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Report for CCDS2708.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2708.1 Public Homo sapiens 3 ZNF662 24 110 108 CCDS HistoryNCBI Gene:389114Re-query CCDS DB by CCDS ID:2708.1Re-query CCDS DB by GeneID:389114See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2708.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000440367.7 ENSP00000405047.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000440367.7Link to Ensembl Protein Viewer:ENSP00000405047.2Re-query CCDS DB by Nucleotide ID:ENST00000440367Re-query CCDS DB by Protein ID:ENSP00000405047
Original member Current member NCBI NM_207404.4 NP_997287.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_207404.4Link to Protein Sequence:NP_997287.2Re-query CCDS DB by Nucleotide ID:NM_207404Re-query CCDS DB by Protein ID:NP_997287Link to BLAST:NP_997287.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_997287.2 426 Q6ZS27-1 426 100% 0 0

Chromosomal Locations for CCDS 2708.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 42908115 42908148 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 42908793 42908909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 42913201 42913302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 42914327 42915354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1281 nt):
ATGCTGGAGAATTATGGGGCTGTGGCTTCCCTGGCAGCATTTCCATTTCCCAAACCGGCTCTGATTTCCC
AGCTGGAGCGAGGGGAAACACCCTGGTGCTCGGTTCCTCGGGGAGCTCTGGATGGAGAGGCCCCAAGGGG
CATCTCCTCAGGATATCCATTTCTAAAGCCTGCTGGGATTTCCCATCCTGAGCAGGTGGAAGAGCCATTA
AACCTGAAACTGCAAGGAGAGGGTCCAAGCCTGATTTGTCCGGAGGGTGTGTTGAAGAGGAAGAAAGAAG
ATTTTATTCTGAAGGAGGAAATTATTGAGGAAGCACAGGACCTCATGGTCCTATCAAGTGGACCCCAGTG
GTGTGGATCCCAGGAATTATGGTTTGGGAAAACCTGTGAAGAGAAAAGCAGGTTAGGGAGATGGCCTGGT
TACCTCAATGGGGGACGTATGGAAAGTTCTACAAATGATATTATAGAAGTGATTGTCAAGGATGAGATGA
TCTCAGTAGAAGAGAGTTCAGGGAATACTGATGTCAATAACCTCCTTGGTATACATCACAAAATTCTAAA
TGAGCAAATATTCTATATATGTGAGGAATGCGGCAAGTGTTTTGATCAAAATGAGGACTTTGATCAACAC
CAGAAAACTCATAATGGAGAGAAGGTCTATGGATGTAAGGAATGTGGGAAGGCTTTCAGTTTTCGATCAC
ATTGCATTGCACATCAGAGAATTCACAGTGGGGTGAAACCCTATGAATGTCAAGAATGTGCTAAGGCCTT
TGTTTGGAAGTCAAACCTGATTCGTCACCAGAGAATACATACTGGAGAGAAACCCTTTGAATGTAAGGAA
TGTGGGAAGGGCTTTAGTCAGAACACAAGCCTTACGCAACATCAACGGATCCACACTGGTGAGAAACCAT
ACACATGTAAGGAATGTGGGAAAAGCTTTACTCGAAACCCAGCCCTTCTTCGACATCAGAGAATGCACAC
TGGGGAGAAGCCTTACGAATGTAAGGACTGTGGGAAGGGCTTCATGTGGAACTCAGATCTTTCTCAGCAC
CAGAGGGTCCACACTGGGGACAAGCCTCATGAATGTACTGACTGTGGGAAAAGCTTCTTTTGCAAGGCAC
ATCTTATTCGACATCAAAGAATCCATACTGGGGAAAGACCCTATAAATGTAATGACTGTGGGAAGGCCTT
CAGTCAGAATTCTGTCTTAATTAAGCACCAGAGGCGCCATGCTAGAGACAAACCCTATAACTGTCAGATC
TCTCACCTTCTTGAACATTAG

Translation (426 aa):
MLENYGAVASLAAFPFPKPALISQLERGETPWCSVPRGALDGEAPRGISSGYPFLKPAGISHPEQVEEPL
NLKLQGEGPSLICPEGVLKRKKEDFILKEEIIEEAQDLMVLSSGPQWCGSQELWFGKTCEEKSRLGRWPG
YLNGGRMESSTNDIIEVIVKDEMISVEESSGNTDVNNLLGIHHKILNEQIFYICEECGKCFDQNEDFDQH
QKTHNGEKVYGCKECGKAFSFRSHCIAHQRIHSGVKPYECQECAKAFVWKSNLIRHQRIHTGEKPFECKE
CGKGFSQNTSLTQHQRIHTGEKPYTCKECGKSFTRNPALLRHQRMHTGEKPYECKDCGKGFMWNSDLSQH
QRVHTGDKPHECTDCGKSFFCKAHLIRHQRIHTGERPYKCNDCGKAFSQNSVLIKHQRRHARDKPYNCQI
SHLLEH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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