NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS27296.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27296.1 Public Mus musculus 14 Naa16 23 108 98 CCDS HistoryNCBI Gene:66897Re-query CCDS DB by CCDS ID:27296.1Re-query CCDS DB by GeneID:66897See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 27296.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000022597.14 ENSMUSP00000022597.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000022597.14Link to Ensembl Protein Viewer:ENSMUSP00000022597.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000022597Re-query CCDS DB by Protein ID:ENSMUSP00000022597
Original member Current member NCBI NM_025832.2 NP_080108.1 Accepted alive Link to Nucleotide Sequence:NM_025832.2Link to Protein Sequence:NP_080108.1Re-query CCDS DB by Nucleotide ID:NM_025832Re-query CCDS DB by Protein ID:NP_080108Link to BLAST:NP_080108.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_080108.1 864 Q9DBB4 864 100% 0 0

Chromosomal Locations for CCDS 27296.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 79335734 79335931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 79336388 79336485 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 79339534 79339677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 79340038 79340136 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 79340987 79341095 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 79343126 79343319 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 79344895 79345108 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 79351373 79351501 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 79355721 79355873 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 79356367 79356536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 79359456 79359528 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 79369078 79369184 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 79370002 79370097 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 79374736 79374855 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 79377368 79377521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 79381495 79381629 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 79383236 79383393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 79384654 79384758 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 79387022 79387106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 79390562 79390615 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2595 nt):
ATGCCCTGCGTGCAGCTGCCCGCCAAGGAGAGCGCCCTCTTCAAGCGCGTGCTGAAATGTTATGAACAGA
AGCAGTACAAAAATGGCCTCAAGTTTTGCAAGATGATTCTTTCTAACCCGAAGTTTGCTGAACATGGAGA
GACTTTGGCTATGAAAGGATTAATACTGAACTGTTTAGGAAAAAGAGAAGAAGCATATGAATTTGTTCGT
AAAGGACTTCGCAGTGACGTCAGGAGTCATGTCTGTTGGCATGTATACGGCCTCCTGCAACGTTCTGATA
AGAAGTATGATGAAGCTATTAAATGCTACCGAAATGCCCTCAAATTAGATAAAGATAATTTGCAAATCTT
GAGGGATCTCTCTCTATTGCAGATTCAGATGAGAGACCTTGAAGGTTATCGAGAGACGAGATACCAACTT
CTTCAGTTGCGCCCAACACAGCGTGCTTCCTGGATTGGATATGCCATCGCTTATCATTTGCTGAAAGATT
ATGATACAGCGCTAAAGCTATTAGAAGAATTTAGACAAACGCAGCAAGTTCCTCCCAACAAAATAGCTTA
TGAATATAGTGAACTGTTACTATATCAGAATCAAGTGATGAGAGAGGCAAATTTATTTCAGGAATCTTTG
GAACATATAGAAACATATGAGAAGTTGATATGTGATAAACTTTTGGTGGAAGAAATTAAGGGGGAAATGC
TGTTGAAATTGGGAAGACTAAAAGAAGCCAGTGAAGTATTCAGAAACTTGATTGATTGGAATGCTGAAAA
TTGGTGTTATTATGAAGGCTTGGAAAAGGCATTGCAACTTCGTTCTCTAGACGAGAGGCTTCAGCTTTAT
GAGGAAGTCAGCAAGCAGCACCCCAGAGCAGTTTCACCCAGGAGGCTGCCGCTGAGTTTCGCCCCAGGTA
AGAAGTTTCGAGAACTCATGGATAAGTTCCTGAGACCAAACTTTAGCAAAGGGTGTCCACCTCTGTTCAC
TACTTTGAAATCCTTGTATTGTGATACAGAAAAGGTTTCAATAATCCAGGAACTTGTTACTAATTATGAA
GCCTCTCTTAAAATGAATGGCTATTTTAGCCCTTATGAGAACGGGGAGAAGGAACCCCCAACAACTCTAA
TCTGGGTCCAGTATTTCCTGGCACAGCATTATGATAAACTTGGGCAGTATTTTCTGGCTTTGGAATATAT
TAATGCTGTAATTGCTAGTACTCCAACTCTAATAGAACTATTCTACATGAAAGCAAAAATTTACAAGCAT
ATGGGTAATCTCAAAGAAGCCGCACAGTGGATGGATGAGGCACAGTCTTTGGACACGGCTGACAGGTTCA
TCAATTCCAAATGTGCCAAATACATGCTTCGAGCAAATATGATAAAAGAAGCAGAGGAAATGTGCTCCAG
GTTCACAAGGGAAGGAACATCTGCCATGGAGAATCTGAATGAAATGCAGTGTATGTGGTTTGAGACGGAG
TGCATTTCTGCCTATCAGCGCCTGGGGAGATATGGGGATGCCTTGAAAAAGTGCCATGAAGTAGAGAGGC
ATTTTCTTGAGATAACCGATGATCAGTTTGACTTCCATACATACTGCATGAGAAAGATGACCCTCCGTGC
TTATGTTGGCCTCTTGAGATTAGAAGATGCTCTCAGAAGACATACTTTTTATTTCAAGGCTGCTAGATCA
GCAATTGAAATATATTTGAAATTACATGATAACCCTTTAACCAATGACAGCAAACAACAAGACATAGATT
CAGAAAACCTGTCAGCCAAAGAAATGAAGAAAATGCTTAGCAAGCAAAGAAGAGCTCAGAAAAAGGCTAA
GGTAGAAGAAGAGAGAAAGCACACAGAAAGGGAACGCCAACAGAAAAACCAAAAGAAAAAAAGAGAAGAA
GAAGAAGAAGTTACCAGTGGTCATAAGGAAGAACTTATTCCTGAAAAACTAGAAAGGGTTGACAATCCAT
TAGAAGAAGCCATCAAGTTCCTCACTCCTCTGAAAACCCTTGCTGCTGAGAGCATTGATACCCACCTGCT
GGCCTTTGAAATATATTTTAGAAAAGGGAAGTTTTTGCTAATGTTGCAGTCTGTTAAACGAGCCTTTGCC
ATTGAAAGTAATAATCCTTGGTTACATGAATGCTTGATTAAGTTTTCTAAATCTGTCTCTAATCACAGTA
ATCTTCCAGACATTGTGAGCAAAGTTCTAGCTCAAGAAATGAAGAAGATATTTGTCAACAAAGATTTGCA
CAGCTTTAATGAGGATTTCCTCAGACACAATGCTACCTCTCTTCAGCATCTACTTGCAGGTGCTAAAATG
ATGTATTTTCTGGACAAGTCAAGGCAAGAAAAAGCAATTGCTACAGCCACTAGGTTGGATGAAACTATAA
AAAATAAAAATGTGAAGACTCTAATAAAGGTGTCTGAGGCCCTCCTGGATGGCAGCTTTGGGAACTGTAG
CTCCCAATATGAAGAGTATAGGAAGACCTGCCATAGCCTGCTCCCACTCACACCTGCTTTCCTGCCTGCT
GCGAGGGAAGCCCTCGGTCTCAGTGCTGAGCTGAACCACACAGCTGACCACAAGCTCTTAATGAATGAAA
TTTGA

Translation (864 aa):
MPCVQLPAKESALFKRVLKCYEQKQYKNGLKFCKMILSNPKFAEHGETLAMKGLILNCLGKREEAYEFVR
KGLRSDVRSHVCWHVYGLLQRSDKKYDEAIKCYRNALKLDKDNLQILRDLSLLQIQMRDLEGYRETRYQL
LQLRPTQRASWIGYAIAYHLLKDYDTALKLLEEFRQTQQVPPNKIAYEYSELLLYQNQVMREANLFQESL
EHIETYEKLICDKLLVEEIKGEMLLKLGRLKEASEVFRNLIDWNAENWCYYEGLEKALQLRSLDERLQLY
EEVSKQHPRAVSPRRLPLSFAPGKKFRELMDKFLRPNFSKGCPPLFTTLKSLYCDTEKVSIIQELVTNYE
ASLKMNGYFSPYENGEKEPPTTLIWVQYFLAQHYDKLGQYFLALEYINAVIASTPTLIELFYMKAKIYKH
MGNLKEAAQWMDEAQSLDTADRFINSKCAKYMLRANMIKEAEEMCSRFTREGTSAMENLNEMQCMWFETE
CISAYQRLGRYGDALKKCHEVERHFLEITDDQFDFHTYCMRKMTLRAYVGLLRLEDALRRHTFYFKAARS
AIEIYLKLHDNPLTNDSKQQDIDSENLSAKEMKKMLSKQRRAQKKAKVEEERKHTERERQQKNQKKKREE
EEEVTSGHKEELIPEKLERVDNPLEEAIKFLTPLKTLAAESIDTHLLAFEIYFRKGKFLLMLQSVKRAFA
IESNNPWLHECLIKFSKSVSNHSNLPDIVSKVLAQEMKKIFVNKDLHSFNEDFLRHNATSLQHLLAGAKM
MYFLDKSRQEKAIATATRLDETIKNKNVKTLIKVSEALLDGSFGNCSSQYEEYRKTCHSLLPLTPAFLPA
AREALGLSAELNHTADHKLLMNEI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH