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Report for CCDS22271.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22271.1 Public Mus musculus 8 Adam34 23 108 98 CCDS HistoryNCBI Gene:252866Re-query CCDS DB by CCDS ID:22271.1Re-query CCDS DB by GeneID:252866See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22271.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000110411.3 ENSMUSP00000106041.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000110411.3Link to Ensembl Protein Viewer:ENSMUSP00000106041.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000110411Re-query CCDS DB by Protein ID:ENSMUSP00000106041
Original member Current member EBI ENSMUST00000212185.1 ENSMUSP00000148332.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000212185.1Link to Ensembl Protein Viewer:ENSMUSP00000148332.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000212185Re-query CCDS DB by Protein ID:ENSMUSP00000148332
Original member Current member NCBI NM_145745.3 NP_665688.2 Accepted alive Link to Nucleotide Sequence:NM_145745.3Link to Protein Sequence:NP_665688.2Re-query CCDS DB by Nucleotide ID:NM_145745Re-query CCDS DB by Protein ID:NP_665688Link to BLAST:NP_665688.2

Chromosomal Locations for CCDS 22271.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 43650462 43652606 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2145 nt):
ATGAGTGGGGCTAAGGCCCTGGTCCATAAAAGGAACATGTTCCTTAAGTTCTGCCTGTGGACGATGTTCT
TCTTCTCTGCATGGTCATCAATTGGACATGCTAAGTACAGTAGCCTTCCAGAAGTAGTGACACCCTTGAG
GGTCACTGTCACTAGAGGAAATAATATTTCACCAGGTTGGCTGTCCTATAGCCTGAACATTGAAGGGCAG
AGGCACATAATCACTATGAAACCCAAGAAAAACTTGATATCCAGAAACTTCTTATTATTCACTTATAGTG
ACCAAGGTGATCTCCTTGAAGAACAGCCTTTTGTGCAGAACGACTGCTACTACCATGGCTATGTGGATGA
AGACCCAGAGTCCCTGGTCATTGTCAATACCTGTTTTGGAAGTTTGCAAGGCACACTAGAAATAAATGGC
ACAACTTATGAAATCATGCCCAAGAGCACAACGTCAACATTTGAACATCTGGCTTACAAAATGGACAATG
GGGAGTCCGAACCATCTCCCATGAGATGTGGGTTATCAGAGGAGGAAATAGCACAACAAATGAAGCTTCA
AGAAAGCAATGCCTCCACTCTTTTGCAAATTCCCTATGAGAATTGGTGGACGCATCACAGGTTTATTGAT
TATTTTGTAGTAATAGATCATAACCGCTATGTTCATAGAAATAACAATACCACGACTTGTATTCAAGATA
TGTTGCAAGTAGTCAATGGAATAAATGGTTATTATCTTCAAATACAGACTGATGTGGTTTTGACCAAACT
TGAAGTTTGGAGTCAAAATAATCTTATCAATGTAGAACAAGAAATAAGAAAGGTTCTAGGTGCATTCTGT
AATTGGAAGATAAATGCGATTGGCAATCGTGTTAGACATGATATCATACACCTTTTTGTCAGACGTAGTT
ATGGTACATATTTAGGGTTAGCTAATGTAGGTACAGTTTGTTTAACTCTAAACTGTGCAGTTAACAGTTT
TCTTTCTGATTCGTTATCAGATATGGCATTCATCATAGCACATGAGATGGGTCATAACTTGGGCATGATG
CATGATGGAAGTTCATGTACATGTGGGCTAAGTAGCTGCATAATGGCCCCATATAAATCGAATTCTCCAA
AATTCAGTAACTGTAGTTATGAAGAAATGTTTTCAGTTGTTACCAAAAGAAGTTGCTTGTATGATATTCC
AGATGCACTAAAAACAATAAACCTGATGCCAACCATGTGTGGCAATAACTTGGTTGAAGAAGGAGAGGAG
TGTGATTGTGGGAGCACTGAATCCTGTTTACAAGATCCTTGCTGTAGCAGCGACTGTGTTCTCAAACCTG
GTGCTCAATGTGCTTTTGGACTTTGTTGCAAAAATTGCCAGTTCCTTAAAACAGGCACTGTGTGTAGAGA
AGAGAAAAATGAGTGTGACCTTCCAGAGTGGTGCAATGGAACTTCCGCTGAGTGTCCAGGAGATGTGTAT
AAAGCAGACGGAATCCCTTGCAGTGGTGAGGGATATTGCTATAAAATGGAATGTCATCAACGTGATGAGC
AGTGTCGGAAGATTTTTGGCAATGGAAGTAGAAGCGCAGATGAAATTTGCTACATGGAAATGAACAGACG
GGGTGACCGCTTTGGAAACTGTGGCAATGATAGCTCTATGTATAGAAGATGCAACCTTGCTGATGTACTC
TGTGGGCGAATTCAGTGTGAGAATGTGATACAACTTCCCCAAAGGAGAAACCATGAGACAGTGCATTATA
CTCACTTCAGTAATGTCACCTGCTGGACTACGGACTATCATTTTGGGATCACCATAGATGACGTTGGAGC
AGTGAGCGATGGCACAACTTGTGGTCCAGACTATTTATGTGTTCACAGAAAGTGTGTCAGCAAGTCTGTT
CTGGTAAGAAACTGTACACCACAGTTATGCCATATGCAAGGAGTCTGCAACAATAAAGACCACTGCCATT
GTAATAACACATGGGAACCACCGGACTGTCAACTACGTGGCCATGGAGGTAGTATAGACAGTGGACCACC
TCCAGTGCCTTTATCTCCTTCCAATTGGAGTATGTACTTCCTAGCTTTTATAATTATGTATGTGCTTGGC
TTTATTGCTTTGTATGGCATTCGTGAATTAAAGAAAAAATCCTAA

Translation (714 aa):
MSGAKALVHKRNMFLKFCLWTMFFFSAWSSIGHAKYSSLPEVVTPLRVTVTRGNNISPGWLSYSLNIEGQ
RHIITMKPKKNLISRNFLLFTYSDQGDLLEEQPFVQNDCYYHGYVDEDPESLVIVNTCFGSLQGTLEING
TTYEIMPKSTTSTFEHLAYKMDNGESEPSPMRCGLSEEEIAQQMKLQESNASTLLQIPYENWWTHHRFID
YFVVIDHNRYVHRNNNTTTCIQDMLQVVNGINGYYLQIQTDVVLTKLEVWSQNNLINVEQEIRKVLGAFC
NWKINAIGNRVRHDIIHLFVRRSYGTYLGLANVGTVCLTLNCAVNSFLSDSLSDMAFIIAHEMGHNLGMM
HDGSSCTCGLSSCIMAPYKSNSPKFSNCSYEEMFSVVTKRSCLYDIPDALKTINLMPTMCGNNLVEEGEE
CDCGSTESCLQDPCCSSDCVLKPGAQCAFGLCCKNCQFLKTGTVCREEKNECDLPEWCNGTSAECPGDVY
KADGIPCSGEGYCYKMECHQRDEQCRKIFGNGSRSADEICYMEMNRRGDRFGNCGNDSSMYRRCNLADVL
CGRIQCENVIQLPQRRNHETVHYTHFSNVTCWTTDYHFGITIDDVGAVSDGTTCGPDYLCVHRKCVSKSV
LVRNCTPQLCHMQGVCNNKDHCHCNNTWEPPDCQLRGHGGSIDSGPPPVPLSPSNWSMYFLAFIIMYVLG
FIALYGIRELKKKS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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