NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS2383.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2383.1 Public Homo sapiens 2 PTH2R 24 110 108 CCDS HistoryNCBI Gene:5746Re-query CCDS DB by CCDS ID:2383.1Re-query CCDS DB by GeneID:5746See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2383.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000272847.7 ENSP00000272847.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000272847.7Link to Ensembl Protein Viewer:ENSP00000272847.2Re-query CCDS DB by Nucleotide ID:ENST00000272847Re-query CCDS DB by Protein ID:ENSP00000272847
Original member Current member NCBI NM_005048.4 NP_005039.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005048.4Link to Protein Sequence:NP_005039.1Re-query CCDS DB by Nucleotide ID:NM_005048Re-query CCDS DB by Protein ID:NP_005039Link to BLAST:NP_005039.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005039.1 550 P49190 550 100% 0 0

Chromosomal Locations for CCDS 2383.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 208407044 208407118 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 208428201 208428303 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 208437537 208437647 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 208437760 208437881 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 208442364 208442461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 208443348 208443537 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 208444734 208444887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 208450749 208450809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 208459895 208459961 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 208481070 208481164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 208489012 208489150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 208490639 208490680 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 208493264 208493659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1653 nt):
ATGGCCGGGCTGGGGGCGTCGCTCCACGTCTGGGGTTGGCTAATGCTCGGCAGCTGCCTCCTGGCCAGAG
CCCAGCTGGATTCTGATGGCACCATTACTATAGAGGAGCAGATTGTCCTTGTGCTGAAAGCGAAAGTACA
ATGTGAACTCAACATCACAGCTCAACTCCAGGAGGGAGAAGGTAATTGTTTCCCTGAATGGGATGGACTC
ATTTGTTGGCCCAGAGGAACAGTGGGGAAAATATCGGCTGTTCCATGCCCTCCTTATATTTATGACTTCA
ACCATAAAGGAGTTGCTTTCCGACACTGTAACCCCAATGGAACATGGGATTTTATGCACAGCTTAAATAA
AACATGGGCCAATTATTCAGACTGCCTTCGCTTTCTGCAGCCAGATATCAGCATAGGAAAGCAAGAATTC
TTTGAACGCCTCTATGTAATGTATACCGTTGGCTACTCCATCTCTTTTGGTTCCTTGGCTGTGGCTATTC
TCATCATTGGTTACTTCAGACGATTGCATTGCACTAGGAACTATATCCACATGCACTTATTTGTGTCTTT
CATGCTGAGAGCTACAAGCATCTTTGTCAAAGACAGAGTAGTCCATGCTCACATAGGAGTAAAGGAGCTG
GAGTCCCTAATAATGCAGGATGACCCACAAAATTCCATTGAGGCAACTTCTGTGGACAAATCACAATATA
TCGGGTGCAAGATTGCTGTTGTGATGTTTATTTACTTCCTGGCTACAAATTATTATTGGATCCTGGTGGA
AGGTCTCTACCTGCATAATCTCATCTTTGTGGCTTTCTTTTCGGACACCAAATACCTGTGGGGCTTCATC
TTGATAGGCTGGGGGTTTCCAGCAGCATTTGTTGCAGCATGGGCTGTGGCACGAGCAACTCTGGCTGATG
CGAGGTGCTGGGAACTTAGTGCTGGAGACATCAAGTGGATTTATCAAGCACCGATCTTAGCAGCTATTGG
GCTGAATTTTATTCTGTTTCTGAATACGGTTAGAGTTCTAGCTACCAAAATCTGGGAGACCAATGCAGTT
GGGCATGACACAAGGAAGCAATACAGGAAACTGGCCAAATCGACACTGGTCCTGGTCCTAGTCTTTGGAG
TGCATTACATCGTGTTCGTATGCCTGCCTCACTCCTTCACTGGGCTCGGGTGGGAGATCCGCATGCACTG
TGAGCTCTTCTTCAACTCCTTTCAGGGTTTCTTTGTGTCTATCATCTACTGCTACTGCAATGGAGAGGTT
CAGGCAGAGGTGAAGAAGATGTGGAGTCGGTGGAACCTCTCCGTGGACTGGAAAAGGACACCGCCATGTG
GCAGCCGCAGATGCGGCTCAGTGCTCACCACCGTGACGCACAGCACCAGCAGCCAGTCACAGGTGGCGGC
CAGCACACGCATGGTGCTTATCTCTGGCAAAGCTGCCAAGATCGCCAGCAGACAGCCTGACAGCCACATC
ACTTTACCTGGCTATGTCTGGAGTAACTCAGAGCAGGACTGCCTGCCACACTCTTTCCACGAGGAGACCA
AGGAAGATAGTGGGAGGCAGGGAGATGATATTCTAATGGAGAAGCCTTCCAGGCCTATGGAATCTAACCC
AGACACTGAAGGATGCCAAGGAGAAACTGAGGATGTTCTCTGA

Translation (550 aa):
MAGLGASLHVWGWLMLGSCLLARAQLDSDGTITIEEQIVLVLKAKVQCELNITAQLQEGEGNCFPEWDGL
ICWPRGTVGKISAVPCPPYIYDFNHKGVAFRHCNPNGTWDFMHSLNKTWANYSDCLRFLQPDISIGKQEF
FERLYVMYTVGYSISFGSLAVAILIIGYFRRLHCTRNYIHMHLFVSFMLRATSIFVKDRVVHAHIGVKEL
ESLIMQDDPQNSIEATSVDKSQYIGCKIAVVMFIYFLATNYYWILVEGLYLHNLIFVAFFSDTKYLWGFI
LIGWGFPAAFVAAWAVARATLADARCWELSAGDIKWIYQAPILAAIGLNFILFLNTVRVLATKIWETNAV
GHDTRKQYRKLAKSTLVLVLVFGVHYIVFVCLPHSFTGLGWEIRMHCELFFNSFQGFFVSIIYCYCNGEV
QAEVKKMWSRWNLSVDWKRTPPCGSRRCGSVLTTVTHSTSSQSQVAASTRMVLISGKAAKIASRQPDSHI
TLPGYVWSNSEQDCLPHSFHEETKEDSGRQGDDILMEKPSRPMESNPDTEGCQGETEDVL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH