NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS26212.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26212.1 Public Mus musculus 12 Ncapg2 23 108 98 CCDS HistoryNCBI Gene:76044Re-query CCDS DB by CCDS ID:26212.1Re-query CCDS DB by GeneID:76044See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26212.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000084828.4 ENSMUSP00000081889.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000084828.4Link to Ensembl Protein Viewer:ENSMUSP00000081889.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000084828Re-query CCDS DB by Protein ID:ENSMUSP00000081889
Original member Current member NCBI NM_133762.4 NP_598523.3 Accepted alive Link to Nucleotide Sequence:NM_133762.4Link to Protein Sequence:NP_598523.3Re-query CCDS DB by Nucleotide ID:NM_133762Re-query CCDS DB by Protein ID:NP_598523Link to BLAST:NP_598523.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_598523.3 1138 Q6DFV1 1138 100% 0 0

Chromosomal Locations for CCDS 26212.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 116407233 116407310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 116412375 116412563 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 116413061 116413175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 116414738 116414892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 116415425 116415559 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 116419223 116419317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 116420688 116420757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 116423196 116423282 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 116424622 116424714 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 116425779 116425904 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 116426576 116426755 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 116427656 116427808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 116429654 116429876 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 116430095 116430198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 116434584 116434757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 116437971 116438041 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 116438598 116438748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 116438865 116439038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 116439759 116439875 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 116439960 116440100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 116440542 116440641 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 116442937 116443124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 116444301 116444441 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 116447657 116447760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 116450376 116450476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 116452267 116452366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 116460564 116460615 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3417 nt):
ATGGAAAAACGTGAGGCGTTCATCCAAGCAGTATCTAAGGAGTTGGTTGAAGAGTTTCTGCAGTTTCTTC
AACTTGATAAAGATTCTTCTAATCCTTTCAGCTTAAGTGAACTACTAGATGAATTATCAAGGAAACAGAA
AGAAGAATTATGGCAAAGACTGAAGGACTTACTAACAGAAACATTGTTGGAAAGCCCTGTGGATAGGTGG
CAGACAGTGGAAGTCGAGGGTGCAGACGATATGGAATCAGAGCACAGTCCAAAGATGAGAAAGAGCATAA
AAATAATATGTGCAATTGTGACTGTAATTCTTGCTTCTGTATCTATAATAAATGAACATGAGAACTATGG
AGCCCTCCTGGAGTGTGCTGTTATATTGAACGGTATTTTATATGCATTACCTGAATCTGAACAAAAACTC
CAGAACTCTATTCAGGATCTGTGTGTCAAATGGTGGGAAAGGGGCCTTCCTGCCAAGGAGGACATGGGAA
AGACTGCATTTATCATGCTGCTGAGGAGGAGTCTGGAGACCAAATCGGGGGCAGATGTGTGTCGGCTGTG
GCGCATCCATCAGGCTTTGTATTGCTTTGATTATGATTGGGAGGAAAGTAGAGAAATTAAAGATATGCTA
CTTGAGTGCTTCATAAATGTTAATTACATCAAGAAGGAAGAGGGAAGAAGATTTCTTAGTTTTCTCTTTA
GTTGGAATGTAGACTTTATTAAAATGATCCATGAGACCATTAAAAACCAGTTAGCTGGATTACAAAAGTC
TTTGATGGTACACATTGCAGAAATTTATTTCAGAGCTTGGAAAAAGGCTTCGGGGAAAATGTTGGAGACC
ATTGAATATGACTGCATCCAGGACTTCATGTTCCATGGCATCCACCTTCTAAGGAGGTCTCCAGTGCACT
CCAAAGTCCGAGAGGTGCTGAGTTACTTTCACCAACAGAAAGTCCGTCAGGGAGTGGAAGAGATGCTGTA
TAGGTTATATAAGCCCATCCTGTGGAGGGGACTAAAGGCCAGAAATTCTGAAGTTCGATCAAATGCTGCA
TTGTTGTTTGTTGAAGCATTTCCTATTAGAGATCCAAACTTCACTGCTACTGAAATGGACAATGAAATCC
AGAAGCAGTTTGAAGAACTGTATAACCTTATAGAAGATCCTTATCCACGGGTTCGTTCCACAGGCATCCT
TGGTGTTTGTAAAATATCTTCTAAATATTGGGAAATGATGCCCCCTAACATTCTTGTTGACTTCTTGAAG
AAAGTCACAGGGGAGCTGGCATTTGATATAAGCTCAGCCGATGTTCGGTGTTCTGTTTTTAAGTGTTTGC
CAATTATTTTGGATAACAAGCTGAGCCACCCATTATTAGAACAGCTTTTGCCAACACTCAGGTATAGTCT
CCACGATAACTCAGAGAAAGTGCGGGTGGCTTTTGTGGATTTGCTGCTGAAGATCAAGGCTGTGAGAGCT
GCAAAGTTTTGGAAAATATGCCCCATGGAGGACATTTTGGTTCGTCTGGAAATGGATTCTCGGCCTGTAT
CTCGACGCCTGGTGAGCCTCATCTTCAACTCTTTTCTGCCCGTGAACCAGCCGGAGGAGGTGTGGTGTGA
GCGCTGTGTCACGCTGATCCAGATGAATCGCGCAGCTGCCAGGAGGTTCTATCAGTATGCCCATGAGCAT
ACCGCCAGCACCAACATAGCAAAGCTCATCCATGTCATCCGCCACTGCTTGAACGCCTGTATCCAGAGGA
CCCTGAGAGAGGGCTCAGAGGCCCATAAGGAATGCGAGAAGGAGAATGCCAGTGTACTAGATAAAACATT
GTCAGTGAACGACACTGCGTCCATGGCAGGCTTACTAGAAATCATTGTGATCCTCTGGAAGAACATCCAT
AGAAGCCTGGAAAATAATAAAGAGGCTAAAATTTATACCATTAACAAGTTTGCAGCTGTGCTTCCAGAGT
ACCTGAAGGTATTCAAGGATGAGCGCTGCAAGATCCCTTTGTTCATGCTAATGTCCTTCTTGCCAGCCTC
TGCTGTCCCTGTATTCAGCTGTGGTGTGATTTCTGTTCTGAGAAATCAGGAGAGTGTTACAGGCAGGAGC
TACTGTACCTTGCTCGATTGTCTCTGTTCCTGGGGGCAAGTGGGGCATGTCCTGGAGCTCATTGTGGACT
GGCTGCCTACAGTGCCACCTCAAGCCAAGAGTAACTTGGCCTCTAAACGGAAAGTGGAAATCAATGACAC
GTGCTCAGTGAAACCTGAGTTAGCATTGTTGTACATGGAGTATTTGCTGACCCATCCCAAGAATCGAGAG
TGTCTCCTCTCTGTACCCCAGAAGAAACTGAACCAGCTTTTAAAAGCACTCGAGGGATCCAAGGCAGAAC
TGGAATCATTTCTTCAGTCTCCAAGTGGGAATCCTCTCAACTTCAACAAAGCAACTGCCCTGCATGCCTT
TGGTCTGTACTGTAGGATGAGTGTCCATCTTCAGTACAAGTTCTGCTCAGAAGAGAAAATTCATCTGTCC
ATCTTGGATGACACTGGGTCTTGGTTAGAAAACAAAGTTTTACCTCTTCTTGAAGACCAAGAAGAGGAGT
ATCTGAAGCTTCGGAAGGATGTTTATCAACAGATAATCCAGACTTACCTGGCTGTGTGTAAAGATGTTGT
TATGGTGGGACTTGGAGATCCTAAATTTCAAATGCAACTTTTACAGCGGAGTTTTGGAATAATGAAAACA
GTGAAGGGTTTTTTTTATGTTTCATTACTTCTTGGCATTCTGAAGGAGATAGCTGGAAACACCATAATTC
ACAAAACAGATTCAGATGAAAAAGTCACAGTGCTGTTTGACTTAGTCCAGGAAGTGTTTCAGAAGATGTT
GGAATGTATTGCCTGTATCTTCAGGAAGCAACCTGAAGAAAGTCTTCCGCTCTTTCATTCTGTTCAGACC
CCTCTTCATGAATTCATCACCACCATCCAGTCCTGGCACAAGGACACTGCAGTGCACCATGCTGTGCTTT
CTACGTTGATTGCTGCACCTGTGGTTGAGATAAGTCACCAGCTGCAGAAGGTTTCTGATATAGAAGAGCT
GACCTCACCACAATGCCTTCATGACCTTCCTCCATTTTCAAGGTGTTTAGTGGGAGTGATCATGAAGTCT
TCGGATGTGGTCAGGTCATTTGTGGATGAACTGAAGGCATGTGTAACTTCTGGTGATGTTGAAGGCATTG
TGTGCCTCACAGCTGTTCTGCATATTATTTTGGTTATTAACAAAGGTAAACATATAAGTGCAAAGGTGAA
GGAAGTTGCAACAGCTGTGTACAGAAAGCTGAAGACCTTTATGGAGATCACTTTGGAAGAGGATAGCCTT
GAAAGATTCCTATATGAGTCATCAATGAGAACTTTGGGAGAATTTCTGAATCCATGA

Translation (1138 aa):
MEKREAFIQAVSKELVEEFLQFLQLDKDSSNPFSLSELLDELSRKQKEELWQRLKDLLTETLLESPVDRW
QTVEVEGADDMESEHSPKMRKSIKIICAIVTVILASVSIINEHENYGALLECAVILNGILYALPESEQKL
QNSIQDLCVKWWERGLPAKEDMGKTAFIMLLRRSLETKSGADVCRLWRIHQALYCFDYDWEESREIKDML
LECFINVNYIKKEEGRRFLSFLFSWNVDFIKMIHETIKNQLAGLQKSLMVHIAEIYFRAWKKASGKMLET
IEYDCIQDFMFHGIHLLRRSPVHSKVREVLSYFHQQKVRQGVEEMLYRLYKPILWRGLKARNSEVRSNAA
LLFVEAFPIRDPNFTATEMDNEIQKQFEELYNLIEDPYPRVRSTGILGVCKISSKYWEMMPPNILVDFLK
KVTGELAFDISSADVRCSVFKCLPIILDNKLSHPLLEQLLPTLRYSLHDNSEKVRVAFVDLLLKIKAVRA
AKFWKICPMEDILVRLEMDSRPVSRRLVSLIFNSFLPVNQPEEVWCERCVTLIQMNRAAARRFYQYAHEH
TASTNIAKLIHVIRHCLNACIQRTLREGSEAHKECEKENASVLDKTLSVNDTASMAGLLEIIVILWKNIH
RSLENNKEAKIYTINKFAAVLPEYLKVFKDERCKIPLFMLMSFLPASAVPVFSCGVISVLRNQESVTGRS
YCTLLDCLCSWGQVGHVLELIVDWLPTVPPQAKSNLASKRKVEINDTCSVKPELALLYMEYLLTHPKNRE
CLLSVPQKKLNQLLKALEGSKAELESFLQSPSGNPLNFNKATALHAFGLYCRMSVHLQYKFCSEEKIHLS
ILDDTGSWLENKVLPLLEDQEEEYLKLRKDVYQQIIQTYLAVCKDVVMVGLGDPKFQMQLLQRSFGIMKT
VKGFFYVSLLLGILKEIAGNTIIHKTDSDEKVTVLFDLVQEVFQKMLECIACIFRKQPEESLPLFHSVQT
PLHEFITTIQSWHKDTAVHHAVLSTLIAAPVVEISHQLQKVSDIEELTSPQCLHDLPPFSRCLVGVIMKS
SDVVRSFVDELKACVTSGDVEGIVCLTAVLHIILVINKGKHISAKVKEVATAVYRKLKTFMEITLEEDSL
ERFLYESSMRTLGEFLNP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH