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Report for CCDS24775.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24775.1 Public Mus musculus 11 Mprip 23 108 98 CCDS HistoryNCBI Gene:26936Re-query CCDS DB by CCDS ID:24775.1Re-query CCDS DB by GeneID:26936See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 24775.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000116371.7 ENSMUSP00000112072.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000116371.7Link to Ensembl Protein Viewer:ENSMUSP00000112072.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000116371Re-query CCDS DB by Protein ID:ENSMUSP00000112072
Original member Current member NCBI NM_012027.2 NP_036157.2 Accepted alive Link to Nucleotide Sequence:NM_012027.2Link to Protein Sequence:NP_036157.2Re-query CCDS DB by Nucleotide ID:NM_012027Re-query CCDS DB by Protein ID:NP_036157Link to BLAST:NP_036157.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036157.2 1024 P97434-1 1024 100% 0 0

Chromosomal Locations for CCDS 24775.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 59662826 59662948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59696126 59696203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59696958 59697023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59727552 59727703 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59731508 59731592 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59735830 59736064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59737072 59737228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59741120 59741261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59741991 59742098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59743771 59743827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59744752 59744820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59748547 59748636 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59749519 59749628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59752490 59753060 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59754993 59755109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59764380 59764527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59765408 59765525 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59766728 59766887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59767955 59768074 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59769213 59769299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59769884 59770046 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59771617 59771702 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59772152 59772184 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3075 nt):
ATGTCGGCGGCCAAGGAAAACCCGTGCAGGAAATTTCAGGCCAACATCTTCAACAAGAGCAAGTGTCAGA
ACTGCTTCAAGCCCCGCGAGTCGCATCTGCTCAACGACGAGGACCTGACGCAGGCAAAACCCATTTATGG
TGGCTGGCTGCTCCTGGCTCCAGATGGCACTGACTTTGACAACCCAGTGCACCGGTCACGGAAATGGCAG
CGACGATTCTTCATCCTTTATGAGCATGGCCTCTTGCGATATGCCCTGGATGAGATGCCCACCACCCTCC
CTCAGGGCACCATCAACATGAACCAGTGCACAGATGTGGTGGATGGGGAGGCCCGCACAGGGCAGAAGTT
CTCCCTCTGCATCCTGACACCTGACAAGGAACATTTTATCAGGGCAGAAACCAAGGAGATCATCAGTGGG
TGGTTAGAGATGCTCATGGTGTATCCTCGAACCAACAAGCAGAACCAGAAGAAGAAACGGAAAGTAGAGC
CACCTACCCCACAGGAGCCTGGGCCTGCTAAGATGGCTGTCACTAGCAGTAGTGGCGGCAGCAGTGGTAG
CAGCAGCAGCATTCCCAGTGCTGAGAAAGTTCCCACCACCAAATCCACACTCTGGCAGGAAGAAATGAGA
GCCAAAGACCAACCTGATGGGACCAGCCTGAGTCCAGCTCAAAGTCCCAGCCAAAGCCAGCCTCCTGCTG
CTTGCACCCCACGGGAACCAGGACTAGAAAGCAAAGAAGATGAAAGCACCATAAGTGGGGACCGTGTGGA
TGGTGGTCGGAAAGTACGGGTAGAGAGCGGCTACTTCTCCCTGGAGAAGGCCAAGCAGGACCTGAGGGCT
GAGGAGCAGCTGCCCCCACTACTCTCCCCACCCAGCCCCAGCACCCCACACAGCAGGAGGTCCCAGGTAA
TTGAGAAATTTGAGGCCTTGGACATTGAAAAAGCAGAGCACATGGAAACCAACATGCTGATTCTGACCAC
TCCATCAAGTGACACTCGTCAGGGCCGCAGTGAGAGACGGGCCATCCCTAGAAAGCGGGACTTTGCCAGC
GAAGCCCCCACAGCTCCTCTCTCAGATGCTTGTCCCCTGTCTCCACACCGAAGAGCCAAGTCATTGGACA
GGAGGTCCACAGAATCCTCCATGACGCCTGACCTGCTGAATTTCAAGAAAGGCTGGCTAACCAAGCAGTA
TGAGGATGGCCAGTGGAAGAAACACTGGTTTGTCCTGGCAGATCAGAGCCTGAGATACTACAGGGATTCC
GTGGCTGAGGAGGCAGCTGACCTAGATGGAGAAATTAACTTGTCCACTTGCTATGATGTCACTGAGTATC
CAGTCCAGAGAAACTATGGCTTTCAGATACATACCAAGGAGGGTGAGTTCACCCTCTCAGCCATGACATC
TGGCATACGACGGAACTGGATCCAGACCATTATGAAACATGTGCTCCCAGCATCTGCCCCAGATGTGACC
AGCTCATTGCCTGAGGGAAAGAATAAAAGCACATCTTTTGAGACCTGCTCAAGGTCAACTGAGAAGCAAG
AAGCTGAGCCAGGAGAGCCAGATCCTGAACAAAAGAAGAGCCGTGCTCGAGAGCGGAGGCGGGAGGGTCG
CTCCAAGACCTTTGACTGGGCTGAATTCCGCCCTATACAACAGGCCCTGGCTCAAGAAAGGGCCAGCGCT
GTTGGGTCTTCTGATTCTGGTGACCCTGGGTGTCTTGAAGCCGAGCCAGGTGAGCTGGAGCGTGAACGAG
CTCGACGTCGAGAAGAACGCCGCAAGCGCTTTGGGATGCTGGACACCATTGATGGACCAGGAATGGAGGA
CACAGCCCTACGTATGGACATCGACCGGAGCCCAGGGCTGCTGGGAACCCCTGACCTCAAGACACAGAAT
GTCCACGTGGAAATTGAGCAGCGTTGGCATCAAGTGGAGACCACCCCTCTCAGGGAGGAGAAACAGGTGC
CCATTGCCCCTCTGCACCTATCCTTGGAGGACAGAAGTGAGCGGCTCTCCACACATGAGCTCACCTCTCT
GCTAGAGAAGGAGCTGGAGCAGAGCCAGAAAGAAGCCTCGGATCTTCTAGAGCAGAACCGGCTTCTACAG
GACCAGTTAAGGGTGGCCCTGGGCAGAGAACAGAGTGCCCGGGAGGGCTATGTGCTGCAGGCTACATGTG
AGCGAGGCTTTGCCGCCATGGAGGAGACACATCAGAAGAAGATTGAAGACCTACAGAGGCAACACCAGCG
GGAGCTAGAGAAGCTGCGGGAGGAAAAAGACCGCCTCCTGGCTGAGGAGACAGCTGCCACCATATCAGCC
ATTGAAGCCATGAAGAATGCTCACCGAGAGGAGATGGAACGAGAGTTAGAGAAGAGCCAGCGGTCTCAGA
TCAGCAGCATCAATTCAGACATAGAAGCCCTGAGGCGACAGTACCTGGAGGAGCTGCAGTCAGTGCAGCG
GGAGCTGGAAGTCCTTTCAGAGCAGTACTCCCAAAAGTGCCTGGAGAATGCACACCTAGCCCAGGCGCTG
GAGGCCGAGCGTCAGGCCCTGCGGCAATGCCAGCGTGAGAACCAGGAGCTCAACGCCCACAACCAGGAGC
TGAATAACCGCCTGGCTGCGGAGATCACACGGTTGCGGACACTACTGACTGGAGACGGTGGTGGGGAGTC
CACTGGGTTGCCTCTCACACAGGGCAAGGATGCCTATGAGTTAGAGGTCTTGTTGCGGGTCAAAGAGTCA
GAAATCCAGTACCTGAAACAGGAGATCAGCTCCCTCAAGGATGAACTCCAGACAGCCCTGCGGGATAAGA
AGTATGCTAGTGACAAGTACAAAGACATCTACACTGAGCTCAGCATTGCCAAGGCCAAGGCTGACTGCGA
CATCAGCAGGCTGAAGGAGCAGCTGAAAGCAGCCACAGAGGCACTGGGCGAGAAATCTCCTGAAGGCACT
ACTGTGTCAGGATATGACATAATGAAATCTAAAAGCAATCCTGACTTCCTGAAGAAAGACAGATCCTGTG
TTACCCGGCAACTCAGAAACATCAGGTCCAAGTCCGTAATTGAGCAGGTCTCATGGGATAACTGA

Translation (1024 aa):
MSAAKENPCRKFQANIFNKSKCQNCFKPRESHLLNDEDLTQAKPIYGGWLLLAPDGTDFDNPVHRSRKWQ
RRFFILYEHGLLRYALDEMPTTLPQGTINMNQCTDVVDGEARTGQKFSLCILTPDKEHFIRAETKEIISG
WLEMLMVYPRTNKQNQKKKRKVEPPTPQEPGPAKMAVTSSSGGSSGSSSSIPSAEKVPTTKSTLWQEEMR
AKDQPDGTSLSPAQSPSQSQPPAACTPREPGLESKEDESTISGDRVDGGRKVRVESGYFSLEKAKQDLRA
EEQLPPLLSPPSPSTPHSRRSQVIEKFEALDIEKAEHMETNMLILTTPSSDTRQGRSERRAIPRKRDFAS
EAPTAPLSDACPLSPHRRAKSLDRRSTESSMTPDLLNFKKGWLTKQYEDGQWKKHWFVLADQSLRYYRDS
VAEEAADLDGEINLSTCYDVTEYPVQRNYGFQIHTKEGEFTLSAMTSGIRRNWIQTIMKHVLPASAPDVT
SSLPEGKNKSTSFETCSRSTEKQEAEPGEPDPEQKKSRARERRREGRSKTFDWAEFRPIQQALAQERASA
VGSSDSGDPGCLEAEPGELERERARRREERRKRFGMLDTIDGPGMEDTALRMDIDRSPGLLGTPDLKTQN
VHVEIEQRWHQVETTPLREEKQVPIAPLHLSLEDRSERLSTHELTSLLEKELEQSQKEASDLLEQNRLLQ
DQLRVALGREQSAREGYVLQATCERGFAAMEETHQKKIEDLQRQHQRELEKLREEKDRLLAEETAATISA
IEAMKNAHREEMERELEKSQRSQISSINSDIEALRRQYLEELQSVQRELEVLSEQYSQKCLENAHLAQAL
EAERQALRQCQRENQELNAHNQELNNRLAAEITRLRTLLTGDGGGESTGLPLTQGKDAYELEVLLRVKES
EIQYLKQEISSLKDELQTALRDKKYASDKYKDIYTELSIAKAKADCDISRLKEQLKAATEALGEKSPEGT
TVSGYDIMKSKSNPDFLKKDRSCVTRQLRNIRSKSVIEQVSWDN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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