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Report for CCDS26873.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26873.1 Public Mus musculus 14 Zmiz1 23 108 98 CCDS HistoryNCBI Gene:328365Re-query CCDS DB by CCDS ID:26873.1Re-query CCDS DB by GeneID:328365See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26873.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000162645.7 ENSMUSP00000124863.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000162645.7Link to Ensembl Protein Viewer:ENSMUSP00000124863.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000162645Re-query CCDS DB by Protein ID:ENSMUSP00000124863
Original member Current member NCBI NM_183208.4 NP_899031.2 Accepted alive Link to Nucleotide Sequence:NM_183208.4Link to Protein Sequence:NP_899031.2Re-query CCDS DB by Nucleotide ID:NM_183208Re-query CCDS DB by Protein ID:NP_899031Link to BLAST:NP_899031.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_899031.2 1072 Q6P1E1-1 1072 100% 0 0

Chromosomal Locations for CCDS 26873.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 25572069 25572128 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 25576131 25576244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 25581568 25581673 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 25635873 25636017 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 25643558 25643672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 25644656 25644873 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 25645659 25645857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 25646717 25647007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 25649668 25649850 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 25650525 25650605 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 25651219 25651393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 25651847 25651988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 25653323 25653533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 25654499 25654604 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 25655097 25655257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 25656023 25656090 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 25656324 25656392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 25656746 25656990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 25658107 25658273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 25661267 25661521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 25662940 25663047 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3219 nt):
ATGAATTCTATGGACAGGCACATCCAGCAGACCAATGACCGTCTGCAGTGCATCAAGCAGCACTTACAGA
ACCCCGCCAACTTCCACAATGCTGCTACAGAGCTGCTGGATTGGTGTGGAGACCCTCGAGCCTTCCAGAG
GCCCTTTGAGCAGAGCCTCATGGGCTGCCTGACGGTTGTCAGCCGTGTGGCTGCCCAACAAGGGTTTGAC
CTGGACCTGGGCTACAGACTCTTGGCTGTGTGCGCCGCAAATCGAGACAAGTTCACCCCCAAGTCTGCTG
CCCTGCTGTCCTCCTGGTGTGAAGAACTTGGCCGCCTGCTGCTGCTGCGACATCAGAAGAGCCGCCAGAA
CGACCCCCCTGGGAAACTGCCCATGCAGCCCCCCCTCAGCTCCATGAGCTCCATGAAACCCACTCTGTCG
CACAGTGATGGGTCATTTCCTTATGACTCTGTCCCTTGGCAGCAGAACACCAATCAGCCTCCCGGCTCCC
TCTCCGTGGTCACCACGGTGTGGGGAGTGACCAACACATCCCAGAGTCAGGTCCTCGGGAACCCTATGGC
CAATGCCAACAACCCTATGAATCCAGGTGGCAACCCCATGGCATCAGGCATGAGCACCAGCAACCCCGGC
ATCAACTCCCCACAGTTCGCAGGGCAACAGCAACAGTTCTCCACCAAAGCTGGCCCTGCACAGCCCTATA
TCCAGCCCAACATGTACGGCCGACCTGGCTACCCTGGTAGCGGGGGCTTTGGGGCCAGTTACCCTGGGGG
TCCTAGTGCCCCAGCAGGCATGGGCATCCCTCCACATACTCGGCCTCCTGCTGACTTCACCCAGCCAGCG
GCCGCTGCTGCAGCAGCTGCAGTAGCAGCCGCCGCTGCCACAGCCACAGCCACAGCCACAGCTACAGTGG
CAGCCTTGCAAGAGACACAGAACAAGGATATAAACCAGTATGGACCGGTGTGTTCCTCTTTCCAGATGGG
TCCCACCCAGGCGTATAACAGCCAATTCATGAACCAACCCGGGCCTCGGGGGCCTGCCTCCATGGGGGGC
AGCCTGAACCCTGCCGGCATGGCAGCTGGCATGACACCCTCGGGCATGAGCGGCCCTCCCATGGGCATGA
ACCAGCCCCGACCACCCGGCATCAGCCCCTTTGGCACACACGGGCAAAGGATGCCCCAGCAGACCTACCC
AGGCCCCCGGCCCCAGTCCCTTCCTATTCAGAGCATAAAGAGGCCATACCCGGGAGAGCCCAACTATGGA
AACCAGCAATATGGACCAAACAGCCAGTTCCCCACCCAGCCAGGCCAGTACCCTACCCCTAACCCCCCAA
GGCCACTCACATCTCCCAACTACCCTGGACAAAGGATGCCGAGCCAACCCAGCACCGGACAGTACCCACC
CCCCACAGTCAACATGGGGCAGTATTACAAGCCAGAACAGTTTAATGGACAGAACAACACCTTCTCCTCC
GGAAGCAGCTACAGCAGCTACAGCCAAGGGAGCGTCAACAGGCCTCCCAGGCCGGTTCCTGTGGCGAATT
ACCCCCACTCACCTGTTCCAGGGAACCCCACTCCCCCCATGACGCCCGGGAGCAGCATACCTCCCTATCT
GTCCCCCAGCCAAGATGTCAAACCACCTTTCCCACCTGATATCAAGCCAAATATGAGTGCTCTGCCACCA
CCCCCAGCCAACCACAATGACGAGCTACGGCTCACATTCCCCGTGCGGGATGGCGTGGTTCTGGAGCCCT
TCCGCCTGGAGCACAACCTTGCCGTCAGCAACCACGTGTTCCACCTGCGGCCCACGGTTCATCAGACGCT
GATGTGGAGGTCAGACCTGGAGCTGCAGTTCAAGTGCTACCACCATGAAGATCGACAGATGAACACCAAC
TGGCCAGCCTCGGTTCAGGTCAGCGTCAACGCCACACCCCTCACGATCGAGCGGGGAGACAACAAGACCT
CCCACAAGCCCCTGCACCTCAAGCATGTATGCCAGCCTGGCCGGAACACCATCCAGATCACTGTCACCGC
CTGCTGCTGTTCCCACCTCTTTGTGCTGCAGCTGGTACACCGGCCCTCTGTGCGCTCCGTGCTGCAGGGC
CTCCTCAAGAAGCGCCTACTGCCCGCTGAGCACTGCATCACGAAAATCAAGCGGAATTTCAGCAGTGTGG
CTGCCTCCTCGGGCAACACAACTCTCAATGGGGAGGATGGCGTGGAGCAGACCGCCATCAAGGTGTCTCT
GAAGTGCCCCATCACATTCCGGCGCATACAGCTGCCTGCTCGAGGCCACGATTGCAAGCATGTGCAGTGC
TTTGACCTGGAGTCATACCTCCAACTGAATTGTGAGCGAGGGACCTGGAGGTGTCCCGTGTGCAATAAAA
CTGCTCTGCTCGAGGGTCTGGAAGTGGATCAGTACATGTGGGGGATCCTGAACGCCATCCAACACTCCGA
GTTTGAAGAGGTCACCATTGACCCCACGTGCAGCTGGCGGCCAGTACCCATCAAGTCAGACCTCCACATC
AAGGATGACCCCGATGGCATCCCCTCAAAGCGGTTCAAAACCATGAGCCCCAGCCAGATGATCATGCCCA
ATGTCATGGAGATGATCGCCGCTCTGGGCCCTGGCCCGTCTCCCTACCCCCTCCCACCTCCTCCTGGGGG
CACCAGCTCCAACGACTACAGCAGCCAAGGAAACAACTACCAGGGTCATGGCAACTTTGACTTCCCCCAT
GGGAATCCCGGAGGGACATCCATGAACGACTTCATGCACGGTCCCCCCCAGCTCTCGCACCCACCGGACA
TGCCCAACAACATGGCCGCCCTCGAGAAACCCCTCAGTCACCCCATGCAGGAAACTATGCCCCACGCTGG
CAGTTCTGACCAGCCCCATCCCTCCATACAACAAGGTTTGCACGTACCACACCCCAGCAGCCAGGCAGGG
CCTCCATTACATCACAGTGGGGCTCCTCCTCCTTCCCAGCCTCCCCGGCAGCCACCACAGGCCGCTCCCG
GCAACCATCCACACAGCGACCTGACCTTTAACCCCTCCTCAGCCTTAGAGGGTCAGGCCGGAGCACAGGG
AGCATCCGACATGCCGGAACCTTCACTGGATCTACTGCCGGAACTCACAAACCCGGATGAGCTTCTTTCC
TACCTGGACCCCCCCGACCTTCCAAGCAATAGCAACGATGACCTCCTGTCTCTCTTTGAGAACAACTGA

Translation (1072 aa):
MNSMDRHIQQTNDRLQCIKQHLQNPANFHNAATELLDWCGDPRAFQRPFEQSLMGCLTVVSRVAAQQGFD
LDLGYRLLAVCAANRDKFTPKSAALLSSWCEELGRLLLLRHQKSRQNDPPGKLPMQPPLSSMSSMKPTLS
HSDGSFPYDSVPWQQNTNQPPGSLSVVTTVWGVTNTSQSQVLGNPMANANNPMNPGGNPMASGMSTSNPG
INSPQFAGQQQQFSTKAGPAQPYIQPNMYGRPGYPGSGGFGASYPGGPSAPAGMGIPPHTRPPADFTQPA
AAAAAAAVAAAAATATATATATVAALQETQNKDINQYGPVCSSFQMGPTQAYNSQFMNQPGPRGPASMGG
SLNPAGMAAGMTPSGMSGPPMGMNQPRPPGISPFGTHGQRMPQQTYPGPRPQSLPIQSIKRPYPGEPNYG
NQQYGPNSQFPTQPGQYPTPNPPRPLTSPNYPGQRMPSQPSTGQYPPPTVNMGQYYKPEQFNGQNNTFSS
GSSYSSYSQGSVNRPPRPVPVANYPHSPVPGNPTPPMTPGSSIPPYLSPSQDVKPPFPPDIKPNMSALPP
PPANHNDELRLTFPVRDGVVLEPFRLEHNLAVSNHVFHLRPTVHQTLMWRSDLELQFKCYHHEDRQMNTN
WPASVQVSVNATPLTIERGDNKTSHKPLHLKHVCQPGRNTIQITVTACCCSHLFVLQLVHRPSVRSVLQG
LLKKRLLPAEHCITKIKRNFSSVAASSGNTTLNGEDGVEQTAIKVSLKCPITFRRIQLPARGHDCKHVQC
FDLESYLQLNCERGTWRCPVCNKTALLEGLEVDQYMWGILNAIQHSEFEEVTIDPTCSWRPVPIKSDLHI
KDDPDGIPSKRFKTMSPSQMIMPNVMEMIAALGPGPSPYPLPPPPGGTSSNDYSSQGNNYQGHGNFDFPH
GNPGGTSMNDFMHGPPQLSHPPDMPNNMAALEKPLSHPMQETMPHAGSSDQPHPSIQQGLHVPHPSSQAG
PPLHHSGAPPPSQPPRQPPQAAPGNHPHSDLTFNPSSALEGQAGAQGASDMPEPSLDLLPELTNPDELLS
YLDPPDLPSNSNDDLLSLFENN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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