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Report for CCDS26856.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26856.1 Public Mus musculus 14 Camk2g 23 108 98 CCDS HistoryNCBI Gene:12325Re-query CCDS DB by CCDS ID:26856.1Re-query CCDS DB by GeneID:12325See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26856.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000100837.10 ENSMUSP00000098398.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000100837.10Link to Ensembl Protein Viewer:ENSMUSP00000098398.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000100837Re-query CCDS DB by Protein ID:ENSMUSP00000098398
Original member NCBI NM_001039139.2 NP_001034228.1 Updated not alive Link to Nucleotide Sequence:NM_001039139.2Link to Protein Sequence:NP_001034228.1Re-query CCDS DB by Nucleotide ID:NM_001039139Re-query CCDS DB by Protein ID:NP_001034228
Current member NCBI NM_001039139.3 NP_001034228.1 Accepted alive Link to Nucleotide Sequence:NM_001039139.3Link to Protein Sequence:NP_001034228.1Re-query CCDS DB by Nucleotide ID:NM_001039139Re-query CCDS DB by Protein ID:NP_001034228Link to BLAST:NP_001034228.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001034228.1 495 Q923T9-3 495 100% 0 0

Chromosomal Locations for CCDS 26856.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 20737271 20737503 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20738849 20738943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20739327 20739402 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20742705 20742753 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20744604 20744648 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20755659 20755702 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20760144 20760186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20760397 20760480 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20764146 20764268 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20764861 20764955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20765396 20765479 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20765912 20766014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20766153 20766225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20770064 20770129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20771007 20771061 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20779204 20779263 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20792519 20792613 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20793901 20793965 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1488 nt):
ATGGCCACCACCGCCACCTGCACCCGCTTCACCGACGACTACCAGCTTTTCGAGGAGCTCGGCAAGGGTG
CCTTCTCAGTGGTCCGGAGGTGTGTAAAGAAAACATCTACGCAGGAATATGCTGCAAAAATCATCAATAC
CAAGAAGTTGTCCGCCCGAGATCATCAGAAACTAGAACGAGAGGCCCGGATATGCCGACTTCTGAAACAT
CCAAACATTGTGCGTCTCCATGACAGTATTTCTGAAGAAGGGTTTCACTACCTCGTGTTTGACCTTGTTA
CCGGAGGGGAGTTGTTTGAAGACATTGTGGCCAGAGAGTACTACAGTGAAGCTGATGCCAGCCACTGTAT
ACATCAGATCCTGGAGAGTGTTAACCACATCCACCAGCATGACATCGTCCACCGGGATCTGAAGCCTGAG
AACTTGCTGCTGGCGAGTAAATGCAAGGGTGCTGCGGTCAAGCTAGCTGATTTTGGCCTGGCCATCGAAG
TACAGGGAGAGCAGCAGGCTTGGTTTGGTTTTGCCGGCACCCCAGGTTACTTGTCCCCTGAGGTCTTGAG
GAAAGATCCCTATGGAAAACCTGTGGACATCTGGGCCTGCGGGGTCATCCTGTATATCCTCCTGGTGGGC
TACCCTCCCTTCTGGGATGAGGATCAGCACAAGCTGTATCAGCAGATCAAAGCTGGAGCCTACGATTTCC
CATCACCAGAATGGGACACAGTCACTCCTGAAGCTAAGAACTTGATCAACCAGATGCTGACCATAAACCC
TGCAAAGCGCATCACGGCCGACCAGGCTCTCAAGCACCCATGGGTCTGTCAACGGTCTACGGTGGCATCC
ATGATGCATCGCCAAGAGACGGTAGAGTGCTTACGCAAATTCAACGCCCGGAGAAAACTGAAGGGTGCCA
TCCTCACAACCATGCTTGTCTCCAGGAACTTTTCAGCTGCCAAAAGCCTATTGAACAAGAAGTCAGATGG
CGGTGTCAAGGAACCACAAACCACCGTGGTACATAATGCTACAGATGGGATCAAGGGCTCCACAGAGAGC
TGTAACACCACTACAGAAGACGAAGATCTCAAAGTGAGAAAACAAGAAATCATTAAGATCACAGAACAAC
TGATCGAAGCCATCAACAATGGGGACTTTGAGGCCTACACGAAGATTTGTGACCCGGGCCTCACATCCTT
TGAGCCAGAAGCCCTTGGTAACCTCGTGGAAGGAATGGATTTCCATAAGTTTTACTTTGAGAATCTCCTG
TCCAAGAACAGCAAGCCTATCCACACCACCATCCTAAACCCTCACGTCCACGTGATTGGGGAGGACGCAG
CTTGCATCGCCTATATCCGGCTCACTCAGTACATCGACGGGCAGGGTCGGCCTCGCACCAGTCAGTCAGA
GGAGACCCGGGTGTGGCACCGCCGGGATGGCAAGTGGCTCAATGTCCACTATCACTGCTCAGGGGCCCCT
GCCGCACCGCTACAGTGA

Translation (495 aa):
MATTATCTRFTDDYQLFEELGKGAFSVVRRCVKKTSTQEYAAKIINTKKLSARDHQKLEREARICRLLKH
PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQHDIVHRDLKPE
NLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG
YPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITADQALKHPWVCQRSTVAS
MMHRQETVECLRKFNARRKLKGAILTTMLVSRNFSAAKSLLNKKSDGGVKEPQTTVVHNATDGIKGSTES
CNTTTEDEDLKVRKQEIIKITEQLIEAINNGDFEAYTKICDPGLTSFEPEALGNLVEGMDFHKFYFENLL
SKNSKPIHTTILNPHVHVIGEDAACIAYIRLTQYIDGQGRPRTSQSEETRVWHRRDGKWLNVHYHCSGAP
AAPLQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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