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Report for CCDS28943.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
28943.1 |
Public |
Mus musculus |
17 |
Ankrd12 |
23 |
108 |
98 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:106585](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:28943.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:106585](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 17 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 28943.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000038116.12 |
ENSMUSP00000039035.5 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000038116.12](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000039035.5](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000038116](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000039035](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001025572.1 |
NP_001020743.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001025572.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001020743.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001025572](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001020743](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001020743.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 28943.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (6126 nt): ATGCCCAAATCTGGGTTCACAAAACCAGTTCAGAGTGAAAATTCTGACAGTGACAGCAGTATGGTGGAGA GGCCATATGGAAGAAAGAGTAAAGACAAGATTGCATCTTACAGCAAAACTTCAAAAATTGACCGAGGTGA TATGGGCAAGGAAATGAGAGAGAAACCATCCATGAAACGAAAGCTGCCTTTTACAGTCAGCCCATCGAGA AATGAGGAGCGCGACTCAGACACAGATTCAGACCCAGGACATACAAGTGAAAATTGGGGGGAGAGACTTA TATCTTCTTACAGGACATACTCAGAAAAAGAAGGTCCAGAGAAGAAGAAAACAAAAAAAGAAGCTGGAAC TAAGAAGTCCACCCCAGTTAGCATTCTTTTTGGTTATCCACTTTCTGAACGAAAGCAGATGGCACTCCTA ATGCAGATGACAGCAAGGGACAACAGCCCAGATTCCACACCAAGTCATCCGTCACAGGCAACGCCAGCCC AGAAGAAAACGCCCAGCTCTTCATCTCGACAGAAAGATAAAATTAATAAAAGAAATGAGCGTGGCGAAAC TCCTTTACACATGGCCGCTATTCGAGGAGACGTGAAGCAAGTCAAAGAGTTAATTAGTTTAGGGGCAAAC GTCAATGTGAAGGACTTTGCAGGTTGGACCCCTTTGCATGAAGCTTGCAATGTTGGCTATTACGATGTTG CTAAGATACTGATAGCAGCTGGCGCAGACGTTAACACACAAGGACTGGATGATGACACCCCGCTCCATGA CTCTGCCAGCAGTGGCCATAGAGACATAGTGAAGTTGTTGCTTCGTCATGGCGGGAATCCATTCCAAGCT AATAAACATGGAGAACGGCCAGTGGATGTGGCAGAGACAGAGGAGTTGGAGTTGCTGCTAAAAAGAGAGG TGCCTTTGTCTGGCGATGATGAAAGTTATACAGATTCAGAAGAGGCTCAGTCTGTAAATCCTTCTAGTGT TGATGAAAATATTGACTCAGAGACAGAGAAAGACTCTTTCGTCTGTGGCAGTAAAATCCTCCCAAGCAAA GCCCCGCTGCCTTCTGCACTGGATGAGTATGAGTTCAAAGATGATGATGAAGAAGAGATAAGTAAGATGA TTGACGACAGGCACATTCTTAGGAAAGAACAGCGGAGAGAGAATGAATCTGAAGCAGAAAGGAGTGGTCT GTTTGCAAAACAGGAGAAAACCTTCTATTCTAAGTCATTTAAAACAAAAAAACAGAAGCCGTCAAGGGTT CTGTGCTCCAGTACTGAAAGCTCTGATGAAGAGGGTCTTCAGAACAGAAAGATTTCTACTGCTTGTTCTG TTGCTGAATCATCACATCCTGATATGCAAGCCAAAAAAGAATATGAATACAAACAGAAAGGCAAAGTTAA AAGAAAATTAAAAAATCAGAATAAAAACAAAGAGAACCAAGAGCTGAAACAAGAAAAAGAGGGGAAAGAA AATAGCAGGATAGCAACCTTGACAGTTAATACTGCGCTGGATTGTTCAGAAAAATACAGAGAGGAGGGGA ACTTCAGGAAATCTTTTAGCCCAAAGGATGATACTTCATTACACTTATTTCATATTTCCACTGGTAAATC TCCCAAACATTCCTGTGGATTAAGTGAAAAACAGACACCACTGAAGCAAGAACACACGAAAGCATGCATA TCCCCAGGAAGTTCTGAAATGTCATTACAGCCTGATCTCACTCGGTATGATAATGCAGAACCTGAAAGTT CAAATGTCAAATCTTATAAGCACAAGGAAAAAAACAAACAGCAGAAAGATTTTCACATAGAGTTTGGTGA AAAATCAAATGCCAAAATTAAAGATGAAGATCATAATCCAGCATTTGAAAACTCAGACTGCACACTGAAG AAGATGGATAAAGAGGGTAAAACATTAAAAAAACATAAATTAAAACATAAAGAGAAGGATAAAGAAAAGC ACAAAAAGGAAGTTGAAGGTGAAAAGGAAAAATATAAAAATAAAGACAATGCTAAAGAGCTACAGAGGAG CATCGAATTTGACAGAGAGTTTTGGAAAGAAAATTTTTTTAAAAGTGATGAAACTGAGGATCTCTTTTTA ACTATGGAACATGAGTCCATAATAGAAAAAAAGACAAAAATGGAAAAAAACATGAAAGATGATAGGTCAG CTAAAGAAAAGCATGTCTCAAAAGAAAGGAACTTTAAAGAAGAACGGGAAAAGACTAAAAAGGAAAATGA AAAATCTCTTAGGGAAGAAAAGGTAAAAGATCCGAAAGAAGAAAAAGACAGTGTATCCACAGAGAAGGAG GCCGAGTGCTGTTCGGTGGGTGTCAGTGTGAGCCAGGAAGCTGCAGGGCTGCATTCATCAGAAAAGGAAA TGGATGCTGAGAAGCAAGAAAGACACACAAAAGAGAGGGAAAAGTCTGATCGGCGCTTTCAGACTAAGGA GAAAGAGCTTGACAGGAACGAGAGGAAATTTTCTGAAAAAGAAAAGAAGATAAAACATGAACATAAGTCA GAAAGAGAGAAGCTGGATTTCAGTGACTGCACTGACAGAGTGAGAGAGAAGGACAAGCTGTACTCACACC AGACAGAAAGGTGCCACAAGGACAGCGAGAAGCTGAAAAACACTGTCAGAAAGACTGATGACAGAGAGAG GAACAGAGAAAAGGCGGATAGAAAGCACGACAGAGAGAAACCTGAACGAGAGAGGTACTTAGCAGAAAAC AAAGAAAAGCACTTAGAGAAAAGAAAGCAATCTGACAGCAGTGAGTATTCCAAATCAGAGAAGGTCAGAA CTAAAGACAGAGACAGGGAAGGAGAGAAGAAGGAGAAACTTAGAGATAAAGAAAGTGTAAATGTAACTAA CTTGAAACATTTGCAGGAAGAGAGAAAGTCCAGTACAGGAGACAGCAGTGGTAAAACCCAGCATGAGAAA GCTCTGTCCCTTAAAGAAAGGGCAAGAGATGAGCCTTTGAAAACTCCAGATGGAAAAGAGAAAGATAAAA AGGATATAGACAGATACAAAGAGCGAGACAAGCGTAAAGATAAAGCCCAGCTAAATACTTTAATCAGACT AAAATCTGAAACAGAGAAGCTTAAACCTAAATTATCACCAGCATCAAAAGATACTCGACCTAAAGAAAAG AGGTTAGTAAATGATGATTTAATGCAGACAAGTTTTGAACGAATGCTTAGCCTTAAAGACCTAGAAATAG AACAGTGGCACAGAAAACATAAGGAAAAAATTAAGCAAAAGGAAAAAGAACGATTACGCAATCGTACTTG TTTAGAACTTAAAGTAAAAGATAAAGAAAAAACAAAACATGCACCCACAGAATCCAAAAGTAAAGAACTT ACCAGGTCAAGAAGTTCAGAGTTGACTGATGTTTATAGCAAGGAGAAACAATCTAAAGATGTTGGCAGTA ATCGCTCACAATCTGTTGACAACAGAAATGTATTGAATTTAGGAAAGCCATCCTACATTTCAGAGAGTGG CTCCAACCGGTCTCCTAGGTCGGAAGGTGAGAGGCTGGGTCTTAGCTCTAGGTCTGTGTCCATGCTTTCT GTTGCTAGTTCAGAAGACTCTTGCCATACAGTGACAACCCCAAGGCCTCTCGTTGAGTATGACTCTGACT TTATGTTAGAGGGCTCGGAATCTCAGTTGTCATTTTCTCAGTCACCTTTTTTGCCAAATGCCAAATCTCC AGCTCTTTATGAAAGAGAGCTGGAGGGTCTCACTGAACTACCAGACCGACTTAAACCACCATATACAAAC AGACTTCCAGTGTGCCATCTCAGGTCATCTTCTGTGGAAGATGTTAAACTAATTACTAATGAGGTAAGAC CTGCTGTAGAAATTAGAAGATGCAGTATGCCCTCAGTTATCTGTGAGCCCATAAAACATTTCCAAGTATC AGAAGAAAGCAGTCAAGGCAACTTAGCTGTTCCCAGAGAGACCTGTCTGTCTCCCAAGCCTGAAGTGTCT TCAGCAGTACCTGAGAGGGGCCTTTCGCATGTGTCTGACTTACATCCTAACTGTACAGGCTCTCCAACGA GGTCTGCAAACAGCAGCTATATTTCATCTGATGTAAATGTAATCAAGAGTGCAACTCTTGTGGGTACACT GATTGACAGTTCGATGCATTTGGAACCGTCTAATCAGGTTGGAGTGATTCCAAGTAAATCATGGGAGACG CCTGTTGATAAACTGGAGTCTTTAAGCACCAATGACTTCATCTGTCCAGATTCTAATATATCTGATCAAG ATTCCTCTGCTCAGAGTTTTTATAATTCAGAAAACAAAATGTTAAGAGAACAAAATACTGACTGCTTACC TCCGCACCAGCCTGAACTGCCAGGAAACTCATGTGCTCAGGACCCAGCATCCTTTCTGTCTTCACCTCAG CCCTGCTCTTTTTCCAACCAACCACTGGCAGGTGCTGACTCTGTTCCGAAACCCGTGTCTTTGTCATATG TTGTCAGTCAAGAGCCAGGTGTTTTACAACAGAAAAGTGCAGCTCAGATGGCCAGTTCTGTTTTAGATAG TGATAATAACTTTCCAGAGGATGTGGAAAATACATTTGTCTTAGCAGACATTCAGAAGACAAATTCTTTT TTACCAGCTTACTCTGAAAGCACTGTGCAAGAAGCACTCCCAAGCTTTGAGAAGGCCAATACTTTGCTTG TGTTGCCATCAGAAAAGGACTTCAATGGGAGTGATACTGCTCAGCCAAACACACATTATGCATTTAGCAA ACTCACATACAAGTCTTCCAATAGCCAGGAAATTGAGAAGGGCCCAGATGATACTCAAATCATTTCACAT GAAAAGGAAAACAAATTACAAAGTTTGGTCTTAACTCAGTTGAGTAAATGTGATTCTGATTTGTATGAGA TGAATGCAGGGCTGCCAAAAGGAAACCTGAATGAACAGGATAACCCAAAGCATGGTCTTGACAGCGAAAA GTACTCGCTTTCCACTGAAGATGAAGAATCTCAGCAGAGCACCTTATCAAGTGTGGAAAACCATTCACAG CAGTCGGCCCAACCAGAGATGCATAAATATGACCAGCTTAGTAAAGTAGAACTAGAAGAAAATGCCGAAG ACGATAAAACTGAAAACCAGACCCCTCAAAGAGTGACTAGAAACAAAGCAAGCACAGTGGTCAATCCAAG CAAGCCCATGCTTGCTGGCTGTGCCCTTGTAGCAGAGAAAGATAACGAGTCCTCCCCTAGGGGACGAATC AGACTCACTGAAGAGGATGATCCTCAGATCCACCATCCTCGGAAGAGGAAAGTGTCACGGGTTCCTCAGC CTGTGCAAGTGAGCCCCTCTTTACTGCAAGCAAAGGAGAAAACTCAGCAGTCTCTAGCAGCCATTGTAGA TTCTCTGAAGTTAGATGAGATTGAGCCATACAGTTCTGAGAGAGCAAATCCATATTTTGAATATTTGCAC ATAAGAAAAAAAATTGAAGAAAAACGCAAGTTGCTATGTAGCGTTATCCCTCAAGCTCCTCAGTATTATG ATGAATACGTAACGTTTAATGGATCCTATCTCCTGGATGGAAACCCCTTAAGCAAGATTTGTATTCCTAC AATCACACCACCACCTTCGCTGTCAGATCCACTTAAAGAGCTCTTTCGGCAACAGGAAGTAGTAAGGATG AAACTGCGTTTGCAACATAGTATTGAAAGGGAAAAACTTATTGTATCCAATGAACAAGAAGTTCTGCGAG TTCATTACAGAGCTGCAAGAACACTGGCCAATCAAACACTGCCATTTAGTGCTTGTACTGTCTTACTGGA TGCAGAAGTGTACAATGTGCCCTTGGACTCACAGTCTGATGACAGCAAAACTTCTGTGAGAGATCGATTT AATGCAAGACAGTTCATGTCCTGGTTGCAAGATGTGGACGATAAATTTGACAAGCTAAAGACCTGTCTCT TAATGAGGCAGCAACACGAAGCTGCAGCTTTAAATGCCGTCCAGAGGCTAGAATGGCAGCTCAAACTCCA GGAGCTGGACCCTGCCACGTATAAGTCTCTCAGTATTTATGAAATCCAGGAGTTTTATGTTCCCCTTGTT GATGTTAATGATGATTTTGAACTGACTCCTATATAG
Translation (2041 aa): MPKSGFTKPVQSENSDSDSSMVERPYGRKSKDKIASYSKTSKIDRGDMGKEMREKPSMKRKLPFTVSPSR NEERDSDTDSDPGHTSENWGERLISSYRTYSEKEGPEKKKTKKEAGTKKSTPVSILFGYPLSERKQMALL MQMTARDNSPDSTPSHPSQATPAQKKTPSSSSRQKDKINKRNERGETPLHMAAIRGDVKQVKELISLGAN VNVKDFAGWTPLHEACNVGYYDVAKILIAAGADVNTQGLDDDTPLHDSASSGHRDIVKLLLRHGGNPFQA NKHGERPVDVAETEELELLLKREVPLSGDDESYTDSEEAQSVNPSSVDENIDSETEKDSFVCGSKILPSK APLPSALDEYEFKDDDEEEISKMIDDRHILRKEQRRENESEAERSGLFAKQEKTFYSKSFKTKKQKPSRV LCSSTESSDEEGLQNRKISTACSVAESSHPDMQAKKEYEYKQKGKVKRKLKNQNKNKENQELKQEKEGKE NSRIATLTVNTALDCSEKYREEGNFRKSFSPKDDTSLHLFHISTGKSPKHSCGLSEKQTPLKQEHTKACI SPGSSEMSLQPDLTRYDNAEPESSNVKSYKHKEKNKQQKDFHIEFGEKSNAKIKDEDHNPAFENSDCTLK KMDKEGKTLKKHKLKHKEKDKEKHKKEVEGEKEKYKNKDNAKELQRSIEFDREFWKENFFKSDETEDLFL TMEHESIIEKKTKMEKNMKDDRSAKEKHVSKERNFKEEREKTKKENEKSLREEKVKDPKEEKDSVSTEKE AECCSVGVSVSQEAAGLHSSEKEMDAEKQERHTKEREKSDRRFQTKEKELDRNERKFSEKEKKIKHEHKS EREKLDFSDCTDRVREKDKLYSHQTERCHKDSEKLKNTVRKTDDRERNREKADRKHDREKPERERYLAEN KEKHLEKRKQSDSSEYSKSEKVRTKDRDREGEKKEKLRDKESVNVTNLKHLQEERKSSTGDSSGKTQHEK ALSLKERARDEPLKTPDGKEKDKKDIDRYKERDKRKDKAQLNTLIRLKSETEKLKPKLSPASKDTRPKEK RLVNDDLMQTSFERMLSLKDLEIEQWHRKHKEKIKQKEKERLRNRTCLELKVKDKEKTKHAPTESKSKEL TRSRSSELTDVYSKEKQSKDVGSNRSQSVDNRNVLNLGKPSYISESGSNRSPRSEGERLGLSSRSVSMLS VASSEDSCHTVTTPRPLVEYDSDFMLEGSESQLSFSQSPFLPNAKSPALYERELEGLTELPDRLKPPYTN RLPVCHLRSSSVEDVKLITNEVRPAVEIRRCSMPSVICEPIKHFQVSEESSQGNLAVPRETCLSPKPEVS SAVPERGLSHVSDLHPNCTGSPTRSANSSYISSDVNVIKSATLVGTLIDSSMHLEPSNQVGVIPSKSWET PVDKLESLSTNDFICPDSNISDQDSSAQSFYNSENKMLREQNTDCLPPHQPELPGNSCAQDPASFLSSPQ PCSFSNQPLAGADSVPKPVSLSYVVSQEPGVLQQKSAAQMASSVLDSDNNFPEDVENTFVLADIQKTNSF LPAYSESTVQEALPSFEKANTLLVLPSEKDFNGSDTAQPNTHYAFSKLTYKSSNSQEIEKGPDDTQIISH EKENKLQSLVLTQLSKCDSDLYEMNAGLPKGNLNEQDNPKHGLDSEKYSLSTEDEESQQSTLSSVENHSQ QSAQPEMHKYDQLSKVELEENAEDDKTENQTPQRVTRNKASTVVNPSKPMLAGCALVAEKDNESSPRGRI RLTEEDDPQIHHPRKRKVSRVPQPVQVSPSLLQAKEKTQQSLAAIVDSLKLDEIEPYSSERANPYFEYLH IRKKIEEKRKLLCSVIPQAPQYYDEYVTFNGSYLLDGNPLSKICIPTITPPPSLSDPLKELFRQQEVVRM KLRLQHSIEREKLIVSNEQEVLRVHYRAARTLANQTLPFSACTVLLDAEVYNVPLDSQSDDSKTSVRDRF NARQFMSWLQDVDDKFDKLKTCLLMRQQHEAAALNAVQRLEWQLKLQELDPATYKSLSIYEIQEFYVPLV DVNDDFELTPI
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