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Report for CCDS24138.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24138.1 Public Mus musculus 10 Nudt4 23 108 98 CCDS HistoryNCBI Gene:71207Re-query CCDS DB by CCDS ID:24138.1Re-query CCDS DB by GeneID:71207See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 24138.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000020217.6 ENSMUSP00000020217.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000020217.6Link to Ensembl Protein Viewer:ENSMUSP00000020217.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000020217Re-query CCDS DB by Protein ID:ENSMUSP00000020217
Original member Current member NCBI NM_027722.5 NP_081998.3 Accepted alive Link to Nucleotide Sequence:NM_027722.5Link to Protein Sequence:NP_081998.3Re-query CCDS DB by Nucleotide ID:NM_027722Re-query CCDS DB by Protein ID:NP_081998Link to BLAST:NP_081998.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_081998.3 179 Q8R2U6 179 100% 0 0

Chromosomal Locations for CCDS 24138.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 95549288 95549490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 95549776 95549860 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 95551449 95551493 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 95552486 95552596 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 95563662 95563757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (540 nt):
ATGAAGTTCAAGCCCAACCAGACGCGGACGTACGACCGCGAGGGCTTCAAGAAGAGGGCGGCCTGCCTGT
GCTTCCGCAGCGAGCAGGAGGACGAGGTGCTGCTGGTGAGTAGCAGTCGGTACCCAGACCAATGGATTGT
CCCAGGAGGAGGGATGGAGCCGGAGGAGGAGCCTGGCGGTGCTGCTGTGAGGGAAGTGTATGAAGAGGCT
GGAGTCAAAGGAAAGCTAGGCAGACTGCTCGGAATATTTGAGAATCAAGACCGGAAGCACAGAACATATG
TTTATGTTCTGACTGTCACTGAAATATTGGAAGACTGGGAAGACTCCGTGAATATAGGAAGGAAGAGAGA
GTGGTTCAAAGTAGAAGATGCAATCAAGGTTCTTCAGTGTCATAAGCCTGTCCACGCAGAGTATCTGGAA
AAACTAAAGCTGGGCTGTTCTCCGACCAATGGAAATTCCTCGGTCCCTTCCCTCCCAGATAACAATGCCT
TGTTTGTGACTGCTGCGCCGCCCTCTGGGGTGCCATCCAGTATAAGATAG

Translation (179 aa):
MKFKPNQTRTYDREGFKKRAACLCFRSEQEDEVLLVSSSRYPDQWIVPGGGMEPEEEPGGAAVREVYEEA
GVKGKLGRLLGIFENQDRKHRTYVYVLTVTEILEDWEDSVNIGRKREWFKVEDAIKVLQCHKPVHAEYLE
KLKLGCSPTNGNSSVPSLPDNNALFVTAAPPSGVPSSIR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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