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Report for CCDS22362.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22362.1 Public Mus musculus 8 Sugp2 23 108 98 CCDS HistoryNCBI Gene:234373Re-query CCDS DB by CCDS ID:22362.1Re-query CCDS DB by GeneID:234373See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22362.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000093458.10 ENSMUSP00000091167.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000093458.10Link to Ensembl Protein Viewer:ENSMUSP00000091167.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000093458Re-query CCDS DB by Protein ID:ENSMUSP00000091167
Original member Current member EBI ENSMUST00000131489.7 ENSMUSP00000114833.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000131489.7Link to Ensembl Protein Viewer:ENSMUSP00000114833.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000131489Re-query CCDS DB by Protein ID:ENSMUSP00000114833
Original member Current member EBI ENSMUST00000164403.7 ENSMUSP00000128029.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000164403.7Link to Ensembl Protein Viewer:ENSMUSP00000128029.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000164403Re-query CCDS DB by Protein ID:ENSMUSP00000128029
Original member NCBI NM_001168290.1 NP_001161762.1 Updated not alive Link to Nucleotide Sequence:NM_001168290.1Link to Protein Sequence:NP_001161762.1Re-query CCDS DB by Nucleotide ID:NM_001168290Re-query CCDS DB by Protein ID:NP_001161762
Current member NCBI NM_001168290.2 NP_001161762.1 Accepted alive Link to Nucleotide Sequence:NM_001168290.2Link to Protein Sequence:NP_001161762.1Re-query CCDS DB by Nucleotide ID:NM_001168290Re-query CCDS DB by Protein ID:NP_001161762Link to BLAST:NP_001161762.1
Original member NCBI NM_172755.3 NP_766343.3 Updated not alive Link to Nucleotide Sequence:NM_172755.3Link to Protein Sequence:NP_766343.3Re-query CCDS DB by Nucleotide ID:NM_172755Re-query CCDS DB by Protein ID:NP_766343
Current member NCBI NM_172755.4 NP_766343.3 Accepted alive Link to Nucleotide Sequence:NM_172755.4Link to Protein Sequence:NP_766343.3Re-query CCDS DB by Nucleotide ID:NM_172755Re-query CCDS DB by Protein ID:NP_766343Link to BLAST:NP_766343.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001161762.1 1067 Q8CH09 1067 100% 0 0
NP_766343.3 1067 Q8CH09 1067 100% 0 0

Chromosomal Locations for CCDS 22362.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 70236683 70236794 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70242491 70244056 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70248426 70248546 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70251614 70252101 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70253579 70253690 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70257130 70257614 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70258943 70259004 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70259683 70259819 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70260469 70260589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3204 nt):
ATGGCAGCAAGGCGGATGGCGCAGGAATCTTTGGACAGTGTATTACAGGAGAAATCTAAACGGTATGGGG
ATTCCGAAGCTGTTGGTGAAGCTCTCCATCTTAAAGCTCAAGATCTCCTAAGGACAGGCTCAAGAGCCAG
AGCAGATGTCTATGAGGACATTCATGGTGATAGCAGGTACTCCGCCAGTGGATCTGGAGTGTATTCACTA
GACATGGGAAGAGAGGGTCTGAGAGGTGACATGTTTGTGGGACCCTCCTTCAGATCTAGCAACCAGTCGG
TTGGTGAAGACAGCTATCTTCGCAAAGAATGTGGCCGGGATCTGGAACCAGCCCATACTGACTCCCGGGA
CCAGAGTTTTGGCCACCGGAATCTGGGACATTTTCCTTCTCAGGACTGGAAACTTGCGCTCCGTGGCTCT
TGGGAACAAGACTTGGGCCACTCAGTTTCTCAAGAATCCTCCTGGTCACAGGAATATGGTTTTGGGCCCT
CATTGTTAGGAGACTTGGCCTCCTCCAGGCGGATGGAGAAGGAAAGTCGGGATTATGACCTGGACCATCC
TGGGGAGGTGGACTCTGTGTCTAGAAGCAGTGGGCAAGTCCTGACCAGAGGCCGATCTCTAAACATAGCT
GACCAGGAAGGCACTCTACTAGGAAAGGGGGACACCCAGGGTCTGCTTGGAGCAAAGGGTGTTGGGAAGC
TTATCACACTGAAAAGCATGACCACGAAGAAAATACCTGTTGCCAGTCGTATTACTTCCAAACCTCAGGG
CACTAACCAAATCCAGAAACCCACTCCAAGTCCTGATGTGACCATTGGGACAAGTCCAGTGCTAGATGAA
ATCCAGTTCGCTGCTCTGAAGATTCCTTTGGGGCTGGACCTTAGGACCCTTGGCTTGCCCAGAAGGAAGA
TGGGTTTTGATGCCATAGACAAGGCAGATGTGTTCTCAAGGTTTGGCATAGAGATCATCAAGTGGGCAGG
ATTCCACACTATCAAGGATGACCTGAAGTTCTCCCAACTCTTCCAGACTCTTTTTGAACTGGAAACTGAG
ACCTGTGCCAAGATGCTGGCCTCCTTCAAATGCTCCTTGAAGCCGGAGCATAGAGATTTCTGCTTTTTTA
CCATCAAGTTTCTAAAGCACTCTGCTCTGAAAACGCCCCGAGTTGATAATGAGTTTTTAAACATGCTTTT
AGACAAAGGTGCTGTGAAGACCAAAAACTGCTTTTTTGAGATCATCAAGCCCTTCGACAAGTCCATCATG
CGGCTCCAGGACCGACTGCTGAAGGGCGTCACACCCTTACTCATGGCCTGTAATGCCTATGAACTGAGTG
TCAAGATGAAGACCCTCACTAGCCCATTGGACCTGGCTATGGCCCTGGAGACCACCAACTCTCTTTGCAG
GAAGTCCCTGGCCCTCTTAGGCCAGACCTTCTCCTTGGCTTCTTCCTTCCGGCAGGAGAAGATCCTAGAG
GCTGTGGGCCTCCAAGACATCGCTCCATCCCCGGCCTACTTCCCAAATTTTGAAGATTCCACTTTGTTCG
GAAGGGAGTACATAGACCACCTGAAGGCCTGGCTCATGGCCAGTGGCTATCCCCTCCAGCTCAAGAGAGC
TGTGCCCCCAGAGTCCCGAGAACAGAAAACCACAGCTCAGACCTGGGCTTCGAGCACTCTGAGCCAAGCA
GTTCCCCAGCGGGCGGATCACAGGGTGGTGGACACCATTGACCAGCTTGTCATGCGTGTCATCCAAGGAA
GGCTATCGCCCAGAGAGAGAACACTTCTCCTACAGGACCCTGCTTACTGGTTTCTGTCTGATGAGAGTAG
CCTGGAGTATAAGTACTACAAGCTGAAGTTGGCAGAGTCACAGCGACTGAACCACAGCTGGCCCATTGTG
GAGCGGAGGCCAACGCCCGCACAGTGTGCGGTGCGTGCCATGCTGTATGCACAAGCTGTGCGAAGCCTCA
AGCGCAGACTCCTCCCATGGCAGCGCAGGCGGCTGATTCGCTCCCAGGGTCCTCGAGGCCTGAAGGCCAA
GAAAGCCACCACTGCCCAGCAGACATCCCTGTCCTCAGGCACTCGGCAGAAACACCATGGCCGCCAGGCT
TCTGGCTCCTTGAGGGTGAAGCCACCACCACGGGATTCAAGTGATGCTGCCCAGGACTGCCTATCAGAGC
CTGCCAAACCCTGTCCTCAGCCCTCCAGCCCTGGAGCCTTGGGCCCGTCTCCTCGGCCAACTGGAGCGGA
TGACTCAGAAGCCCTGCCGGCCTCTTCTCGATGCCCCTCTGCTAATATGGATGCAAAGACCATGGAGACT
GCTGAGAAGCTGGCCAGATTTGTGGCTCAGGTCGGCCCTGAGATTGAGCAGTTCAGCATAGAGAACAGCA
CTGACAACCCTGACCTGTGGTTCCTGCACGACCAGAGCAGCTCAGCTTTCAAGTTCTACCGAGAGAAGGT
GCTGGAACTGTGCCCATCCATCTCCTTCCAGTCCACTGGTGAGGCAGGGGACTCAGTACAGAGCCCCACA
GCTGGCAAGGAGGGTAAGGGTGAGCCACAGGAGGGGCACCCTGAGCAGGAGGCTTCACTGGAGGGCACTG
AGGTGCTGCCTGAGGAGGAAGAGGAAGATGAGGAGGAGAGCGAGGACGAGGGTGGAGAGGAGACCTCCAC
TCTCAGGCCACAGGCAGGAGCTGCCAAGTGTCCAGGCTCTGAGGGCAGTTCCCCTACTGACAGCATCCCT
GGAGAGGGGTCCAGGGAGGACCAGGCCAGCACCCCTGGCCTGTCCCAGGCCTCCTCTGGCAGCTGCTTCC
CCAGGAAGAGAATCAGCAGCAAGTCGCTGAAAGTTGGCATGATCCCTGCCCCAAAGAGGGTGTGTCTCAT
CCAGGAGTCAAAGGTCCACGAACCAGTTCGAATTGCCTACGACAGGCCTAGGGGTCGTCCCATAGCCAAA
AAGAAGAAACCCAAGGACATGGAGTTTTCCCAGCAGAAACTGACAGACAAGAACGTGGGCTTCCAGATGC
TGCAGAAGATGGGCTGGAAGGAAGGCCATGGCCTGGGCTCCCTTGGGAAGGGCATCCGAGAGCCCGTCAG
TGTGGGTGCTCTTTCAGAAGGAGAGGGCCTGGGAGCTGATGGGCCTGAGCAGAAAGAAGACACCTTTGAC
GTCTTCCGCCAGCGCATGATGCAAATGTACAGACACAAGCGGGCCAGCAAATAG

Translation (1067 aa):
MAARRMAQESLDSVLQEKSKRYGDSEAVGEALHLKAQDLLRTGSRARADVYEDIHGDSRYSASGSGVYSL
DMGREGLRGDMFVGPSFRSSNQSVGEDSYLRKECGRDLEPAHTDSRDQSFGHRNLGHFPSQDWKLALRGS
WEQDLGHSVSQESSWSQEYGFGPSLLGDLASSRRMEKESRDYDLDHPGEVDSVSRSSGQVLTRGRSLNIA
DQEGTLLGKGDTQGLLGAKGVGKLITLKSMTTKKIPVASRITSKPQGTNQIQKPTPSPDVTIGTSPVLDE
IQFAALKIPLGLDLRTLGLPRRKMGFDAIDKADVFSRFGIEIIKWAGFHTIKDDLKFSQLFQTLFELETE
TCAKMLASFKCSLKPEHRDFCFFTIKFLKHSALKTPRVDNEFLNMLLDKGAVKTKNCFFEIIKPFDKSIM
RLQDRLLKGVTPLLMACNAYELSVKMKTLTSPLDLAMALETTNSLCRKSLALLGQTFSLASSFRQEKILE
AVGLQDIAPSPAYFPNFEDSTLFGREYIDHLKAWLMASGYPLQLKRAVPPESREQKTTAQTWASSTLSQA
VPQRADHRVVDTIDQLVMRVIQGRLSPRERTLLLQDPAYWFLSDESSLEYKYYKLKLAESQRLNHSWPIV
ERRPTPAQCAVRAMLYAQAVRSLKRRLLPWQRRRLIRSQGPRGLKAKKATTAQQTSLSSGTRQKHHGRQA
SGSLRVKPPPRDSSDAAQDCLSEPAKPCPQPSSPGALGPSPRPTGADDSEALPASSRCPSANMDAKTMET
AEKLARFVAQVGPEIEQFSIENSTDNPDLWFLHDQSSSAFKFYREKVLELCPSISFQSTGEAGDSVQSPT
AGKEGKGEPQEGHPEQEASLEGTEVLPEEEEEDEEESEDEGGEETSTLRPQAGAAKCPGSEGSSPTDSIP
GEGSREDQASTPGLSQASSGSCFPRKRISSKSLKVGMIPAPKRVCLIQESKVHEPVRIAYDRPRGRPIAK
KKKPKDMEFSQQKLTDKNVGFQMLQKMGWKEGHGLGSLGKGIREPVSVGALSEGEGLGADGPEQKEDTFD
VFRQRMMQMYRHKRASK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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