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Report for CCDS22501.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22501.1 Public Mus musculus 8 Phkb 23 108 98 CCDS HistoryNCBI Gene:102093Re-query CCDS DB by CCDS ID:22501.1Re-query CCDS DB by GeneID:102093See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22501.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000053771.13 ENSMUSP00000050788.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000053771.13Link to Ensembl Protein Viewer:ENSMUSP00000050788.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000053771Re-query CCDS DB by Protein ID:ENSMUSP00000050788
Original member NCBI NM_199446.2 NP_955517.1 Updated not alive Link to Nucleotide Sequence:NM_199446.2Link to Protein Sequence:NP_955517.1Re-query CCDS DB by Nucleotide ID:NM_199446Re-query CCDS DB by Protein ID:NP_955517
Current member NCBI NM_199446.3 NP_955517.1 Accepted alive Link to Nucleotide Sequence:NM_199446.3Link to Protein Sequence:NP_955517.1Re-query CCDS DB by Nucleotide ID:NM_199446Re-query CCDS DB by Protein ID:NP_955517Link to BLAST:NP_955517.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_955517.1 1085 Q7TSH2 1085 100% 0 0

Chromosomal Locations for CCDS 22501.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 85843061 85843112 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 85875634 85875723 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 85878110 85878248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 85879711 85879810 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 85896430 85896537 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 85901877 85901957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 85922127 85922242 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 85935408 85935471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 85940841 85940936 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 85942192 85942389 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 85946052 85946109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 85947135 85947212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 85957496 85957654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 85970903 85970997 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 86011017 86011072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 86011570 86011663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 86016859 86016942 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 86017392 86017496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 86018469 86018551 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 86019036 86019126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 86021385 86021446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 86021543 86021705 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 86022738 86022819 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 86024281 86024338 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 86026457 86026547 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 86029482 86029684 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 86043710 86043844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 86049690 86049819 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 86056448 86056555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 86058545 86058685 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 86059305 86059442 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3258 nt):
ATGGCCAACTCACCTGATGCAGCCTTCTCTTCACCTGCTTTGTTAAGGTCTGGCTCAGTTTATGAACCTC
TTAAAAGCATTAATCTTCCAAGACCTGATAATGAAACTCTATGGGATAAGTTGGATCATTATTACAGAAT
TGTCAAGTCAACGATGCTGATGTATCAAAGTCCAACTACCGGTCTCTTTCCTACTAAAACATGTGGTGGA
GAAGAGAAGTCCAAAGTGCACGAGAGTCTGTACTGTGCTGCGGGTGCCTGGGCCTTGGCGCTAGCATACA
GGCGCATTGATGATGACAAGGGACGGACCCATGAGCTGGAGCACTCGGCCATAAAGTGTATGAGAGGAAT
TCTCTACTGCTACATGCGGCAGGCTGATAAGGTCCAACAGTTTAAACAAGATCCCCGGCCCACAACATGT
CTTCACTCTGTTTTCAGTGTGCACACTGGGGATGAGTTGCTCAGCTATGAAGAATATGGCCATCTTCAGA
TAAATGCAGTCTCACTCTTTCTCCTTTACCTGGTAGAAATGATTTCCTCAGGCCTCCAGATAATCTATAA
CACGGATGAGGTTTCTTTTATTCAAAACCTTGTATTTTGTGTAGAGAGAGTTTACCGTGTTCCTGACTTT
GGTGTCTGGGAAAGAGGAAGCAAATATAACAATGGTAGTACCGAACTGCACTCAAGCTCTGTTGGTTTAG
CAAAAGCAGCCTTAGAAGCAATTAATGGATTTAACCTCTTTGGAAACCAGGGGTGTTCCTGGTCAGTTAT
ATTTGTGGATCTCGATGCTCACAACCGCAACAGGCAGACATTGTGCTCACTGTTACCCAGAGAATCACGC
TCTCATAACACAGATGCTGCCCTGCTCCCGTGCATCAGTTACCCTGCGTTTGCCTTGGATGATGAAGCAC
TGTTCAGCCAGACACTTGATAAAGTGATAAGAAAATTGAAAGGAAAATATGGATTTAAGCGTTTCTTGCG
AGATGGGTACAGAACGCCATTGGAAGATCCCAACAGACGCTATTACAAACCAGCAGAGATTAAGCTGTTT
GATGGCATTGAATGTGAATTTCCCATATTCTTCCTTTACATGATGATCGATGGTGTTTTTAGAGGCAATC
TTGAACAAGTCAAGGAATATCAGGACCTTTTGACACCTTTGCTTCATCAGACCACAGAAGGATATCCTGT
TGTGCCAAAGTACTATTATGTGCCAGCTGACTTTGTAGAATGTGAAAAAAGAAACCCTGGTAGTCAGAAG
CGGTTTCCAAGTAACTGTGGCCGTGATGGGAAGTTGTTTCTTTGGGGACAAGCTCTTTATATCATTGCAA
AACTCCTAGCTGATGAGTTAATCAGCCCTAAAGACATTGACCCTGTCCAGCGCTTTGTCCCACTTCAGAA
TCAACGTAACGTGAGCATGAGATACTCCAATCAGGGCCCACTGGAAAATGACTTGGTGGTTCATGTAGCA
CTTGTAGCAGAAAGCCAACGCCTTCAAGTTTTTCTCAATACATATGGTATTCAAACCCAAACTCCTCAGC
AGGTGGAACCCATTCAGATCTGGCCTCAGCAGGAGCTTGTAAAAGCTTATTTCCACCTGGGAATCAATGA
AAAGTTGGGTCTGTCTGGAAGGCCAGATAGGCCCATTGGCTGCCTTGGTACATCAAAGATTTATCGCATT
CTAGGAAAGACTGTGGTTTGTTACCCTATCATCTTTGACCTGAGTGATTTCTACATGTCTCAGGACGTTC
TGCTGCTCATAGATGACATAAAGAACGCACTACAGTTCATTAAGCAATATTGGAAAATGCATGGACGCCC
ACTTTTTCTTGTTCTCATCCGAGAAGACAACATAAGAGGTAGCAGATTCAACCCAATATTAGACATGCTG
GCAGCCTTTAAAAAGGGAATAATTGGAGGAGTCAAAGTTCATGTTGATCGTTTACAGACATTGATATCCG
GAGCTGTAGTAGAGCAGCTTGACTTTCTACGAATTAGTGACACAGAAAAGCTTCCAGAATTTAAGAGCTT
TGAAGAACTAGAATTTCCTAAGCATTCAAAAGTCAAACGGCAGAGCAGTACCGCAGATGCTCCTGAGGCG
CAACACGAGCCAGGCATCACCATTACCGAGTGGAAAAACAAATCCACCCACGAAATCCTTCAGAAGCTGA
ATGACTGCGGTTGTCTGGCTGGTCAAACCATCCTGCTGGGTATACTGCTCAAAAGAGAGGGCCCTAACTT
TATCACAATGGAAGGAACTGTGTCTGATCACATTGAGAGAGTGTATAGAAGAGCTGGCAGCAAAAAGCTT
TGGTCGGTTGTACGCCGTGCAGCAAGTCTTTTAAATAAAGTAGTGGACAGCCTGGCCCCATCCATTACTA
ATGTTTTAGTGCAGGGCAAACAGGTAACTCTAGGTGCCTTTGGACATGAAGAGGAGGTCATCTCTAACCC
ACTGTCTCCAAGAGTGATTAAGAACATAATCTATTATAAGTGCAATACCCACGATGAGAGGGAGGCAGTC
ATTCAGCAAGAACTGGTCATCCACATCGGCTGGATCATCTCCAACAGCCCTGAGTTGTTCAGCGGCATGC
TGAAAATACGCATTGGGTGGATCATCCACGCCATGGAGTATGAACTGCAGGTCCGGGGCGGGGATAAGCC
AGCTGTGGACTTGTACCAGCTCTCGCCCAGTGAAGTGAAGCAGCTGCTGCTAGACATTCTCCAGCCTCAA
CAGAGTGGAAGATGTTGGTTGAATAGACGTCAGATTGATGGGTCATTGAATAGAACACCCCCGGAATTCT
ATGACCGAGTGTGGCAGATCCTGGAACGCACACCTAATGGTATCGTTGTAGCTGGAAAGCATTTGCCACA
GCAACCAACTTTGTCGGATATGACCATGTATGAGATGAATTTTTCTCTCCTTGTTGAAGATATGCTGGGA
AACATTGACCAGCCAAAGTATAGACAGATCATAGTTGAGTTACTAATGGTCGTATCCATTGTGCTGGAAA
GAAACCCTGAACTGGAGTTTCAAGACAAAGTGGATCTGGACAGACTGGTTAAAGAAGCGTTTCATGAGTT
TCAAAAAGATGAGAGTCGGCTAAAAGAAATCGAAAAACAAGATGATATGACTTCCTTTTACAACACGCCC
CCACTGGGAAAAAGAGGAACCTGCAGCTACTTGACGAAGGTTGTGATGAACTCACTGCTCGAGGGAGAAG
TCAAGCCCAGCAATGAGGACTCCTGCCTGGTTAGCTAG

Translation (1085 aa):
MANSPDAAFSSPALLRSGSVYEPLKSINLPRPDNETLWDKLDHYYRIVKSTMLMYQSPTTGLFPTKTCGG
EEKSKVHESLYCAAGAWALALAYRRIDDDKGRTHELEHSAIKCMRGILYCYMRQADKVQQFKQDPRPTTC
LHSVFSVHTGDELLSYEEYGHLQINAVSLFLLYLVEMISSGLQIIYNTDEVSFIQNLVFCVERVYRVPDF
GVWERGSKYNNGSTELHSSSVGLAKAALEAINGFNLFGNQGCSWSVIFVDLDAHNRNRQTLCSLLPRESR
SHNTDAALLPCISYPAFALDDEALFSQTLDKVIRKLKGKYGFKRFLRDGYRTPLEDPNRRYYKPAEIKLF
DGIECEFPIFFLYMMIDGVFRGNLEQVKEYQDLLTPLLHQTTEGYPVVPKYYYVPADFVECEKRNPGSQK
RFPSNCGRDGKLFLWGQALYIIAKLLADELISPKDIDPVQRFVPLQNQRNVSMRYSNQGPLENDLVVHVA
LVAESQRLQVFLNTYGIQTQTPQQVEPIQIWPQQELVKAYFHLGINEKLGLSGRPDRPIGCLGTSKIYRI
LGKTVVCYPIIFDLSDFYMSQDVLLLIDDIKNALQFIKQYWKMHGRPLFLVLIREDNIRGSRFNPILDML
AAFKKGIIGGVKVHVDRLQTLISGAVVEQLDFLRISDTEKLPEFKSFEELEFPKHSKVKRQSSTADAPEA
QHEPGITITEWKNKSTHEILQKLNDCGCLAGQTILLGILLKREGPNFITMEGTVSDHIERVYRRAGSKKL
WSVVRRAASLLNKVVDSLAPSITNVLVQGKQVTLGAFGHEEEVISNPLSPRVIKNIIYYKCNTHDEREAV
IQQELVIHIGWIISNSPELFSGMLKIRIGWIIHAMEYELQVRGGDKPAVDLYQLSPSEVKQLLLDILQPQ
QSGRCWLNRRQIDGSLNRTPPEFYDRVWQILERTPNGIVVAGKHLPQQPTLSDMTMYEMNFSLLVEDMLG
NIDQPKYRQIIVELLMVVSIVLERNPELEFQDKVDLDRLVKEAFHEFQKDESRLKEIEKQDDMTSFYNTP
PLGKRGTCSYLTKVVMNSLLEGEVKPSNEDSCLVS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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