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Report for CCDS26173.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26173.1 Public Mus musculus 12 Wdr20 23 108 98 CCDS HistoryNCBI Gene:69641Re-query CCDS DB by CCDS ID:26173.1Re-query CCDS DB by GeneID:69641See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26173.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000095410.7 ENSMUSP00000093059.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000095410.7Link to Ensembl Protein Viewer:ENSMUSP00000093059.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000095410Re-query CCDS DB by Protein ID:ENSMUSP00000093059
Original member Current member NCBI NM_027149.4 NP_081425.2 Accepted alive Link to Nucleotide Sequence:NM_027149.4Link to Protein Sequence:NP_081425.2Re-query CCDS DB by Nucleotide ID:NM_027149Re-query CCDS DB by Protein ID:NP_081425Link to BLAST:NP_081425.2

Chromosomal Locations for CCDS 26173.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 110738029 110738277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 110779296 110779478 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 110793114 110794391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1710 nt):
ATGGCGACGGAGGGAGGAGGGAAGGAGATGAACGAGATTAAGACCCAATTCACCACCCGGGAAGGTCTGT
ACAAGCTGCTGCAGCACTCGGAGTACAGCCGGCCCAACCGGGTGCCCTTCAACTCGCAGGGATCCAACCC
TGTCCGCGTCTCCTTCGTAAACCTCAACGACCAGTCTGGCAACGGCGACCGCCTCTGCTTCAATGTGGGC
CGGGAGCTCTACTTCTATATCTACAAGGGGGTCCGCAAGGCTGCCGACCTGAGTAAACCCATAGATAAGA
GGATATACAAAGGGACGCAGCCCACTTGCCATGACTTCAACCTCCTCACAGCTACAGCAGAGAGCGTCTC
TCTCCTAGTGGGCTTTTCCGCAGGCCAAGTCCAGCTTATAGACCCAATCAAGAAAGAGACCAGCAAGCTG
TTTAATGAGGAAAGACTAATAGACAAGTCCCGCGTAACCTGTGTCAAATGGGTTCCTGGTTCGGAAAGCC
TTTTCCTAGTAGCCCATTCAAGTGGGAACATGTACTTATATAATGTGGAGCACACTTGTGGCACCACAGC
CCCCCACTACCAGCTCCTGAAGCAGGGAGAAAGCTTTGCCGTGCACACTTGCAAGAGCAAATCCACGAGG
AACCCTCTCCTTAAGTGGACGGTGGGCGAGGGGGCCCTCAACGAGTTTGCTTTCTCCCCAGATGGCAAGT
TCTTAGCGTGTGTGAGCCAGGACGGGTTTCTGCGTGTGTTCAACTTTGACTCAGTGGAGCTGCACGGTAC
AATGAAAAGCTACTTTGGGGGCTTGCTTTGTGTGTGCTGGAGCCCAGATGGCAAGTACATTGTGACAGGT
GGAGAGGACGACTTGGTGACAGTCTGGTCCTTTCTAGACTGCCGAGTAATAGCTAGAGGCCATGGGCACA
AATCCTGGGTCAGTGTTGTAGCATTTGATCCCTATACTACTAGTGTAGAAGAAAGTGACCCTATGGAGTT
TAGTGGCAGTGACGAGGACTTCCAGGACCTTCTTCATTTTGGCAGAGATCGAGCGAACAGTACACAGTCT
AGGCTATCCAAACGGAACTCTACAGACAGTCGCCCTGTAAGTGTTACGTATCGGTTTGGTTCGGTGGGCC
AGGATACACAGCTGTGTTTATGGGACCTTACAGAAGACATCCTTTTCCCTCACCAGCCCCTCTCAAGAGC
AAGGACACATACAAACGTTATGAATGCCACAAGTCCGCCTGCCGGAAGCAATGGGAACAGTGTCACTACA
CCTGGGAACTCTGTGCCCCCTCCATTGCCACGGTCCAATAGCCTTCCACATTCAGCAGTCTCCAATGCTG
CTAGCAAAGGCAGCGTCATGGACGGGGCCATTGCCTCCGGGGTCAGCAAGTTTGCAACTCTGTCGCTACA
TGACCGGAAGGAGAGACACCACGAGAAAGACCATAAACGAAACCATAGTATGGGACACATTTCCAGCAAG
AGCAGTGATAAACTGAACCTAGTTACTAAAGCCAAAACGGACCCAGCTAAAACTCTGGGGACATCCCTGT
GTCCTCGGATGGAAGATGTTCCCTTGTTAGAGCCACTGATCTGTAAAAAGATAGCTCATGAAAGACTGAC
GGTATTGGTTTTTCTTGAAGACTGTATAGTCACTGCTTGTCAGGAGGGATTTATTTGCACATGGGCAAGG
CCCGGTAAAGTGGTAAGTTTTAATCCTTAA

Translation (569 aa):
MATEGGGKEMNEIKTQFTTREGLYKLLQHSEYSRPNRVPFNSQGSNPVRVSFVNLNDQSGNGDRLCFNVG
RELYFYIYKGVRKAADLSKPIDKRIYKGTQPTCHDFNLLTATAESVSLLVGFSAGQVQLIDPIKKETSKL
FNEERLIDKSRVTCVKWVPGSESLFLVAHSSGNMYLYNVEHTCGTTAPHYQLLKQGESFAVHTCKSKSTR
NPLLKWTVGEGALNEFAFSPDGKFLACVSQDGFLRVFNFDSVELHGTMKSYFGGLLCVCWSPDGKYIVTG
GEDDLVTVWSFLDCRVIARGHGHKSWVSVVAFDPYTTSVEESDPMEFSGSDEDFQDLLHFGRDRANSTQS
RLSKRNSTDSRPVSVTYRFGSVGQDTQLCLWDLTEDILFPHQPLSRARTHTNVMNATSPPAGSNGNSVTT
PGNSVPPPLPRSNSLPHSAVSNAASKGSVMDGAIASGVSKFATLSLHDRKERHHEKDHKRNHSMGHISSK
SSDKLNLVTKAKTDPAKTLGTSLCPRMEDVPLLEPLICKKIAHERLTVLVFLEDCIVTACQEGFICTWAR
PGKVVSFNP


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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