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Report for CCDS26918.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26918.1 Public Mus musculus 14 Oxnad1 23 108 98 CCDS HistoryNCBI Gene:218885Re-query CCDS DB by CCDS ID:26918.1Re-query CCDS DB by GeneID:218885See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26918.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000022462.13 ENSMUSP00000022462.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000022462.13Link to Ensembl Protein Viewer:ENSMUSP00000022462.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000022462Re-query CCDS DB by Protein ID:ENSMUSP00000022462
Original member Current member NCBI NM_145460.2 NP_663435.2 Accepted alive Link to Nucleotide Sequence:NM_145460.2Link to Protein Sequence:NP_663435.2Re-query CCDS DB by Nucleotide ID:NM_145460Re-query CCDS DB by Protein ID:NP_663435Link to BLAST:NP_663435.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_663435.2 311 Q8VE38-1 311 100% 0 0

Chromosomal Locations for CCDS 26918.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 32091644 32091759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 32092068 32092131 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 32095365 32095471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 32096487 32096628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 32099389 32099631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 32100986 32101094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 32102257 32102411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (936 nt):
ATGGCCCACGTTGCCTTGATTCCTGGCTTGTCTCGAGGATCTGTGGGAGCCGTCTGCACTCAGGCTGCTT
CGTGGGGACTGAAGGCCAGCACTTTGCGTCACCTTACCCTAGCCAGCATAATTAAATCCAGAAGGAAAAC
GGACCACCTAGAGAGAACTGCCAGTGTCCTCCGCCGGGAGGTCATGGCTGCAGCTAAGGTGTGTGAAATC
ACTCACGAGTCTCCATCAGTGAAGAGCCTCCGTTTGCTTGTTGCTGATAAAGACTTTTCCTTTAAGGCTG
GCCAGTGGGTTGATTTCTTCATCCCAGGAGTCTCAGTGGTTGGTGGGTTTTCAATTTGCTCCAGTCCCCA
ACGGCTAGAACGAGACAGAATAATAGAACTGGCGGTGAAATATGCAGACCACCCTCCTGCTGTCTGGGTT
CACAATAAGTGCACACTTGACTCTGAAGTGGCTCTCAGAGTAGGTGGAGAGTTCTTCTTTGACCCTCAGC
CCACAGATGCCCCTCGAAACCTCATCTTGATTGCTGGAGGGGTCGGAATTAACCCCCTGCTTTCTATCCT
GCGCCACTCGGCAGATCTCCACCGGGACCACGCAGACAAAGGACGTAGCTATGAGATAGGGACAGTAAAA
CTGTTCTACAGTGCAAAGAACACCAGCGAGCTCCTGTTTAAGAAAGATATCCTCGACTTAGTACATGAAT
TCCCTGAGAAGATTTCTTGCAGTTTTCATGTTACAAAACAGACAGCACAAATCAGTGCGGAATTGAAGCC
TTATGTCACAGACGGAAGAATAACGGAGAAGGAGATAAGAGATCACATCTCAGCAGAGACTCTGTTCTAT
GTCTGTGGACCACCTCCAATGACAGACTTTTTCTCTAAGCACCTGGAAAGCTGCCACGTTCCCAAGGAAC
ACATCTGCTTTGAGAAGTGGTGGTAG

Translation (311 aa):
MAHVALIPGLSRGSVGAVCTQAASWGLKASTLRHLTLASIIKSRRKTDHLERTASVLRREVMAAAKVCEI
THESPSVKSLRLLVADKDFSFKAGQWVDFFIPGVSVVGGFSICSSPQRLERDRIIELAVKYADHPPAVWV
HNKCTLDSEVALRVGGEFFFDPQPTDAPRNLILIAGGVGINPLLSILRHSADLHRDHADKGRSYEIGTVK
LFYSAKNTSELLFKKDILDLVHEFPEKISCSFHVTKQTAQISAELKPYVTDGRITEKEIRDHISAETLFY
VCGPPPMTDFFSKHLESCHVPKEHICFEKWW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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