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Report for CCDS24800.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24800.1 Public Mus musculus 11 Dhrs7b 23 108 98 CCDS HistoryNCBI Gene:216820Re-query CCDS DB by CCDS ID:24800.1Re-query CCDS DB by GeneID:216820See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 24800.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000042281.13 ENSMUSP00000044924.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000042281.13Link to Ensembl Protein Viewer:ENSMUSP00000044924.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000042281Re-query CCDS DB by Protein ID:ENSMUSP00000044924
Original member Current member NCBI NM_145428.2 NP_663403.1 Accepted alive Link to Nucleotide Sequence:NM_145428.2Link to Protein Sequence:NP_663403.1Re-query CCDS DB by Nucleotide ID:NM_145428Re-query CCDS DB by Protein ID:NP_663403Link to BLAST:NP_663403.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_663403.1 323 Q99J47-1 323 100% 0 0

Chromosomal Locations for CCDS 24800.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 60830712 60830731 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 60844165 60844343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 60849101 60849204 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 60851742 60851958 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 60852419 60852511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 60855700 60855852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 60857718 60857923 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (972 nt):
ATGATCTCTCCGTCCTTTAGGAAAGGTATGCTGAAGGAGAGGGTCATGGACTTGGCCTCCCAGACGACCA
TCCTGCCCCTGCTGTTTGGCTGCCTGGGGATTTTCAGCCTCTTCAGGCTGCTGCAGAGGATCCGCTCAAA
GGCTTACCTGAGGAATGCTGTGGTGGTAGTCACGGGCGCCACCTCAGGTCTCGGCAGAGAATGTGCCAAA
GTCTTCCATGCTGCGGGGGCTAAACTGGTCCTCTGTGGACGAAATGTGAAGGCCCTGGAGGAGCTCAGCC
GGGAACTTGCTGGTTCTTCTCAGGGACAGACACACCAACCCTTCGTGGTGACCTTTGACCTCGCGGATCC
TGGTACTATTGCTGCTGCAGCAGCTGAGATCCTCCAGTGCTTTGGCTATGTGGACGTTCTCATCAATAAT
GCTGGGATTAGCTACCGTGGTACCATTAGTGATACCATAGTGGACGTGGACCGGAAGGTGATGGAAATAA
ACTACTTTGGCCCTGTTGCTCTAACAAAAGCGCTCCTACCCTCCATGGTGGAAAGGAAGCAAGGCCACAT
CGTCGCCATCAGCAGCATCCAGGGCAAGATCAGCATTCCTTTCCGATCGGCATATTCAGCCTCCAAGCAT
GCAACCCAGGCATTCTTTGACTGTCTGCGTGCAGAGATGGAAGAGGCTAACATCAAGGTGACTGTGATAA
GCCCTGGCTACATCCATACCAACCTCTCTGTAAATGCTGTCACTGCCGATGGCTCCAGATATGGAGCTCT
AGACAAGAACACAGCCCAGGGCCGAAGCGCTGCAGAGGTGGCCCAGGATGTCTTTGATGCTGTGGGGAAG
AAGAAAAAAGATGTTCTCCTGACAGACTTTGTGCCATCCATGGCTGTCTACATCAGAACTCTGGCTCCCG
GGCTCTTCTTCAGAATCATGGCCTCTCGGGCCAGAAAAGAGCGGAAATCCAAGAGCTCCTGA

Translation (323 aa):
MISPSFRKGMLKERVMDLASQTTILPLLFGCLGIFSLFRLLQRIRSKAYLRNAVVVVTGATSGLGRECAK
VFHAAGAKLVLCGRNVKALEELSRELAGSSQGQTHQPFVVTFDLADPGTIAAAAAEILQCFGYVDVLINN
AGISYRGTISDTIVDVDRKVMEINYFGPVALTKALLPSMVERKQGHIVAISSIQGKISIPFRSAYSASKH
ATQAFFDCLRAEMEEANIKVTVISPGYIHTNLSVNAVTADGSRYGALDKNTAQGRSAAEVAQDVFDAVGK
KKKDVLLTDFVPSMAVYIRTLAPGLFFRIMASRARKERKSKSS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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