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Report for CCDS2714.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2714.1 Public Homo sapiens 3 ZKSCAN7 24 110 108 CCDS HistoryNCBI Gene:55888Re-query CCDS DB by CCDS ID:2714.1Re-query CCDS DB by GeneID:55888See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2714.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000341840.7 ENSP00000345404.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000341840.7Link to Ensembl Protein Viewer:ENSP00000345404.3Re-query CCDS DB by Nucleotide ID:ENST00000341840Re-query CCDS DB by Protein ID:ENSP00000345404
Original member Current member EBI ENST00000431636.5 ENSP00000416681.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000431636.5Link to Ensembl Protein Viewer:ENSP00000416681.1Re-query CCDS DB by Nucleotide ID:ENST00000431636Re-query CCDS DB by Protein ID:ENSP00000416681
Original member Current member NCBI NM_001288591.2 NP_001275520.1 Accepted alive Link to Nucleotide Sequence:NM_001288591.2Link to Protein Sequence:NP_001275520.1Re-query CCDS DB by Nucleotide ID:NM_001288591Re-query CCDS DB by Protein ID:NP_001275520Link to BLAST:NP_001275520.1
Original member Current member NCBI NM_025169.3 NP_079445.1 Accepted alive Link to Nucleotide Sequence:NM_025169.3Link to Protein Sequence:NP_079445.1Re-query CCDS DB by Nucleotide ID:NM_025169Re-query CCDS DB by Protein ID:NP_079445Link to BLAST:NP_079445.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001275520.1 276 Q9P0L1-2 276 100% 0 0
NP_079445.1 276 Q9P0L1-2 276 100% 0 0

Chromosomal Locations for CCDS 2714.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 44557048 44557470 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 44565487 44565655 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 44567912 44568003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 44568307 44568433 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 44582972 44582991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (831 nt):
ATGACCACTGCAGGCAGGGGAAATTTAGGCCTCATCCCCAGGAGCACTGCTTTCCAGAAGCAAGAGGGGC
GCCTGACTGTGAAGCAGGAGCCAGCAAACCAGACCTGGGGGCAGGGCAGCAGTCTCCAGAAGAACTATCC
TCCTGTCTGCGAAATCTTCCGGCTACACTTCAGGCAATTGTGTTACCACGAGATGTCTGGGCCGCAGGAA
GCATTGAGCCGGCTTCGGGAGCTCTGCCGCTGGTGGCTCATGCCAGAGGTGCACACCAAGGAGCAGATCC
TGGAGCTGCTGGTGCTTGAGCAGTTCCTGAGCATCCTCCCTGGGGAGCTCCGGACCTGGGTGCAGCTGCA
TCACCCTGAGAGTGGTGAGGAGGCTGTGGCTGTGGTGGAGGATTTCCAGAGACACCTCAGTGGATCAGAG
GAGGTTTCAGCCCCAGCACAGAAACAGGAAATGCATTTTGAGGAGACAACAGCTCTGGGTACAACAAAGG
AATCTCCTCCTACCTCACCCCTCAGTGGGGGCTCAGCCCCTGGAGCCCACCTGGAGCCTCCTTATGACCC
AGGGACACACCACCTCCCCAGTGGGGACTTCGCTCAATGTACTTCTCCAGTTCCTACCCTTCCTCAAGTG
GGGAACTCAGGAGACCAAGCAGGGGCAACTGTACTTCGGATGGTCAGGCCCCAGGATACTGTGGCATATG
AGGACCTATCTGTAGACTACACTCAGAAGAAATGGAAAAGTCTCACACTCAGTCAGAGAGCCCTGCAGTG
GAACATGATGCCAGAAAATCACCATAGCATGGCCTCCTTGGGCTGGAGTACAATGGCGTGA

Translation (276 aa):
MTTAGRGNLGLIPRSTAFQKQEGRLTVKQEPANQTWGQGSSLQKNYPPVCEIFRLHFRQLCYHEMSGPQE
ALSRLRELCRWWLMPEVHTKEQILELLVLEQFLSILPGELRTWVQLHHPESGEEAVAVVEDFQRHLSGSE
EVSAPAQKQEMHFEETTALGTTKESPPTSPLSGGSAPGAHLEPPYDPGTHHLPSGDFAQCTSPVPTLPQV
GNSGDQAGATVLRMVRPQDTVAYEDLSVDYTQKKWKSLTLSQRALQWNMMPENHHSMASLGWSTMA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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