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Report for CCDS22777.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22777.1 Public Mus musculus 8 Exoc8 23 108 98 CCDS HistoryNCBI Gene:102058Re-query CCDS DB by CCDS ID:22777.1Re-query CCDS DB by GeneID:102058See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22777.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000098312.3 ENSMUSP00000095915.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000098312.3Link to Ensembl Protein Viewer:ENSMUSP00000095915.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000098312Re-query CCDS DB by Protein ID:ENSMUSP00000095915
Original member Current member NCBI NM_198103.2 NP_932771.1 Accepted alive Link to Nucleotide Sequence:NM_198103.2Link to Protein Sequence:NP_932771.1Re-query CCDS DB by Nucleotide ID:NM_198103Re-query CCDS DB by Protein ID:NP_932771Link to BLAST:NP_932771.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_932771.1 716 Q6PGF7 716 100% 0 0

Chromosomal Locations for CCDS 22777.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 124895476 124897626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2151 nt):
ATGTCGGACAGCGGGGCGAGCCGCCTGCGGAGGCAGCTGGAGTCGGGGGGCTTCGAGGCGCGGCTGTACG
TGAAGCAACTGTCGCAGCAGTCGGACGGCGACCGCGACCTGCAGGAGCACCGGCAGCGGGTGCAGGCGCT
GGCAGAGGAGACGGCACAGAACCTGAAGCGCAACGTCTACCAGAACTACCGGCAGTTCATCGAGACGGCG
CGGGAGATCTCCTACCTGGAGAGCGAAATGTACCAGCTGAGCCACCTGCTGACTGAGCAGAAGAGCAGCC
TGGAGAGCATCCCGCTGGCACTGCTGCCCGCCGCCGCCGCGGGCGCCTCTGCGGGTGAGGACACGGCCGG
CGCGGGGCCGCGGGAGCGCGGGGCGGTCCAGGCGGGCTTCCTGCCCGGGCCGGCGGGCGTCCCTCGAGAG
GGTTCCGGGACGGGCGAGGAGGGCAAGCAGCGAACGCTCACCACGCTGCTGGAGAAGGTGGAGGGCTGCA
GGGACCTGTTGGAGACGCCAGGTCAGTACCTGGTGTACAACGGGGACCTGGTGGAATACGATGCGGACCA
CATGGCCCAGCTGCAGCGCGTGCACGGCTTCCTCATGAACGACTGTCTGCTGGTGGCCACCTGGCTGCCA
CAACGGCGAGGCATGTACCGCTACAACGCACTCTACCCGCTGGACCGCCTGGCGGTGGTCAACGTCAAAG
ACAATCCGCCCATGAAAGACATGTTCAAGCTTCTCATGTTCCCCGAGAGCCGAATCTTCCAGGCGGAAAA
TGCCAAGATCAAGCGCGAGTGGCTGGAAGTGCTGGAGGAAACCAAGAGGGCCCTCAGCGACAAGAGGAGG
CGGGAGCAGGAGGAGGCAGCAGCCCCGCGTGCGCCACCACCGGTCACTTCCAAGGGCAGCAACCCGTTTG
AGGACGAGGATGATGAAGAACTGGCCACCCCTGAGGCGGAGGAGGAAAAGGTTGACCTTTCCATGGAGTG
GATCCAAGAGCTGCCGGAAGACTTGGATGTTTGTATTGCACAGAGGGACTTTGAGGGTGCCGTGGACTTG
CTGGACAAATTAAATCACTACCTGGAAGATAAGCCCAGCCCACCTCCTGTGAAAGAGCTGAGGGCCAAAG
TGGACGAACGAGTGCGACAGCTCACCGAGGTGCTTGTGTTTGAGCTCTCCCCGGATCGCTCTCTGAGAGG
CGGCCCCAAGGCTACTCGGAGAGCCGTGTCTCAGCTGATCCGGCTGGGCCAGTGCACGAAGGCTTGCGAG
CTGTTTCTGAGGAACAGGGCCGCAGCCGTGCACACTGCCATCCGCCAGCTCAGGATTGAGGGCGCCACGC
TGCTCTACATTCACAAGCTGTGCCACGTCTTCTTTACCAGCCTCCTAGAGACCGCGAGAGAGTTTGAGAC
GGACTTTGCAGGCACTGACAGTGGCTGCTACTCTGCCTTTGTGGTCTGGGCAAGGTCGGCCATGGGCATG
TTCGTGGATGCTTTCAGCAAGCAGGTTTTTGACAGCAAGGAGAGCCTGTCCACCGCTGCTGAGTGTGTGA
AGGTGGCCAAGGAGCACTGCCAGCAGCTGGGAGAGATTGGGCTGGACCTCACCTTCATCATCCACGCCCT
GCTGGTGAAGGACATCCAGGGCGCCCTGCACAGTTACAAGGAGATTATCATTGAAGCCACCAAGCACCGA
AACTCGGAGGAGATGTGGCGCCGCATGAACCTGATGACTCCTGAGGCCCTGGGCAAGCTCAAGGAGGAGA
TGAAAAGTTGCGGGGTCAGTAACTTTGAGCAGTACACGGGAGATGACTGCTGGGTGAACTTGAGCTACAC
GGTGGTAGCCTTCACCAAGCAGACTATGGGCTTCCTGGAGGAGGCATTGAAACTGTACTTCCCTGAGCTC
CACATGGTGCTCCTGGAGAGCCTGGTAGAAATCATCCTGGTGGCTGTGCAGCATGTGGACTACAGCCTGC
GCTGTGAGCAGGACCCCGAGAAGAAGGCCTTCATCAGGCAGAACGCATCCTTTCTCTATGAAACTGTCCT
CCCGGTGGTGGAGAGGAGGTTTGAGGAAGGTGTGGGGAAGCCCGCCAAGCAGCTGCAGGACCTCCGGAAC
GCATCCCGGCTCCTGCGGGTGAATCCCGAGAGCACGACTTCTGTGGTCTGA

Translation (716 aa):
MSDSGASRLRRQLESGGFEARLYVKQLSQQSDGDRDLQEHRQRVQALAEETAQNLKRNVYQNYRQFIETA
REISYLESEMYQLSHLLTEQKSSLESIPLALLPAAAAGASAGEDTAGAGPRERGAVQAGFLPGPAGVPRE
GSGTGEEGKQRTLTTLLEKVEGCRDLLETPGQYLVYNGDLVEYDADHMAQLQRVHGFLMNDCLLVATWLP
QRRGMYRYNALYPLDRLAVVNVKDNPPMKDMFKLLMFPESRIFQAENAKIKREWLEVLEETKRALSDKRR
REQEEAAAPRAPPPVTSKGSNPFEDEDDEELATPEAEEEKVDLSMEWIQELPEDLDVCIAQRDFEGAVDL
LDKLNHYLEDKPSPPPVKELRAKVDERVRQLTEVLVFELSPDRSLRGGPKATRRAVSQLIRLGQCTKACE
LFLRNRAAAVHTAIRQLRIEGATLLYIHKLCHVFFTSLLETAREFETDFAGTDSGCYSAFVVWARSAMGM
FVDAFSKQVFDSKESLSTAAECVKVAKEHCQQLGEIGLDLTFIIHALLVKDIQGALHSYKEIIIEATKHR
NSEEMWRRMNLMTPEALGKLKEEMKSCGVSNFEQYTGDDCWVNLSYTVVAFTKQTMGFLEEALKLYFPEL
HMVLLESLVEIILVAVQHVDYSLRCEQDPEKKAFIRQNASFLYETVLPVVERRFEEGVGKPAKQLQDLRN
ASRLLRVNPESTTSVV


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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