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Report for CCDS26124.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26124.1 Public Mus musculus 12 Ubr7 23 108 98 CCDS HistoryNCBI Gene:66622Re-query CCDS DB by CCDS ID:26124.1Re-query CCDS DB by GeneID:66622See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 26124.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000046404.7 ENSMUSP00000041247.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000046404.7Link to Ensembl Protein Viewer:ENSMUSP00000041247.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000046404Re-query CCDS DB by Protein ID:ENSMUSP00000041247
Original member Current member NCBI NM_025666.2 NP_079942.1 Accepted alive Link to Nucleotide Sequence:NM_025666.2Link to Protein Sequence:NP_079942.1Re-query CCDS DB by Nucleotide ID:NM_025666Re-query CCDS DB by Protein ID:NP_079942Link to BLAST:NP_079942.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079942.1 425 Q8BU04 425 100% 0 0

Chromosomal Locations for CCDS 26124.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 102758029 102758178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 102761371 102761504 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 102761921 102761981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 102763458 102763553 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 102765808 102765861 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 102766246 102766351 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 102768070 102768278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 102769094 102769243 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 102769781 102769943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 102771219 102771280 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 102775694 102775786 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1278 nt):
ATGGCCGGAGCCGAGAGCCCCACCGAGTGCCAGGCGGAGCTGGAGCCCGTGGTGTCGCTGGTGGACGTGC
TCGAGGAAGACGAGGAGTTGGAGAATGAGGCGTGCGCCGTCCTGGGCGGCAGCGACTCGGAGAAGTGCTC
CTACTCGCAGGGCTCAGTGGGGAGACAAGCACTGTACGCCTGCAGCACCTGCACGCCAGAGGGAGAAGAG
CCCGCAGGGATTTGTCTAGCTTGCAGTTACGAATGTCATGGAAGCCATAAACTGTTTGAACTATACACAA
AAAGAAATTTTCGTTGTGATTGTGGAAACAGCAAGTTTAAAAACTTGGAATGCAAATTATTTCCTGACAA
ATCAAAGGTAAATTCTTGCAATAAGTACAATGACAACTTTTTTGGATTATACTGCGTTTGTAAGAGACCT
TATCCTGATCCTGAAGATGAGGTTCCAGATGAGATGATACAGTGTGTGGTCTGTGAAGACTGGTTCCATG
GCAGGCATCTTGGTGCCATTCCCCCTGAGAGTGGGGATTTCCAGGAGATGGTGTGCCAGGCTTGTATGAG
GCGCTGTTCTTTCTTGTGGGCTTATGCTGCCCAGTTGGCAGTCACCAGGATATCTGCTGAAGATGATGGG
CTGCTGCCAAATGCTACTGGCATGGGAGATGAAGATGTTAGCAAGCCTGAAAATGGAGCTCCCCAAGATA
ATGGCCTGAAAGAGGATGCTCCCGAGCATGGCAGGGATTCTGTCAACGAGGTGAAAGCTGAGCAGAAGAA
CGAGCCCTGCAGCAGCTCTAGTTCTGAGTCTGACCTCCAGACAGTGTTTAAGAAAGAAAATATCAAAACT
GAGCCACAGTCCAGCTGCAGACTTCAGGAACTCCAAGCCAAGCAGTTTGTAAAGAAAGATGCTGCCACCT
ATTGGCCCTTGAACTGGCGCAGCAAACTATGCACCTGTCAAGACTGTATGAAAATGTATGGAGAACTAGA
CGTCCTGTTCCTGACAGATGAATGTGATACAGTTCTGGCTTATGAGAACAAAGGCAAGAACGACCAGGCA
ACTGATAGAAGGGACCCTTTAATGGACACCCTTAGCAGCATGAATAGAGTCCAGCAAGTGGAGCTCATCT
GTGAATACAATGACTTGAAGACTGAACTTAAGGACTACCTGAAGAGATTTGCTGATGAAGGCACGGTTGT
TAAGAGAGAAGACATTCAGCAGTTCTTTGAAGAGTTTCAATCAAAAAAGAGAAGGCGAGTGGACGGGTTA
CAGTATTACTGCAGCTAA

Translation (425 aa):
MAGAESPTECQAELEPVVSLVDVLEEDEELENEACAVLGGSDSEKCSYSQGSVGRQALYACSTCTPEGEE
PAGICLACSYECHGSHKLFELYTKRNFRCDCGNSKFKNLECKLFPDKSKVNSCNKYNDNFFGLYCVCKRP
YPDPEDEVPDEMIQCVVCEDWFHGRHLGAIPPESGDFQEMVCQACMRRCSFLWAYAAQLAVTRISAEDDG
LLPNATGMGDEDVSKPENGAPQDNGLKEDAPEHGRDSVNEVKAEQKNEPCSSSSSESDLQTVFKKENIKT
EPQSSCRLQELQAKQFVKKDAATYWPLNWRSKLCTCQDCMKMYGELDVLFLTDECDTVLAYENKGKNDQA
TDRRDPLMDTLSSMNRVQQVELICEYNDLKTELKDYLKRFADEGTVVKREDIQQFFEEFQSKKRRRVDGL
QYYCS


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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