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Report for CCDS22913.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22913.1 Public Mus musculus 9 Tmem205 23 108 98 CCDS HistoryNCBI Gene:235043Re-query CCDS DB by CCDS ID:22913.1Re-query CCDS DB by GeneID:235043See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22913.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000046831.10 ENSMUSP00000048832.9 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000046831.10Link to Ensembl Protein Viewer:ENSMUSP00000048832.9Re-query CCDS DB by Nucleotide ID:ENSMUST00000046831Re-query CCDS DB by Protein ID:ENSMUSP00000048832
Original member Current member EBI ENSMUST00000213698.1 ENSMUSP00000150045.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000213698.1Link to Ensembl Protein Viewer:ENSMUSP00000150045.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000213698Re-query CCDS DB by Protein ID:ENSMUSP00000150045
Original member Current member EBI ENSMUST00000238930.1 ENSMUSP00000158874.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000238930.1Link to Ensembl Protein Viewer:ENSMUSP00000158874.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000238930Re-query CCDS DB by Protein ID:ENSMUSP00000158874
Original member Current member NCBI NM_001253868.1 NP_001240797.1 Accepted alive Link to Nucleotide Sequence:NM_001253868.1Link to Protein Sequence:NP_001240797.1Re-query CCDS DB by Nucleotide ID:NM_001253868Re-query CCDS DB by Protein ID:NP_001240797Link to BLAST:NP_001240797.1
Original member Current member NCBI NM_001253869.1 NP_001240798.1 Accepted alive Link to Nucleotide Sequence:NM_001253869.1Link to Protein Sequence:NP_001240798.1Re-query CCDS DB by Nucleotide ID:NM_001253869Re-query CCDS DB by Protein ID:NP_001240798Link to BLAST:NP_001240798.1
Original member Current member NCBI NM_001253870.1 NP_001240799.1 Accepted alive Link to Nucleotide Sequence:NM_001253870.1Link to Protein Sequence:NP_001240799.1Re-query CCDS DB by Nucleotide ID:NM_001253870Re-query CCDS DB by Protein ID:NP_001240799Link to BLAST:NP_001240799.1
Original member Current member NCBI NM_178577.5 NP_848692.2 Accepted alive Link to Nucleotide Sequence:NM_178577.5Link to Protein Sequence:NP_848692.2Re-query CCDS DB by Nucleotide ID:NM_178577Re-query CCDS DB by Protein ID:NP_848692Link to BLAST:NP_848692.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001240797.1 189 Q91XE8 189 100% 0 0
NP_001240798.1 189 Q91XE8 189 100% 0 0
NP_001240799.1 189 Q91XE8 189 100% 0 0
NP_848692.2 189 Q91XE8 189 100% 0 0

Chromosomal Locations for CCDS 22913.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 21921044 21921349 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21925991 21926154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21926249 21926348 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (570 nt):
ATGGAAAAAGGAGAGGACCCGGGAAGTCTGATTAAAGTCATCCACTTGCTGGTCTTGTCTGGTGCCTGGG
GCATGCAGGTGTGGGTGACCTTTATCTCAGGCTTCCTGCTTTTTCGGAGCCTCCCGCGGCACACATTTGG
ACTGGTGCAGAGCAAGGTCTTCCCAGTCTATTTTCACGTCTCCTTGGGCTGTGCCTTCATCAACCTCTGC
ATCTTGGCACCACAGCGAGCCTGGATTCACCTCACACTGTGGGAAGTCAGTCAGCTTTCCCTGCTGCTTC
TGAGCCTCACACTGGCCACCATCAATGCTCGCTGGCTTGAGGCTCGCACCACGGCTGTCATGCGGGCCCT
GCAGAGCATAGAGAAAGAGCGGGGCCTGGGGACAGAGGTGCCAGGCAACTTCCAGGGCCCTGATCCCTAC
CGCCAGCTGCGGGACAAGGACCCCAAGTACAGTGCTCTACGCCGGAAGTTCTACCACTACCATGGCCTGT
CTTCCCTCTGCAACCTGGGGTGCCTGCTGAGCAATGGGCTCTGCCTTGTGGGCCTTGCCCTGGGACTCAG
GAGCCTCTAA

Translation (189 aa):
MEKGEDPGSLIKVIHLLVLSGAWGMQVWVTFISGFLLFRSLPRHTFGLVQSKVFPVYFHVSLGCAFINLC
ILAPQRAWIHLTLWEVSQLSLLLLSLTLATINARWLEARTTAVMRALQSIEKERGLGTEVPGNFQGPDPY
RQLRDKDPKYSALRRKFYHYHGLSSLCNLGCLLSNGLCLVGLALGLRSL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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