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Report for CCDS27222.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27222.1 Public Mus musculus 14 Stmn4 23 108 98 CCDS HistoryNCBI Gene:56471Re-query CCDS DB by CCDS ID:27222.1Re-query CCDS DB by GeneID:56471See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27222.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000074523.12 ENSMUSP00000074113.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000074523.12Link to Ensembl Protein Viewer:ENSMUSP00000074113.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000074523Re-query CCDS DB by Protein ID:ENSMUSP00000074113
Original member NCBI NM_019675.3 NP_062649.1 Updated not alive Link to Nucleotide Sequence:NM_019675.3Link to Protein Sequence:NP_062649.1Re-query CCDS DB by Nucleotide ID:NM_019675Re-query CCDS DB by Protein ID:NP_062649
Current member NCBI NM_019675.4 NP_062649.1 Accepted alive Link to Nucleotide Sequence:NM_019675.4Link to Protein Sequence:NP_062649.1Re-query CCDS DB by Nucleotide ID:NM_019675Re-query CCDS DB by Protein ID:NP_062649Link to BLAST:NP_062649.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_062649.1 189 P63042 189 100% 0 0

Chromosomal Locations for CCDS 27222.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 66354433 66354445 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 66355586 66355681 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 66356709 66356917 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 66357846 66358037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 66361075 66361134 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (570 nt):
ATGACTCTTGCAGCCTATAAGGAGAAGATGAAGGAACTCCCACTAGTGTCTCTGTTCTGCTCTTGCTTCT
TGTCTGATCCCCTGAATAAATCATCCTACAAATATGAAGCAGATACAGTAGACCTGAACTGGTGCGTCAT
CTCTGATATGGAAGTCATCGAGCTGAACAAGTGCACCTCGGGCCAGTCCTTTGAAGTCATCTTGAAGCCA
CCTTCCTTTGACGGGGTGCCTGAGTTTAATGCCTCCCTCCCAAGACGGCGAGACCCATCATTAGAAGAGA
TTCAGAAGAAGCTAGAAGCAGCAGAGGAGCGAAGGAAGTACCAGGAAGCTGAACTCCTGAAACACCTCGC
GGAGAAACGAGAGCACGAGCGAGAGGTGATCCAGAAAGCTATCGAAGAAAACAATAACTTCATCAAGATG
GCAAAAGAGAAGCTGGCCCAGAAGATGGAGTCCAATAAGGAGAACCGGGAGGCCCATCTGGCTGCCATGT
TGGAGCGGCTGCAAGAGAAGGACAAGCACGCAGAGGAGGTGCGGAAAAACAAGGAGCTGAAGGAAGAGGC
CTCCAGGTAA

Translation (189 aa):
MTLAAYKEKMKELPLVSLFCSCFLSDPLNKSSYKYEADTVDLNWCVISDMEVIELNKCTSGQSFEVILKP
PSFDGVPEFNASLPRRRDPSLEEIQKKLEAAEERRKYQEAELLKHLAEKREHEREVIQKAIEENNNFIKM
AKEKLAQKMESNKENREAHLAAMLERLQEKDKHAEEVRKNKELKEEASR


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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