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Report for CCDS26911.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26911.1 Public Mus musculus 14 Capn7 23 108 98 CCDS HistoryNCBI Gene:12339Re-query CCDS DB by CCDS ID:26911.1Re-query CCDS DB by GeneID:12339See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26911.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000022451.13 ENSMUSP00000022451.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000022451.13Link to Ensembl Protein Viewer:ENSMUSP00000022451.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000022451Re-query CCDS DB by Protein ID:ENSMUSP00000022451
Original member NCBI NM_009796.3 NP_033926.1 Updated not alive Link to Nucleotide Sequence:NM_009796.3Link to Protein Sequence:NP_033926.1Re-query CCDS DB by Nucleotide ID:NM_009796Re-query CCDS DB by Protein ID:NP_033926
Current member NCBI NM_009796.4 NP_033926.1 Accepted alive Link to Nucleotide Sequence:NM_009796.4Link to Protein Sequence:NP_033926.1Re-query CCDS DB by Nucleotide ID:NM_009796Re-query CCDS DB by Protein ID:NP_033926Link to BLAST:NP_033926.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033926.1 813 Q9R1S8 813 100% 0 0

Chromosomal Locations for CCDS 26911.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 31336882 31336983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31340035 31340143 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31344442 31344599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31345459 31345526 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31347658 31347858 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31349799 31349885 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31352367 31352493 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31354095 31354180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31355265 31355358 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31358606 31358752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31359207 31359313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31360125 31360245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31363479 31363623 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31364448 31364547 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31365456 31365591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31366168 31366243 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31368056 31368201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31369198 31369260 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31369721 31369851 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31370702 31370794 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 31370878 31371022 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2442 nt):
ATGGACGCGTCGGCGCTGGAGCGGGACGCCGTGCAGTTCGCGCGGCTGGCAGTGCAGCGCGACCACGAAG
GCCGCTACTCTGAGGCGGTGTTTTACTACAAGGAAGCTGCCCAAGCTTTAATTTATGCTGAGATGGCAGG
ATCCAGCCTAGAAAGGATCCAAGAGAAGATCAATGAGTATCTGGAAAGAGTGCAAGCCCTTCACTCTGCA
GTTCAGTCAAAGAGTACTGATCCTTTGAAATCAAAACACCAGTTGGATCTAGAACGTGCCCATTTTCTTG
TTACACAAGCTTTCGATGAAGATGAAAAGGGGAATGTGGAAGATGCCATAGAATTATATACAGAAGCTGT
GGAACTCTGTCTAAAAACCTCTTCTGAAACTGCTGACAAGACTCTGCAAAATAAATTGAAACAGTTGGCT
CGACAGGCACTAGATAGAGCAGAAGCATTGAGTGAACCTTTGACAAAGCCATTTTGCAAACTCAAGTCAG
CAAATATGAAAACAAAGACTCCTCCAGTAAGAACACACTTTCCTCTAGGACCTAATCCTTTCGTTGAAAA
GCCTCAAGCATTTATAAGTCCACAGTCATGTGATGCGCAAGGACAGAAGTACACAGCAGAAGAGATAGAA
GTGCTCAGGACAACATCAAAAATAAATGGTGTAGAATATGTTCCTTTCATGAGTGTTGATCTAAGGGAAC
GCTTTGCTTATCCAATGCCTTTTTGTGATAGGTTGGGCAAGCTTCCATTATCACCTAAACAAAAAACTAC
ATTTTCTAAATGGGTACGACCGGAAGATCTCACCAACAATCCTACAATGATATACACTGTGTCCAGTTTT
AGCATAAAGCAGACAATAGTATCAGATTGTTCCTTTGTGGCATCGTTGGCTATCAGTGCAGCGTATGAGA
GACGATTCAATAAGAAGTTAATTACCAGCATAATTTACCCCCAGAATAAGGATGGAGAACCAGAGTACAA
TCCCTGTGGAAAGTATATGGTAAAGCTTCACCTCAATGGTGTTCCGAGAAAGGTGATAATTGATGACCAG
TTACCTGTTGATCACAAAGGAGAATTGCTGTGTTCTTATTCCAACAATAAAAGTGAATTGTGGGTGTCAC
TTATAGAGAAAGCATACATGAAAGTTATGGGAGGATATGATTTCCCAGGATCCAACTCAAATATTGATCT
GCATGCACTGACTGGGTGGATACCAGAAAGGATTGCCATGCATTCAGATAGCCAGACGTTCAGTAAGGAT
AACTCATTCAGAATGCTTTATCAAAGATTTCACAAAGGAGATGTCCTCATCACCGCATCGACGGGAGTAA
TGACTGAAGCTGAAGGGGAGAAGTGGGGCCTGGTTCCCACTCATGCCTATGCGGTTTTGGATATTAGAGA
GTTCAAGGGGCTGAGATTTATTCAGTTAAAAAACCCTTGGAGCCATTTACGCTGGAAAGGAAGGTACAGT
GAGAATGATGTGAAAAACTGGACCCCAGAATTGCAGAAGTATTTAAACTTTGATCCACGAACAGCTCAGA
AAATAGATAATGGAATATTTTGGATTTCCTGGGATGATCTTTGCCAGTATTATGATGTAGTTTATTTGAG
TTGGAATCCAGCTCTTTTTAAAGAATCAACTTGCATTCACAGTACTTGGGATGCTAAACAAGGACCTGTG
AAAGATGCTTATAGCCTGGCCAACAACCCCCAGTACAAATTGGAGGTGCAGTGTCCACAAGGGGGTGCTG
CAGTTTGGGTTTTGCTTAGTAGACACATAACAGACAAGGATGACTTCGCAAATAACCGTGAGTTTATCAC
AATGGTTGTGTACAAGACTGATGGCAAGAAGGTTTACTACCCAGCTGACCCACCTCCATACATTGATGGG
ATTCGAATTAACAGCCCTCATTACTTGACTAAGATAAAGCTGACCACGCCCGGGACTCACACCTTCACCC
TAGTGGTTTCTCAGTATGAGAAACAGAATACGATTCATTACACAGTCCGGGTGTATTCAGCCTGCAGCTT
TACTTTTTCGAAGATCCCTTCACCATACACCTTATCCAAACGGATAAATGGAAAGTGGAGTGGTCAAAGT
GCTGGAGGATGTGGAAATTTTCAGGAGACTCACAAAAATAACCCCATCTACCAATTCCATATAGATAAGA
CTGGACCGTTATTGATTGAGCTGAGAGGACCAAGGCAATACAGTGTTGGATTTGAGGTTGTAGCAGTTTC
CATAATGGGAGATCCTGGTCCTCATGGCTTTCAGAGGAAATCTAGTGGTGACTATAGGTGTGGATTTTGC
TACTTAGAACTGGAAAACATACCTGCTGGGATCTTTAATATCATCCCTAGTACTTTTTTGCCTAAACAAG
AAGGACCTTTTTTCTTGGACTTTAATAGTACTGTCCCCATCAAGACAACACAACTCCAATGA

Translation (813 aa):
MDASALERDAVQFARLAVQRDHEGRYSEAVFYYKEAAQALIYAEMAGSSLERIQEKINEYLERVQALHSA
VQSKSTDPLKSKHQLDLERAHFLVTQAFDEDEKGNVEDAIELYTEAVELCLKTSSETADKTLQNKLKQLA
RQALDRAEALSEPLTKPFCKLKSANMKTKTPPVRTHFPLGPNPFVEKPQAFISPQSCDAQGQKYTAEEIE
VLRTTSKINGVEYVPFMSVDLRERFAYPMPFCDRLGKLPLSPKQKTTFSKWVRPEDLTNNPTMIYTVSSF
SIKQTIVSDCSFVASLAISAAYERRFNKKLITSIIYPQNKDGEPEYNPCGKYMVKLHLNGVPRKVIIDDQ
LPVDHKGELLCSYSNNKSELWVSLIEKAYMKVMGGYDFPGSNSNIDLHALTGWIPERIAMHSDSQTFSKD
NSFRMLYQRFHKGDVLITASTGVMTEAEGEKWGLVPTHAYAVLDIREFKGLRFIQLKNPWSHLRWKGRYS
ENDVKNWTPELQKYLNFDPRTAQKIDNGIFWISWDDLCQYYDVVYLSWNPALFKESTCIHSTWDAKQGPV
KDAYSLANNPQYKLEVQCPQGGAAVWVLLSRHITDKDDFANNREFITMVVYKTDGKKVYYPADPPPYIDG
IRINSPHYLTKIKLTTPGTHTFTLVVSQYEKQNTIHYTVRVYSACSFTFSKIPSPYTLSKRINGKWSGQS
AGGCGNFQETHKNNPIYQFHIDKTGPLLIELRGPRQYSVGFEVVAVSIMGDPGPHGFQRKSSGDYRCGFC
YLELENIPAGIFNIIPSTFLPKQEGPFFLDFNSTVPIKTTQLQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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