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Report for CCDS22380.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22380.1 Public Mus musculus 8 Mpv17l2 23 108 98 CCDS HistoryNCBI Gene:234384Re-query CCDS DB by CCDS ID:22380.1Re-query CCDS DB by GeneID:234384See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 22380.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000038626.9 ENSMUSP00000037929.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000038626.9Link to Ensembl Protein Viewer:ENSMUSP00000037929.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000038626Re-query CCDS DB by Protein ID:ENSMUSP00000037929
Original member Current member NCBI NM_183170.2 NP_898993.1 Accepted alive Link to Nucleotide Sequence:NM_183170.2Link to Protein Sequence:NP_898993.1Re-query CCDS DB by Nucleotide ID:NM_183170Re-query CCDS DB by Protein ID:NP_898993Link to BLAST:NP_898993.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_898993.1 200 Q8VIK2 200 100% 0 0

Chromosomal Locations for CCDS 22380.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 70758986 70759024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70759109 70759237 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70759391 70759467 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70760368 70760538 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70760720 70760906 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (603 nt):
ATGGCTCTGGGAGGCTGGCGCTGGGCTCGCAAGGCGTTGGCTGCGGGGCGCCCGCTGTTCCAGGGCCGCG
CGCTGCTCCTCACCAACACACTGGGCTGCGGCGTGCTCATGGCCGCGGGCGATGGCGCGCGACAGGTCTG
GGAAGTGCGCGCGCGGCCTGGACAGAGATTCAGCGCGCGGCGCTCAGCCAGCATGTTCGCCGTGGGCTGC
AGCATGGGCCCCTTCCTACACTTCTGGTATCTGTGGTTGGACCGCCTCCTCCCCGCGTCGGGCCTACGAA
GCCTCCCGAGTGTGATGAAGAAGGTGCTAGTGGATCAAACGGTGGCATCTCCCATTCTGGGCGTCTGGTA
CTTCCTGGGCCTTGGCAGCCTGGAGGGTCAGACACTAGAGGAGAGCTGCCAGGAGCTGCGGGCCAAATTC
TGGGACTTCTACAAGGCCGACTGGTGTGTGTGGCCAGCTGCCCAGCTAGTGAACTTCCTCTTCATCCCTT
CTCATTTCCGAGTCACCTATATCAATGGGCTGACACTGGGCTGGGACACATACCTGTCCTATCTGAAGTA
CTGGGTCCCTGAACCCCTTCAGACTCCGGGCTGTGCAGACTGA

Translation (200 aa):
MALGGWRWARKALAAGRPLFQGRALLLTNTLGCGVLMAAGDGARQVWEVRARPGQRFSARRSASMFAVGC
SMGPFLHFWYLWLDRLLPASGLRSLPSVMKKVLVDQTVASPILGVWYFLGLGSLEGQTLEESCQELRAKF
WDFYKADWCVWPAAQLVNFLFIPSHFRVTYINGLTLGWDTYLSYLKYWVPEPLQTPGCAD


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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