CCDS Home FTP Process Releases & Statistics
Collaborators EBI HGNC MGI NCBI
Contact Us email CCDS
Genome Displays Related Resources Gene HomoloGene MANE RefSeq
|
|
Report for CCDS27560.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
27560.1 |
Public |
Mus musculus |
15 |
Scrib |
23 |
108 |
98 |
|
Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 27560.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
|
|
EBI |
ENSMUST00000002603.11 |
ENSMUSP00000002603.5 |
Accepted |
alive |
|
|
|
NCBI |
NM_134089.2 |
NP_598850.1 |
Accepted |
alive |
|
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_598850.1 |
1665 |
Q80U72-3 |
1665 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 27560.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (4998 nt): ATGCTGAAGTGCATCCCGCTCTGGCGTTGTAACCGGCACGTGGAGTCGGTGGATAAGCGGCACTGCTCGC TGCAGGTTGTGCCAGAGGAGATTTACCGCTACAGTCGTAGCCTCGAGGAGCTGCTCCTCGACGCCAACCA GCTGCGCGAGCTACCTAAGCCCTTCTTCCGACTGTTGAACTTGAGAAAGTTGGGCCTCAGTGACAACGAG ATCCAGCGGCTGCCTCCTGAAGTGGCCAACTTCATGCAGCTGGTGGAGCTAGATGTGTCCCGGAACGATA TTCCTGAGATACCTGAGAGCATAAAGTTCTGTAAGGCTCTGGAGATTGCAGACTTCAGTGGGAACCCCCT GTCTAGACTTCCGGATGGCTTCACACAGCTACGCAGCCTGGCTCACCTGGCCCTGAATGACGTGTCCCTG CAGGCACTGCCTGGAGATGTGGGCAACCTGGCCAATCTGGTGACCCTGGAACTCCGGGAGAACCTGCTTA AATCTCTCCCTGCGTCCCTGTCTTTCCTGGTGAAGCTGGAACAGCTGGATCTGGGAGGCAACGACCTGGA AGTGCTGCCTGACACCCTGGGGGCTCTGCCTAACCTTCGGGAGCTATGGTTAGACCGAAACCAACTGTCA GCGCTGCCCCCGGAGCTAGGCAATCTGCGGCGGCTGGTGTGCCTGGATGTGTCAGAGAACAGGCTGGAGG AGCTGCCTGTGGAGTTGGGTGGGCTGGCACTGCTCACGGATCTGCTGCTTTCCCAGAACTTGCTTCAGCG GCTGCCAGAGGGCATCGGTCAGCTGAAGCAGCTGTCTATCCTGAAGGTGGACCAGAACCGGCTGTGTGAG GTCACTGAGGCCATAGGGGACTGTGAGAACCTCTCGGAGCTGATCCTCACGGAGAACCTGTTAACGGCCT TACCCCACTCGCTGGGCAAGCTGACCAAGCTGACTAACCTCAATGTGGACCGGAACCATCTTGAGGTGCT GCCTCCTGAAATCGGAGGCTGTGTGGCCCTTAGTGTCCTCTCTTTGAGAGACAATCGCCTGGCTGTCCTC CCTCCTGAGCTTGCCCATACCGCTGAGCTGCACGTGCTTGATGTGGCTGGGAACCGGCTGCGGAGTCTGC CGTTTGCGCTCACCCACCTCAACCTCAAGGCACTGTGGCTGGCCGAGAACCAGGCACAGCCCATGCTCCG CTTCCAGACTGAGGATGATGCCCAGACGGGTGAAAAGGTGCTCACCTGCTACCTGCTGCCCCAGCAGCCC CTGCCAAGTCTCGAAGACGCTGGACAGCAGAGCAGTCCCTCAGAGAGCTGTAGTGATGCCCCTCTGAGCC GTGTCAGTGTCATCCAGTTCGAGGACACCCTGGAAGGTGAAGAGGATGCTGAGGAAGCTGCGGCCGAGAA GCGGGGCCTACAGCGTAGGGCCACACCTCATCCCAGTGAGCTCAAGGTGATGAAGAGGGGCATTGAAGAG CGCCGGAATGAGGCCTTCGTCTGCAAGCCTGACCCCAGCCCACCCTCGCCTTCAGAGGAGGAGAAGAGGC TGAGTGCAGAGTCTGCCTTGAGTGGAGGCTCTGTCCCGTCAGCAAGCACAGCCTCGGAAGGTGAGCCTGA GATCCTGCCGGCTGAGGTACAAGGGCTAGGCCAGCATGAGGCCATGCCTGCACAGGAGGAGTATACAGAA GACGACTATAACGAGCCCACAGTGCACTTTGCAGAGGACACACTGATCCCTAGGGAAGACGGTGAAAGTG AAGAGGGACAGCCTGAGGCTGCCTGGCCGCTGCCTAGTGGCCGGCAGAGGCTCATCCGCAAAGACACGCC CCACTACAAGAAGCACTTCAAGATCTCCAAGCTCCCACAGCCTGAAGCTGTCGTGGCCCTGCTGCAAGGG GTGCAGACCGACAGGGAGGGCCCCACTGCAGGTTGGCACAATGGCCCACACACACCTTGGGCTCCTCGAG CCCATGAGGAGGAAGAGGAGGAGGAGGAGGAGAACAGGGATGAGGAGGAAGGCGAGGCCACCACGGAAGA AGATGACAAAGAAGAGGCTGTGGCTTCTGCTCCCTCTGTCAAGGGGGTGTCGTTTGACCAGGCCAATAAC CTGCTGATAGAGCCTGCTCGCATTGAGGAGGAAGAGTTAACACTCACGATCGTGCGGCAGACGGGGGGCC TGGGCATCAGTATCGCAGGGGGAAAAGGCTCTACCCCCTACAAAGGAGATGACGAGGGCATTTTCATCTC TCGAGTGTCTGAAGAGGGCCCTGCAGCCCGTGCTGGAGTCCGAGTTGGTGACAAACTTCTTGAGGTGAAT GGTGTAGCCTTGCAGGACGCAGAGCACCACGAGGCCGTGGAAGCACTTCGGGGGGCAGGTGCTGCTGTGC AGATGCGAGTGTGGAGGGAAAGAATGGTGGAGCCGGAGAACGCAGTCACTATTACCCCCTTACGCCCTGA AGATGACTATAGTCCCCGAGAGTGGCGGGGAGGTGGCCTGCGCCTTCCCCTGCTCCAGCCTGAGACTCCT GTATCCCTCCGTCAGCGTCATGCTGCCTGTCTCGTGCGCAGTGAAAAGGGGCTGGGCTTCAGCATTGCTG GTGGAAAGGGCTCCACACCTTACCGGGCTGGTGATGGGGGCATCTTTATATCCCGCATTGCAGAGGGAGG GGCTGCTCACCGGGCAGGCACTCTACAGGTTGGCGACCGTGTCCTCTCGATCAATGGAGTGGACATGACT GAGGCCAGGCACGACCATGCTGTCTCCCTGCTGACTGCTGCTTCCCCTACCATCTCCCTGCTTCTGGAGA GGGAGACTGGAGGGACTTACCCACCTAGCCCTCCCCCCCATTCCTCCCCAACCCCTGCTGCTACTGTTGC TGCTACCGTGAGCACTGCTGTCCCCGGAGAACCTCTGCTACCTAGGCTGTCCCCTAGCCTCTTGGCCACT GCCTTGGAAGGACCATACCCTGTGGAGGAAATCTGCCTGCCCAGGGCTGGTGGCCCATTGGGGCTTAGCA TTGTAGGAGGTTCTGATCACTCCAGCCACCCGTTTGGTGTCCAAGATCCTGGTGTATTCATCTCCAAGGT GCTTCCTCGGGGCCTAGCTGCTCGCTGTGGCCTTCGGGTTGGGGACCGCATCCTAGCAGTGAATGGGCAG GATGTTCGGGAGGCCACACATCAAGAGGCAGTCAGTGCCCTGCTCAGGCCCTGCCTGGAGCTGTGTCTGC TTGTGCGGAGGGACCCACCACCCCCGGGCATGCGGGAACTCTGCATCCAGAAAGCCCCTGGGGAGAAGCT GGGTATCAGCATCCGCGGAGGTGCCAAGGGTCACGCGGGGAACCCCTGTGACCCTACAGATGAGGGCATC TTTATCTCCAAGGTGAGCCCCACAGGAGCTGCCGGGCGTGATGGGCGGCTGCGTGTGGGGCTGCGGCTGC TAGAAGTGAACCAACAGAGCCTGCTGGGCCTTACCCATGCGGAAGCAGTGCAGCTGCTGCGCAGCGTAGG CGACACCCTTACCGTGCTTGTCTGTGATGGTTTTGACACCAGCACCACCACAGCCCTGGAGGTGTCCCCA GGTGTCATTGCCAACCCATTTGCAGCAGGCCTTGGCCACAGGAACAGTCTGGAAAGCATTTCGTCCATTG ACCGGGAACTGAGTCCTGAAGGCCCAGGCAAGGAGAAAGAGTTGGCCAGTCAAGCCCTACCCTGGGAGTC TGAGTCTGCAGAGACCACGGGTCGGAATCTAGAGCCCCTGAAGCTGGACTACCGTGCCCTGGCCGCCCTG CCCAGTGCTGGGAGTTTACAGAGAGGACCATCTGCGACCACCGGAGGGAAGACGACTGAGGCTCCCTGTT CCCCTGGCAGTCAGCAAACAAAACCGGGGGTGATCCAGCCATTGGCTCAGGCCTGGCCAAGGAACTCCCC GGCCCCCAGGGGCAGAGGTGGTCCCTGTTCTCCACCCTCCCCTGATGAACTGCCAGCCAATGTGAAGCAG GCGTATAGGGCCTTTGCAGCTGTGCCCACCGTGCATCCTCCTGAGAACAGTGCTACCCAGCCTCCAACAC CTGGTCCCGCAGCCTCCCCAGAGCAGCTGTCCTTCCGTGAACGACAAAAGTACTTCGAGCTGGAGGTACG GGTGCCTCAAGCAGAGGGTCCCCCAAAGCGTGTGTCCCTGGTGGGTGCTGATGACTTGCGGAAGATGCAA GAGGAGGAAGCTCGCAAGCTGCAGCAGAAGAGGGCACAGATGCTTCGGGAAGAAGCAGTAACCTCAGGGC CTGACATGGGGCTCGCCTCAGACAGGGAGTCCCCAGATGATCAGCAGGAGGCTGAGCAGCCCTGGGCTGT GCCAAGCCATGCAGGGGGCTCTAGCCCATCATCACCCCCACCCCTGGGAGGCAACGCCCCTGTGAGGACA GCCAAAGCTGAGCGACGCCATCAGGAACGGTTACGCATGCAGAGCCCCGAGCTTCCTGCCCCGGAACGGG CCCTGTCTCCTGCAGAGCGACGGGCTCTAGAGGCAGAGAAGCGAGCTCTGTGGAGGGCAGCCAGAATGAA GTCTCTGGAGCAGGATGCTCTCCGTGCACAGATGGTCCTTAGCAAGTCCCAGGAAGGCCGTGGCAAGAGA GGACCCTTGGAACGGCTGGCTGAGGCCCCTTCACCTGCCCCCACCCCATCACCCACACCATTGGAAGACT TCGGCCTCCAGACCAGTGCCTCCCCTGGACGCTTGCCTTTGTCTGGAAAGAAGTTTGACTACAGGGCCTT CGCAGCCCTGCCCTCTTCCAGACCTGTGTATGACATCCAGTCACCAGATTTCGTGGAGGAGCTGAGGACT TTGGAAGCATCTCCCAGTCCTGGCTCCCAGGAAGAAGATGGAGAAGTGGCCTTGGTGCTCCTTGGCAGGC CCTCACCTGGCGCTGTGGGCCCTGAAGACATGACGCTGTGCAGCAGCCGTCGGTCTGTGCGGCCGGGACG CCGGGGCCTGGGCCCTGTGCCCTCCTAG
Translation (1665 aa): MLKCIPLWRCNRHVESVDKRHCSLQVVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNE IQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSL QALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLS ALPPELGNLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQLSILKVDQNRLCE VTEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRNHLEVLPPEIGGCVALSVLSLRDNRLAVL PPELAHTAELHVLDVAGNRLRSLPFALTHLNLKALWLAENQAQPMLRFQTEDDAQTGEKVLTCYLLPQQP LPSLEDAGQQSSPSESCSDAPLSRVSVIQFEDTLEGEEDAEEAAAEKRGLQRRATPHPSELKVMKRGIEE RRNEAFVCKPDPSPPSPSEEEKRLSAESALSGGSVPSASTASEGEPEILPAEVQGLGQHEAMPAQEEYTE DDYNEPTVHFAEDTLIPREDGESEEGQPEAAWPLPSGRQRLIRKDTPHYKKHFKISKLPQPEAVVALLQG VQTDREGPTAGWHNGPHTPWAPRAHEEEEEEEEENRDEEEGEATTEEDDKEEAVASAPSVKGVSFDQANN LLIEPARIEEEELTLTIVRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVN GVALQDAEHHEAVEALRGAGAAVQMRVWRERMVEPENAVTITPLRPEDDYSPREWRGGGLRLPLLQPETP VSLRQRHAACLVRSEKGLGFSIAGGKGSTPYRAGDGGIFISRIAEGGAAHRAGTLQVGDRVLSINGVDMT EARHDHAVSLLTAASPTISLLLERETGGTYPPSPPPHSSPTPAATVAATVSTAVPGEPLLPRLSPSLLAT ALEGPYPVEEICLPRAGGPLGLSIVGGSDHSSHPFGVQDPGVFISKVLPRGLAARCGLRVGDRILAVNGQ DVREATHQEAVSALLRPCLELCLLVRRDPPPPGMRELCIQKAPGEKLGISIRGGAKGHAGNPCDPTDEGI FISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHAEAVQLLRSVGDTLTVLVCDGFDTSTTTALEVSP GVIANPFAAGLGHRNSLESISSIDRELSPEGPGKEKELASQALPWESESAETTGRNLEPLKLDYRALAAL PSAGSLQRGPSATTGGKTTEAPCSPGSQQTKPGVIQPLAQAWPRNSPAPRGRGGPCSPPSPDELPANVKQ AYRAFAAVPTVHPPENSATQPPTPGPAASPEQLSFRERQKYFELEVRVPQAEGPPKRVSLVGADDLRKMQ EEEARKLQQKRAQMLREEAVTSGPDMGLASDRESPDDQQEAEQPWAVPSHAGGSSPSSPPPLGGNAPVRT AKAERRHQERLRMQSPELPAPERALSPAERRALEAEKRALWRAARMKSLEQDALRAQMVLSKSQEGRGKR GPLERLAEAPSPAPTPSPTPLEDFGLQTSASPGRLPLSGKKFDYRAFAALPSSRPVYDIQSPDFVEELRT LEASPSPGSQEEDGEVALVLLGRPSPGAVGPEDMTLCSSRRSVRPGRRGLGPVPS
|