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Report for CCDS22014.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22014.1 Public Mus musculus 7 Pidd1 23 108 98 CCDS HistoryNCBI Gene:57913Re-query CCDS DB by CCDS ID:22014.1Re-query CCDS DB by GeneID:57913See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22014.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000026580.11 ENSMUSP00000026580.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000026580.11Link to Ensembl Protein Viewer:ENSMUSP00000026580.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000026580Re-query CCDS DB by Protein ID:ENSMUSP00000026580
Original member Current member EBI ENSMUST00000106005.8 ENSMUSP00000101627.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000106005.8Link to Ensembl Protein Viewer:ENSMUSP00000101627.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000106005Re-query CCDS DB by Protein ID:ENSMUSP00000101627
Original member Current member NCBI NM_022654.2 NP_073145.1 Accepted alive Link to Nucleotide Sequence:NM_022654.2Link to Protein Sequence:NP_073145.1Re-query CCDS DB by Nucleotide ID:NM_022654Re-query CCDS DB by Protein ID:NP_073145Link to BLAST:NP_073145.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_073145.1 915 Q9ERV7 915 100% 0 0

Chromosomal Locations for CCDS 22014.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 141438589 141438847 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 141439078 141439277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 141439378 141439491 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 141439571 141439689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 141439792 141439915 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 141440003 141440153 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 141440231 141440366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 141440458 141440605 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 141440686 141440865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 141440976 141441101 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 141441173 141441374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 141441475 141441529 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 141441612 141441821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 141442151 141442564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 141442968 141443277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2748 nt):
ATGGCTGCAGTGTTGGAGGGGCAGGAGCCGGAGGAAACTGCAGCTGCTGCAGAGGATGCTGCAACATCCA
CCTTGGAGGCTGTGGATGCCGGGCCTGGAGCACCTTTTCTCCCGGCTGGGAACCAGTTGAACTTGGACCT
ACGCCCAGGGGGCTGCCATCGGCTACAGTACCTGTGTTCCCAGCAGCCCCCACAGCTGCTGCAAGTGGAG
TTTTTGCGGCTCAGCACCCATGAGGACCCTCAGCTGCTGGATGACACCCTAGCCAAGGTTCCGTGGAGTC
TGCTGCGCCTTCGCTCCCTGGTCCTCAAAGGTGGCCAGAGCCGGGGTGCCCTGGGTGCCTGCCTCCATGG
AACCCTGACCACTCTGCCTGCTGGCCTGAGTGATTTGGCCTGCCTGGCTCACCTAGACCTGAGCTTCAAC
AGGCTGGAGACGCTGCCTACCTGTGTCCCGGAACTGCACGGCCTGGATGCGTTGCTGCTTTCTCACAACC
ATCTCTCAGAGCTGCCCGAGGCCCTGGGGGCACTGCCCGCCCTTACCTTCCTCACCGTGACACACAACCG
CCTAGAAAGACTACCCCTAACACTCGGGTCCCTGTCCACCCTTCAGCGTCTCGATCTCTCTGAGAACCTT
CTAGACACCATACCCTCTGAGATTGGAAACCTGCGCAGCCTCAGTGAGCTCAATCTGGCCTCCAACCGGC
TGCAGAGTCTCCCAGCTTCCCTCGCGGGGCTGCGGTCCCTGCGGCTCCTTGTTCTGCACAGCAACCTCCT
GACCTCAGTGCCCACTGGCCTGGTCCACCTGCCACTGATCACTCGGCTTGACCTGAGGGACAACCGGCTC
CGAGACCTGCCTGCTGAGTTACTAGACGCTCCCTTTGTGCGCCTGCAGGGGAACCCTCTGGGCGAGGCCT
CTCCAGCACCCCCAAGTCCCCCAGACATATCCCAGGTTCCAGAAATGCCCAGGCTATTGCTGACCTCAGA
TTTGGACAGCTTCCTTGTGACTCCCCATGGCTGTTCTGTGACCCTGGCCTGTGGTGTCCGCCTACAGTTT
CCAGCAGGAGCCACCACCACGCCTGTCACCATCCACTATCGACTCTGGTTGCCCGAGCCAGGCCTGGTCT
CTCTGGGACCTCATGACTTCCTGCTTAGTAGTGTCCTGGAGCTGCAGCCCCATGGGGTGGCTTTCCAGCA
AGATGTGAGCTTATGGCTGCTCTTTGTCCCTCCACGAGTCCGTCGCTGTCGTGAGGTAGTTGTGAGGACA
CGGAGTAACAACACCTGGAATGACCTAGAGACCCAACTGGAGGAAGAGGCACCCAAGAGGCTCTGGGCTC
GCTGCCAGGTGCCCCACTTCTCCTGGTTCCTGGTCGTTTTACGCCCAGTATCCAACACTTGCCTTTTGCC
ACCAGAGGGAGCACTTCTCTGCTCCTCAGGTCATCCTGGGGTCAGAGTCACTTTTCCCCCTGGGGTTACA
GAAGAGCCTCGGCAAGTCTCCATGCAGGTAGTGCATATGGCTGGACTAGAGCTGAGAACCCTTCTGGAAG
AATCAGAGGCATCAGTAAGCCCTCTGCTGTGCCTTTCACAGAGCGGCCCCCCCAGCTTCCTACAACCTGT
CACTGTGCAGTTGCCCCTGCCTCCTGGCGTTACAGGCTTCAGTCTAGACCGCTCCCACCTGCATCTGCTC
TACCGAACACCCCTGACAACCACCTGGGATGATATCACCACTCAGGTGGCACTGGAATTCACCCACCTGT
ATGCACGCTTCCAGGTCACGCACTTCTCCTGGTACTGGCTCTGGTATACCACCAAAACCTGTGTGGGGGG
CCTGGCCCGGAAGGCCTGGGAACGGCTGCGACTGCACCGTGTGAATCTCATTGCACTGCAGAGGCGCCGA
GACCCTGAGCAGGTTCTGCTGCAGTGCCTGCCACGGAACAAGGTAGATGCCACCCTGAGTCGGCTGCTGG
TTCGCTACCGTGGCCCTGAACCCTCTGAGACTGTGGAGATGTTTGAGGGTGAGAAGTTCTTTGCAGCCTT
TGAGCGGGGCATTGATGTAGATGCAGACCGTCCAGACTGTGTGGATGGCAGAATCTGCTTTGTCTTCTAT
TCACACCTGAAGAACGTAAAGGAGGTATACATCACCACAGCCTTGGACCGGGAAGCTCAGGATGTTCGAG
GACAGGTGTCCTTTTATCGGGGTTCACTTCCTGTGGAGGTACCTGCAGAGGCAGAGGCTGCCCGGCAGAG
GAAGGGTACAGATGCACTGTGGATGGCCACCTTGCCCATCAAGCTACCGAGACTCCGGGGTGCCCAGGGG
AGTGGGCAGGGGACTGACTTCTCCTTGATGCCTCTGAACCTGGGTGATGCAGAAACTGGATTCCTGACTC
AGAGCAACCTGCTGAGTGTGGCCTCACGCCTAGGTCCTGACTGGCCAGCTGTGGCCCTGCACCTAGGCAT
GCCCTACCATAAGCTACAGCGTATCCGGCATGAATTCAGGGATGACCTGGATGGCCAGGTCCGACACATG
CTCTTCTCTTGGGCTGAGCGCCAGACTGGACAGCCTGGAGCTGTGGGACACCTGGTACAGGCCTTGGAAC
AGAGTGATCGGCGGGATGTGGCTGAAGAGGTGCGTGCCATCTTGGAGCTTGGCCGCCACAAGTACCAGGA
CAGCATTCGACGCACAGGGCTGGCCCCTGAGGATTCTACTCTGCCTGGCACCTCGGCTTCACAGACTCCA
GAGTCTGCACAGGCCTAG

Translation (915 aa):
MAAVLEGQEPEETAAAAEDAATSTLEAVDAGPGAPFLPAGNQLNLDLRPGGCHRLQYLCSQQPPQLLQVE
FLRLSTHEDPQLLDDTLAKVPWSLLRLRSLVLKGGQSRGALGACLHGTLTTLPAGLSDLACLAHLDLSFN
RLETLPTCVPELHGLDALLLSHNHLSELPEALGALPALTFLTVTHNRLERLPLTLGSLSTLQRLDLSENL
LDTIPSEIGNLRSLSELNLASNRLQSLPASLAGLRSLRLLVLHSNLLTSVPTGLVHLPLITRLDLRDNRL
RDLPAELLDAPFVRLQGNPLGEASPAPPSPPDISQVPEMPRLLLTSDLDSFLVTPHGCSVTLACGVRLQF
PAGATTTPVTIHYRLWLPEPGLVSLGPHDFLLSSVLELQPHGVAFQQDVSLWLLFVPPRVRRCREVVVRT
RSNNTWNDLETQLEEEAPKRLWARCQVPHFSWFLVVLRPVSNTCLLPPEGALLCSSGHPGVRVTFPPGVT
EEPRQVSMQVVHMAGLELRTLLEESEASVSPLLCLSQSGPPSFLQPVTVQLPLPPGVTGFSLDRSHLHLL
YRTPLTTTWDDITTQVALEFTHLYARFQVTHFSWYWLWYTTKTCVGGLARKAWERLRLHRVNLIALQRRR
DPEQVLLQCLPRNKVDATLSRLLVRYRGPEPSETVEMFEGEKFFAAFERGIDVDADRPDCVDGRICFVFY
SHLKNVKEVYITTALDREAQDVRGQVSFYRGSLPVEVPAEAEAARQRKGTDALWMATLPIKLPRLRGAQG
SGQGTDFSLMPLNLGDAETGFLTQSNLLSVASRLGPDWPAVALHLGMPYHKLQRIRHEFRDDLDGQVRHM
LFSWAERQTGQPGAVGHLVQALEQSDRRDVAEEVRAILELGRHKYQDSIRRTGLAPEDSTLPGTSASQTP
ESAQA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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