGAACCGGGCACCACATTTCAATACCCCCAAGGACAGGCACTCGCTGAAATGCCAGAACA
TGGACATCAGCAGGCCCCTCGACGCTCGAGCCGTCCCACAGCTTCAGTCACCTCAGCGAGTGCTCCTGCC
TCTCCACCAGACCCCACGTGCACCCAGTGGCCCTGCCAGGCCCCTGCCCGCCAGTCCTGCAGTCAGGCAG
GCCCAGGGCATTCGAAAACCCAGTCCTCCTCAGAAGCCTCTGCCTGCTGATCCACTGAGCAGGACTTCTC
GGCTCACTAGTGCCTTGGTGAGGACCCCAGGGCAGCAGGAACCTGGGCACCGCCCAGCCCCCATCAGACC
TGCCCCTAAGCATCAAGTACCCAGACCTTCCCACAATGCCTATATCAAGTGA

Translation (903 aa):
MAERPARRAPPARALLLALAGALLAPRAARGMSLWDQRGTYEVARASLLSKDPGIPGQSIPAKDHPDVLT
VQLQLESRDLILSLERNEGLIANGFTETHYLQDGTDVSLTRNHTDHCYYHGHVQGDAASVVSLSTCSGLR
GLIMFENKTYSLEPMKNTTDSYKLVPAESMTNIQGLCGSQHNKSNLTMEDVSPGTSQMRARRHKRETLKM
TKYVELVIVADNREFQRQGKDLEKVKQRLIEIANHVDKFYRPLNIRIVLVGVEVWNDIDKCSISQDPFTS
LHEFLDWRKIKLLPRKSHDNAQLISGVYFQGTTIGMAPIMSMCTAEQSGGVVMDHSDSPLGAAVTLAHEL
GHNFGMNHDTLERGCSCRMAAEKGGCIMNPSTGFPFPMVFSSCSRKDLEASLEKGMGMCLFNLPEVKQAF
GGRKCGNGYVEEGEECDCGEPEECTNRCCNATTCTLKPDAVCAHGQCCEDCQLKPPGTACRGSSNSCDLP
EFCTGTAPHCPANVYLHDGHPCQGVDGYCYNGICQTHEQQCVTLWGPGAKPAPGICFERVNSAGDPYGNC
GKDSKSAFAKCELRDAKCGKIQCQGGASRPVIGTNAVSIETNIPQQEGGRILCRGTHVYLGDDMPDPGLV
LAGTKCAEGKICLNRRCQNISVFGVHKCAMQCHGRGVCNNRKNCHCEAHWAPPFCDKFGFGGSTDSGPIR
QADNQGLTVGILVSILCLLAAGFVVYLKRKTLMRLLFTHKKTTMEKLRCVHPSRTPSGPHLGQAHHTPGK
GLLMNRAPHFNTPKDRHSLKCQNMDISRPLDARAVPQLQSPQRVLLPLHQTPRAPSGPARPLPASPAVRQ
AQGIRKPSPPQKPLPADPLSRTSRLTSALVRTPGQQEPGHRPAPIRPAPKHQVPRPSHNAYIK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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