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Report for CCDS26922.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26922.1 Public Mus musculus 14 Drgx 23 108 98 CCDS HistoryNCBI Gene:107751Re-query CCDS DB by CCDS ID:26922.1Re-query CCDS DB by GeneID:107751See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26922.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000068938.6 ENSMUSP00000064107.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000068938.6Link to Ensembl Protein Viewer:ENSMUSP00000064107.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000068938Re-query CCDS DB by Protein ID:ENSMUSP00000064107
Original member Current member EBI ENSMUST00000187377.6 ENSMUSP00000140687.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000187377.6Link to Ensembl Protein Viewer:ENSMUSP00000140687.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000187377Re-query CCDS DB by Protein ID:ENSMUSP00000140687
Original member Current member NCBI NM_001001796.4 NP_001001796.1 Accepted alive Link to Nucleotide Sequence:NM_001001796.4Link to Protein Sequence:NP_001001796.1Re-query CCDS DB by Nucleotide ID:NM_001001796Re-query CCDS DB by Protein ID:NP_001001796Link to BLAST:NP_001001796.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001001796.1 220 Q8BYH0-2 220 100% 0 0

Chromosomal Locations for CCDS 26922.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 32600031 32600064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 32603896 32603993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 32605218 32605319 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 32608076 32608254 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 32608341 32608453 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 32647041 32647177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (663 nt):
ATGTTTTATTTCCACTGTCCGCCACAGCTAGAGGGCACTGCGCCTTTTGGGAACCACTCTACAGGGGATT
TTGATGATGGGTTTCTTAGAAGAAAACAGCGCAGAAATCGAACGACCTTCACTCTTCAGCAGCTGGAAGC
TCTGGAGGCAGTCTTTGCCCAAACACACTACCCAGATGTCTTCACCAGAGAAGAGTTAGCCATGAAAATA
AACCTCACAGAAGCCAGAGTGCAGGTTTGGTTCCAGAACCGAAGAGCCAAATGGAGGAAGACAGAGAGAG
GGGCCTCTGACCAGGAGCCAGGGGCCAAGGAACCCATGGCAGAGGTGACACCACCGCCAGTGAGGAACAT
CAACTCTCCACCCCCAGGGGACCAGACCCGGAGCAAGAAGGAGGCCCTGGAGGCCCAGCAGAGCCTGGGA
CGCACAGTGGGCCCTACCGGGCCTTTCTTCCCCTCCTGCTTGCCAGGGACCCTCCTGAACACAGCCACGT
ATGCCCAGGCCCTGTCCCATGTGGCATCTCTGAAAGATCATTTCCGAGCAATGCTATGTTCTGGAAGCTT
TGGGTTCAGAGGGGAACAGACCCAACAGAGAGCCTTAACTCCAAACCTGTACCCTTTCTTGATAGACGAG
AGATGCTCAGCAGTAGATATGACACAAGGATGA

Translation (220 aa):
MFYFHCPPQLEGTAPFGNHSTGDFDDGFLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKI
NLTEARVQVWFQNRRAKWRKTERGASDQEPGAKEPMAEVTPPPVRNINSPPPGDQTRSKKEALEAQQSLG
RTVGPTGPFFPSCLPGTLLNTATYAQALSHVASLKDHFRAMLCSGSFGFRGEQTQQRALTPNLYPFLIDE
RCSAVDMTQG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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