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Report for CCDS26022.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26022.1 Public Mus musculus 12 Adam21 23 108 98 CCDS HistoryNCBI Gene:56622Re-query CCDS DB by CCDS ID:26022.1Re-query CCDS DB by GeneID:56622See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26022.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000008582.3 ENSMUSP00000008582.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000008582.3Link to Ensembl Protein Viewer:ENSMUSP00000008582.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000008582Re-query CCDS DB by Protein ID:ENSMUSP00000008582
Original member Current member NCBI NM_020330.5 NP_065063.1 Accepted alive Link to Nucleotide Sequence:NM_020330.5Link to Protein Sequence:NP_065063.1Re-query CCDS DB by Nucleotide ID:NM_020330Re-query CCDS DB by Protein ID:NP_065063Link to BLAST:NP_065063.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065063.1 729 Q9JI76 729 100% 0 0

Chromosomal Locations for CCDS 26022.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 81558797 81560986 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2190 nt):
ATGGAGTGCTTCATAATGTTAGGTGCAGATGCTAGAACACTCATGAGAGTCACTCTTTTGCTGCTCTGGC
TTAAGGCACTTCCATCCCTTATTGACCTCTCACAGACTGGGTCCACTCAATACCTCAGTTCTCCAGAAGT
AGTTATCCCTCTGAAGGTGACCAGCAGGGCCAGGGGTGCAAAGAATTCAGAGTGGCTCTCCTATAGCCTT
GTATTTGGTGGCCGTAGACATGTTGTCCATATGCGAGTCAAGAAGCTGTTGGTTTCTACTCACATCCCTG
TACTCACCTACACAGAGGAACACACCCCCCTCAGCGATTACCCCTTTGTCCCTAGTGACTGTTACTATCA
TGGTTATGTAGAGGGAGCCCTTGAGTCTTTAGTTGCTTTCAGTGCCTGCAATGGGGGGTTGCAGGGAGTG
TTACAAATGAATGGCTTCTCTTATGAAATTGAACCTATCAAGCACTCTAGCACATTCGAGCACCTAGTCT
ATACATTAAATAATAACAAGACACAATTTCCACCTATGCTATGTAGTTTAACGGAGAAGAGACTACTGTA
CCAACCCTTTGGAGTTGAAGAGGCTAAGAAGTCAGCTATGAAGCAAAATTATGGAAAACTGTGGCCCCAC
ATGTGGTTTCTGGAGCTGGCTGTAGTGGTAGACTATGGTTTCTTCACTAACGCTCAACAAAACTTGTCAA
AGGTACGAGGAGATGTGGTTCTTGTTGTTAACATGGTAGATTCCATGTACAAGCCGCTGGATACTTATGT
GACTTTGGTTGGCATCGAGATTTGGAATCGAGGAAATGTTCTCCCAATGGAAAACATACATCAGGTCTTA
GAAGATTTTTCTCATTGGAAACAAATCAGTCTTTCTCAGGTACATCATGATGCAGCCCATATCTTCATTA
GAAGCTCACTTATAAGTGTACTTGGTATAGCCTACATTGCAGGAATATGTCGTCCTCCTCTTGATTGTGG
AGTTGAAAATTTCCAAGGGGACGCCTGGTCTCTTTTTGCCAACACGGTGGCCCATGAGTTAGGCCATACT
TTTGGTATGAAGCATGATGAGGAATCCTGCTCTTGTGGGAAAAGTGGTTGTGTCATGAGTACTTTCAGAG
TGCCAGCAGAGAGATTCACCAATTGCAGCTATAGTGATTTTATGAAGACCACTTTAAACCAAGGAACTTG
TCTGTACAATCATCCAAGACCAGGGGCAGGTTTCCTGGTGAAGCGCTGTGGGAATGGTATGGTTGAAAGT
GAAGAAGAGTGTGACTGTGGATCTGTACAGGAATGTGAGCAAGATCCCTGTTGTTTTCTTAACTGTACGC
TGAGACCTGCAGCTGCTTGTAGTTTTGGGCTCTGTTGCAAAGACTGCAAATTCATGCTCTTGGGGGAACT
CTGTAGACCAAAGATCAATGAATGTGACCTTCCAGAATGGTGCAATGGAACATCTCACCAGTGCCCAGAA
GATGGATATGTACAGGATGGGGTCCCCTGTGGTGCCGGTGCCTACTGCTATCAAAAGCAGTGTAATAACC
ATGACCAACAGTGCAGGGAGATTTTTGGCAAAGGTGCAAGAAGCGCATCTCATAATTGCTATAAAGAAAT
CAACTTACAAGGAAACAGGTTTGGCCATTGTGGCACAGATGGCACAGTATTCCTAAAATGCAGAATGTCA
GATGTGTTTTGTGGGAAAGTCCACTGTGAAAATGTAGAAGACATTCACCATCCCCAGGCTCCTTATGTTT
TGCAGAACATTTATGCCAATGGTATCACCTGCTGGAGTACTGGCCATTGTTTGGGGATGGGTGTGCCTGA
TGTTGGTGAAGTGAAAGATGGCACCACCTGTGGAGTAGGAAAGATCTGCCTACACAAGAAGTGTGTCAGT
CTGTCTGTCCTTTCAAATGCTTGCCTTCCTGAGACTTGTAATAGGAAGGGGGTCTGTAATAACAAGCATC
ACTGTCACTGTGACTATGGGTGGTCCCCGCCTTTCTGCCTGCACAGAGGTTATGGAGGTAGTATTGACAG
TGGTCCAACATCTCAAAAAAGAAGAGTCATTATCACTGTCCTGTCAATAACTGTGCCTGTTTTATCCATC
CTAATTTGTCTGCTCATAGCTGGGCTTTATAGAATATATTGTAAAATACCTTCTGGTCCCAAAGAGACTA
AGGCCTCTTCACCAGGTTAG

Translation (729 aa):
MECFIMLGADARTLMRVTLLLLWLKALPSLIDLSQTGSTQYLSSPEVVIPLKVTSRARGAKNSEWLSYSL
VFGGRRHVVHMRVKKLLVSTHIPVLTYTEEHTPLSDYPFVPSDCYYHGYVEGALESLVAFSACNGGLQGV
LQMNGFSYEIEPIKHSSTFEHLVYTLNNNKTQFPPMLCSLTEKRLLYQPFGVEEAKKSAMKQNYGKLWPH
MWFLELAVVVDYGFFTNAQQNLSKVRGDVVLVVNMVDSMYKPLDTYVTLVGIEIWNRGNVLPMENIHQVL
EDFSHWKQISLSQVHHDAAHIFIRSSLISVLGIAYIAGICRPPLDCGVENFQGDAWSLFANTVAHELGHT
FGMKHDEESCSCGKSGCVMSTFRVPAERFTNCSYSDFMKTTLNQGTCLYNHPRPGAGFLVKRCGNGMVES
EEECDCGSVQECEQDPCCFLNCTLRPAAACSFGLCCKDCKFMLLGELCRPKINECDLPEWCNGTSHQCPE
DGYVQDGVPCGAGAYCYQKQCNNHDQQCREIFGKGARSASHNCYKEINLQGNRFGHCGTDGTVFLKCRMS
DVFCGKVHCENVEDIHHPQAPYVLQNIYANGITCWSTGHCLGMGVPDVGEVKDGTTCGVGKICLHKKCVS
LSVLSNACLPETCNRKGVCNNKHHCHCDYGWSPPFCLHRGYGGSIDSGPTSQKRRVIITVLSITVPVLSI
LICLLIAGLYRIYCKIPSGPKETKASSPG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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