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Report for CCDS23801.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23801.1 Public Mus musculus 10 Wasf1 23 108 98 CCDS HistoryNCBI Gene:83767Re-query CCDS DB by CCDS ID:23801.1Re-query CCDS DB by GeneID:83767See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 23801.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000019975.13 ENSMUSP00000019975.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000019975.13Link to Ensembl Protein Viewer:ENSMUSP00000019975.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000019975Re-query CCDS DB by Protein ID:ENSMUSP00000019975
Original member Current member EBI ENSMUST00000105509.1 ENSMUSP00000101148.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000105509.1Link to Ensembl Protein Viewer:ENSMUSP00000101148.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000105509Re-query CCDS DB by Protein ID:ENSMUSP00000101148
Original member Current member NCBI NM_031877.3 NP_114083.1 Accepted alive Link to Nucleotide Sequence:NM_031877.3Link to Protein Sequence:NP_114083.1Re-query CCDS DB by Nucleotide ID:NM_031877Re-query CCDS DB by Protein ID:NP_114083Link to BLAST:NP_114083.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_114083.1 559 Q8R5H6 559 100% 0 0

Chromosomal Locations for CCDS 23801.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 40920276 40920408 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 40926484 40926618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 40930631 40930784 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 40931916 40932033 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 40933113 40933285 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 40934477 40934656 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 40936110 40936738 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 40937646 40937803 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1680 nt):
ATGCCGTTGGTGAAAAGAAACATCGACCCTCGGCACTTGTGCCACACAGCACTGCCCAGGGGCATTAAGA
ACGAACTGGAATGTGTAACCAACATTTCCCTGGCAAATATAATTAGACAACTGAGTAGCCTAAGTAAGTA
TGCTGAAGACATATTTGGAGAATTATTCAATGAAGCACACAGTTTTTCCTTCAGAGTTAACTCGTTGCAA
GAGCGCGTGGACCGATTGTCTGTTAGTGTCACACAGCTTGATCCTAAGGAGGAAGAACTGTCTTTGCAAG
ATATAACGATGAGAAAGGCTTTCCGGAGCTCCACAATTCAAGATCAGCAGCTTTTCGACCGCAAGACGTT
GCCTATTCCATTGCAAGAAACATACGATGTGTGTGAGCAACCTCCGCCTCTCAATATCCTCACCCCTTAC
AGGGATGATGGTAAGGAAGGGCTGAAGTTTTATACCAATCCTTCATATTTCTTTGATCTGTGGAAAGAAA
AGATGTTGCAAGATACAGAGGACAAGAGGAAGGAAAAGAGAAAGCAGAAGCAGAAAAATCTAGACCGTCC
TCATGAACCAGAGAAAGTGCCAAGAGCACCTCATGACAGGCGGCGGGAATGGCAGAAGCTGGCCCAAGGT
CCAGAGCTGGCTGAGGATGACGCTGACCTCCTACACAAGCATATTGAAGTTGCCAATGGCCCAGCCTCTC
ATTATGAGACAAGGCCACAGACATACGTGGATCATATGGACGGATCGTACTCACTCTCTGCCTTGCCATT
CAGTCAGATGAGTGAACTTCTGACCAGAGCTGAGGAGAGGGTCTTAGTCAGACCCCATGAACCTCCTCCG
CCTCCACCAATGCATGGAGCAGGAGATGCAAAGCCCACACCCACCTGTATCAGTTCTGCTACAGGTTTGA
TAGAGAATCGCCCCCAGTCCCCAGCTGCAGGCAGAACACCTGTGTTTGTGAGCCCCACTCCCCCACCTCC
TCCCCCACCTCTTCCGTCTGCCTTGTCCACTTCTTCACTAAGAGCTTCAATGACCTCAACTCCTCCCCCA
CCAGTCCCTCCTCCGCCTCCTCCCCCAGCCACTGCTTTGCAGGCCCCAGCAGTGCCCCCACCTCCGGCTC
CTCTTCAGATTGCCCCTGGTGTTCTTCACCCAGCTCCTCCTCCAATTGCTCCTCCTCTAGTGCAGCCCTC
TCCCCCAGTAGCTCGAGCTGCCCCAGTATGCGAGACTGTGCCAGTTCACCCACTCCCGCAAGGTGAAGTG
CAGGGGCTGCCTCCACCCCCACCACCGCCTCCTCTACCTCCGCCTGGCATCCGGCCATCATCTCCTGTCG
CAGTTGCAGCTCTTGCTCATCCTCCCTCTGGGCTCCATCCAGCACCATCTACTGCCCCGGGTCCCCATGC
TCCATTAATGCCTCCATCTCCTCCATCACAAGTTCTACCTGCCTCTGAGCCAAAGCGCCATCCATCCACC
CTGCCTGTAATCAGTGACGCAAGGAGTGTGCTGCTGGAAGCCATCCGAAAAGGTATTCAGCTTCGCAAAG
TGGAAGAGCAGCGTGAACAGGAAGCAAAACACGAGCGGATTGAAAACGACGTGGCCACCATCCTGTCTCG
CCGCATTGCTGTGGAGTATAGCGACTCGGAAGATGACTCGGAGTTCGATGAAGTAGACTGGCTGGAGTAA

Translation (559 aa):
MPLVKRNIDPRHLCHTALPRGIKNELECVTNISLANIIRQLSSLSKYAEDIFGELFNEAHSFSFRVNSLQ
ERVDRLSVSVTQLDPKEEELSLQDITMRKAFRSSTIQDQQLFDRKTLPIPLQETYDVCEQPPPLNILTPY
RDDGKEGLKFYTNPSYFFDLWKEKMLQDTEDKRKEKRKQKQKNLDRPHEPEKVPRAPHDRRREWQKLAQG
PELAEDDADLLHKHIEVANGPASHYETRPQTYVDHMDGSYSLSALPFSQMSELLTRAEERVLVRPHEPPP
PPPMHGAGDAKPTPTCISSATGLIENRPQSPAAGRTPVFVSPTPPPPPPPLPSALSTSSLRASMTSTPPP
PVPPPPPPPATALQAPAVPPPPAPLQIAPGVLHPAPPPIAPPLVQPSPPVARAAPVCETVPVHPLPQGEV
QGLPPPPPPPPLPPPGIRPSSPVAVAALAHPPSGLHPAPSTAPGPHAPLMPPSPPSQVLPASEPKRHPST
LPVISDARSVLLEAIRKGIQLRKVEEQREQEAKHERIENDVATILSRRIAVEYSDSEDDSEFDEVDWLE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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