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Report for CCDS25807.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
25807.1 Public Mus musculus 12 Wdr35 23 108 98 CCDS HistoryNCBI Gene:74682Re-query CCDS DB by CCDS ID:25807.1Re-query CCDS DB by GeneID:74682See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 25807.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000085745.12 ENSMUSP00000082895.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000085745.12Link to Ensembl Protein Viewer:ENSMUSP00000082895.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000085745Re-query CCDS DB by Protein ID:ENSMUSP00000082895
Original member Current member NCBI NM_172470.3 NP_766058.3 Accepted alive Link to Nucleotide Sequence:NM_172470.3Link to Protein Sequence:NP_766058.3Re-query CCDS DB by Nucleotide ID:NM_172470Re-query CCDS DB by Protein ID:NP_766058Link to BLAST:NP_766058.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_766058.3 1181 Q8BND3-1 1181 100% 0 0

Chromosomal Locations for CCDS 25807.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 8974156 8974179 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 8974934 8975051 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 8977363 8977434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 8978598 8978690 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 8981032 8981160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 8982761 8982894 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 8985629 8985794 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 8985967 8986112 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 8987278 8987403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 8989905 8990090 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 8995640 8995672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 8996069 8996129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 9003997 9004141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 9005763 9005832 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 9006720 9006773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 9008002 9008111 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 9008479 9008689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 9012661 9012741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 9015970 9016106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 9016437 9016640 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 9018086 9018232 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 9019878 9020010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 9021730 9021840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 9022719 9022883 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 9024194 9024334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 9024886 9025042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 9027483 9027723 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 9028006 9028156 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3546 nt):
ATGTTCTTCTACCTGAGCAAGAAAATTGCTGTTCCCAATAATGTGAAGCTGAAATGTATATCCTGGAACA
AGGACCAAGGGTTCATAGCATGTGGCGGTGAGGATGGATTACTGAAAGTTTTAAGACTCGAGACACAGAC
AGATGACTCAAAGCTGAGGGGTCTAGCCGCCCCTAGTAACCTTTCCATGAACCAAAATCTTGAAGGTCAT
AGTGGTGCTGTTCAAGTTGTAACGTGGAATGAACAGTATCAGAAGTTGACTACCAGTGATCAAAATGGGC
TTATCATTGTCTGGATGCTGTATAAAGGCTCTTGGTATGAGGAGATGATCAACAATCGCAACAAGTCTGT
GGTTCGAAGCATGAGCTGGAATGCGGACGGACAGAAGATCTGCATTGTGTACGAAGATGGAGCTGTGATC
GTCGGCTCAGTAGACGGGAATCGGATTTGGGGGAAAGACCTGAAGGGAATTCAGCTGTGCCATGTGACCT
GGTCTGCAGATAGTAAAATCCTACTTTTTGGAATGGCAAATGGAGAAATACACATTTATGATAATCAAGG
AAATTTTATAATGAAAATGAAGCTGAATTGCTTGGTGAACGTCACTGGAGCGATCAGTATCGCTGGGATT
CACTGGTACCATGGCACCGAAGGCTACGTGGAGCCCGATTGCCCTTGCCTGGCAATTTGCTTTGACAATG
GGAGATGCCAAATAATGCGGCATGAGAATGACCAAAACCCGGTTTTGATCGACACGGGCATGTATGTGGT
AGGCATCCAGTGGAACCACATCGGCAGTGTGTTAGCTGTGGCCGGCTCCCAGAAGGTAGTCACTCAGGAC
AAGGACATCAACATCGTGCAGTTCTACACACCGTTCGGTGAGCATCTGGGTACTTTGAAAGTTCCAGGAA
AGCAGATGTGTTCGCTGTCTTGGGAAGGAGGCGGACTGAAGATTGCTCTAGCTGTTGACTCCTTTATATA
TTTTGCAAATATTCGACCTGATTATAAGTGGGGCTACTGTTCCAACACAGTGGTTTATGCGTACACCAGA
CCCGATCGTCCCGAATACTGTGTTGTGTTCTGGGACACAAAAAACAGTGAGAAATACGTTAAATATGTGA
AGAGCCTCATTTCTATCACCACGTGTGGAGATTTCTGCATTTTGGCTACAAAAGCTGATGAGAATCACCC
TCAGGAGGAGAATGAAATGGAGACATTTGGTGCAACGTTTGTGCTTGTCCTTTGCAATTCTATTGGCACA
CCCTTGGACCCTAAATACATTGATCTTGTACCATTATTTGTTGCAATGACCAAAACCCATGTGATAGCAG
CTTCAAAAGAAGCATTTTATACCTGGCAATATCGTGTGGCAAAGAAGCTCACAGCACTGGAAATTAATCA
GATCACACGGTCTCGAAAAGAAGGAAGAGAAAGAATTTATCACGTTGATGATGTCCCTTCCGGATCTGTG
GATGGGGTGTTTGATTACAGTAAAGCCATTCAAGGTACAAGGGATCCAATTTGTGCCATTACTGCATCTG
ATAAGACATTGATTGTGGGGCGTGAATCTGGCGTCATTCAGAGGTACAGCTTTCCTAATGTTGCTCTGAT
TCAAAAGTATTCCCTGGATTGCCGTGCCTGCCAGTTATCTCTGAACTGCAACTCCAGTCGTCTTGCTATC
ATCGACATCGCTGGAGTCTTGACTTTCTTTGACTTGGACACTCGGGTGACCGACAGTACAGGGCAGCAGG
TCGTTGGCGAGTTGCTAAAACTGGAGCGCAAAGACGTCTGGGATATGAAGTGGGCCAAGGACAATCCTGA
TTTGTTTGCAATGATGGAGAAGACGAGAATGTATGTTTTCAGAAACTTGGATCCTGAGGAACCCATTCAG
ACCTCTGGATATATTTGCAACTTTGAGGATTTGGAAATTAAGTCTGTTCTCTTGGATGAGATACTGAAGG
ACCCAGAGCACCCTAGCAAGGATTACATAATGAACTTTGAGATCCGGTCCCTGCGAGACAGCCGAGCATT
GATTGAGAAAGTTGGAATTGAAGATGCGTCTCAGTTCATAGAGGACAACCCACACCCCCGACTTTGGCGC
CTGCTGGCTGAAGCTGCTCTCCAGAAGCTGGACCTGTACACCGCACAGCAAGCGTTTGTGCGCTGCAAGG
ATTACCAAGGCATCAAGTTTGTGAAGCTCCTGGGCAATCTGCAGAGCGAGTCAATGAAGCAGGCTGAAGT
TATTGCCTACTTTGGCAGGTTCGAAGATGCCGAAAGGATGTATCAAGATATGGACAGACGGGACCTCGCT
ATTGGTCTCAGAATGAAATTGGGGGACTGGTTCAGAGTACTGCAGCTCCTGAAAACTGGATCTGGTGATG
CAGACGACAGTCTCCTTGAACAAGCTAACAATGCCATTGGAGAGTACTTTGCTGACCGACAGAAGTGGCA
GAATGCTGTGCAATATTATGTAAAAGGCAGGAACCAGGAGCGCCTGGCCGAATGCTATTATATGCTAGAA
GATTATGAGGGGTTAGAGACTCTTGCCAATTCACTTCCAGAAAACCATAAGTTGCTTCCAGAAATAGCCC
AGATGTTTGTGAGAGTTGGAATGTGTGAGCAAGCTGTGAGCGCATTCTTGAAGTGTAACCAACCAAAGGC
AGCGGTGGACACCTGTGTACACCTGAACCAATGGAACAAAGCCGTCGAACTGGCTAAAAGTCATAGTATG
AAGGAGATTGGATCTCTGTTAGCTAGGTACGCGTCCCATTTACTGGAGAAGAACAAGACTCTCGATGCCA
TTGAACTCTATAGGAAAGCCAGCTACTTTTTTGATGCAGCTAAACTGATGTATAAGATTGCAGATGAAGA
GGCGAAGAAAAGGACCAAGCCCCTGCGTGTGAAGAAACTCTACGTGCTGTCGGCTCTGCTCATCGAGCAG
TATCACGAGCAGATGAAAAACGCCCAGCGCGGCAAAGTTAAAGGCAAGAACTCAGAGGCCACTTCTGCTT
TGGCTGGCTTGCTAGAAGAGGAGGTTCTCTCTACAACTAGTCGGTTCACAGATAACGCCTGGAGAGGAGC
GGAGGCCTACCATTTCTTTATACTCGCGCAGCGGCAGCTCTACGAGGGCTACGTTGACACTGCATTGAAG
ACAGCTCTTCACCTGAGAGACTATGAAGACATCATTCCCTCAGTTGAGATCTACTCTCTGTTAGCACTCT
GTGCGTGTGCAAGCAGAGCTTTTGGTACCTGTTCAAAAGCTTTTATTAAACTGGAATCTTTAGAGACGCT
CAGTGCAGAGCAGAAGCAGCAATATGAAGACCTGGCTCTGGAAATCTTCACCAAACACACGCCAAAAGAC
AACAGGAAGTCTGAATTAAACAGCCTTCTTGAAGGCGGGGAAGGCAAACTGCCGACCTGTATCGCCACTG
GCAGCCCAATCATCGAGTATCAGTTCTGGGTGTGCAAAGTCTGCAAGCACTACGTCCTCGCCCAGGAGAT
CAGCAACTACAACTTTTGCCCTTTATGCCACAGCTCGGTAGAATAA

Translation (1181 aa):
MFFYLSKKIAVPNNVKLKCISWNKDQGFIACGGEDGLLKVLRLETQTDDSKLRGLAAPSNLSMNQNLEGH
SGAVQVVTWNEQYQKLTTSDQNGLIIVWMLYKGSWYEEMINNRNKSVVRSMSWNADGQKICIVYEDGAVI
VGSVDGNRIWGKDLKGIQLCHVTWSADSKILLFGMANGEIHIYDNQGNFIMKMKLNCLVNVTGAISIAGI
HWYHGTEGYVEPDCPCLAICFDNGRCQIMRHENDQNPVLIDTGMYVVGIQWNHIGSVLAVAGSQKVVTQD
KDINIVQFYTPFGEHLGTLKVPGKQMCSLSWEGGGLKIALAVDSFIYFANIRPDYKWGYCSNTVVYAYTR
PDRPEYCVVFWDTKNSEKYVKYVKSLISITTCGDFCILATKADENHPQEENEMETFGATFVLVLCNSIGT
PLDPKYIDLVPLFVAMTKTHVIAASKEAFYTWQYRVAKKLTALEINQITRSRKEGRERIYHVDDVPSGSV
DGVFDYSKAIQGTRDPICAITASDKTLIVGRESGVIQRYSFPNVALIQKYSLDCRACQLSLNCNSSRLAI
IDIAGVLTFFDLDTRVTDSTGQQVVGELLKLERKDVWDMKWAKDNPDLFAMMEKTRMYVFRNLDPEEPIQ
TSGYICNFEDLEIKSVLLDEILKDPEHPSKDYIMNFEIRSLRDSRALIEKVGIEDASQFIEDNPHPRLWR
LLAEAALQKLDLYTAQQAFVRCKDYQGIKFVKLLGNLQSESMKQAEVIAYFGRFEDAERMYQDMDRRDLA
IGLRMKLGDWFRVLQLLKTGSGDADDSLLEQANNAIGEYFADRQKWQNAVQYYVKGRNQERLAECYYMLE
DYEGLETLANSLPENHKLLPEIAQMFVRVGMCEQAVSAFLKCNQPKAAVDTCVHLNQWNKAVELAKSHSM
KEIGSLLARYASHLLEKNKTLDAIELYRKASYFFDAAKLMYKIADEEAKKRTKPLRVKKLYVLSALLIEQ
YHEQMKNAQRGKVKGKNSEATSALAGLLEEEVLSTTSRFTDNAWRGAEAYHFFILAQRQLYEGYVDTALK
TALHLRDYEDIIPSVEIYSLLALCACASRAFGTCSKAFIKLESLETLSAEQKQQYEDLALEIFTKHTPKD
NRKSELNSLLEGGEGKLPTCIATGSPIIEYQFWVCKVCKHYVLAQEISNYNFCPLCHSSVE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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