CCDS Report for Consensus CDS

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Report for CCDS2950.1 (current version)

CCDS	Status	Species	Chrom.	Gene	CCDS Release	NCBI Annotation Release	Ensembl Annotation Release	Links
2950.1	Public	Homo sapiens	3	BBX	24	110	108

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2950.1

Source	Nucleotide ID	Protein ID	Status in CCDS	Seq. Status
EBI	ENST00000406780.5	ENSP00000385530.1	Accepted	alive
EBI	ENST00000415149.6	ENSP00000408358.2	Accepted	alive
NCBI	NM_020235.7	NP_064620.2	Accepted	alive

RefSeq	Length	Related UniProtKB/SwissProt	Length	Identity	Gaps	Mismatches
NP_064620.2	911	Q8WY36-2	911	100%	0	0

Chromosomal Locations for CCDS 2950.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)

Genome Browser links:

Chromosome	Start	Stop
3	107710461	107710622
3	107716607	107716849
3	107728765	107728960
3	107732956	107733023
3	107744630	107744710
3	107747965	107748039
3	107755598	107755678
3	107772628	107773636
3	107774719	107774857
3	107778371	107778519
3	107791240	107791299
3	107798523	107798720
3	107801095	107801281
3	107805370	107805457

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.

Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2736 nt):
ATGAAAGGCAGTAATAGAAATAAGGATCATTCAGCAGAAGGAGAAGGGGTTGGAAAACGACCAAAACGAA AGTGTCTTCAGTGGCATCCATTGCTAGCAAAGAAACTTCTTGATTTTTCAGAAGAGGAAGAAGAGGAAGA CGAAGAGGAGGATATTGATAAGGTTCAACTTCTTGGGGCCGATGGCCTAGAGCAAGATGTTGGTGAAACT GAAGATGATGAATCACCAGAGCAGCGAGCCCGGAGACCAATGAATGCATTTCTTTTATTTTGCAAACGCC ATCGCTCTCTTGTACGTCAGGAACACCCCAGGCTTGATAACCGAGGTGCTACCAAGATACTAGCTGATTG GTGGGCTGTTCTTGATCCAAAGGAAAAGCAGAAATACACAGACATGGCCAAGGAGTATAAGGATGCATTT ATGAAAGCAAATCCTGGCTACAAATGGTGTCCTACCACAAACAAGCCTGTGAAATCCCCAACACCCACTG TCAATCCACGAAAGAAACTTTGGGCCTTCCCATCTGACTCTTCAAGAGACTTGCCAAGCCCCAAGAAAGC AAAGACTGAAGAAATGCCTCAGCTTAACTTTGGAATGGCTGATCCTACTCAAATGGGAGGCCTGAGTATG CTGCTGTTAGCTGGAGAACATGCTCTTGGCACACCAGAGGTATCCTCTGGCACATGCAGGCCTGATGTTT CAGAATCTCCTGAATTACGTCAGAAGTCACCATTGTTTCAGTTTGCCGAGATATCTTCAAGTACGTCCCA CTCTGATGCTTCTACAAAGCAGTGTCAAACATCTGCCTTGTTTCAGTTTGCAGAGATTTCTTCAAACACT TCGCAGTTGGGTGGTGCTGAGCCTGTAAAACGCTGTGGAAAGTCTGCACTCTTTCAACTGGCAGAGATGT GCCTGGCATCAGAAGGGATGAAAATGGAAGAATCAAAGCTAATAAAAGCAAAAGAATCCGATGGTGGAAG AATTAAAGAATTAGAGAAGGGAAAGGAAGAAAAAGAAATTAAAATGGAGAAAACAGATGAAACTAGGTTA CAGAAGGAAGCAGAATTTGAAAAATCGGCTAAGGAAAATTTAAGAGATTCTAAGGAATTGAGAAATTTTG AGGCATTGCAAATAGATGACATAATGGCTATAAAAATGGAAGATCCCAAAGAAATTAGAAAGGAAGAGTT AGAAGAAGATCACAAATGTAGTCATTTTCCTGATTTTTCTTATTCTGCCAGTAGCAAGATAATAATTAGT GATGTTCCCAGTAGAAAGGATCATATGTGCCATCCTCATGGAATTATGATCATTGAGGATCCCGCAGCAT TAAACAAGCCAGAAAAGCTAAAAAAGAAAAAGAAGAAAAGCAAAATGGATCGACATGGAAATGATAAATC CACACCCAAGAAGACTTGCAAAAAGAGGCAGTCTTCGGAATCTGACATTGAGAGCGTCATATATACCATT GAAGCCGTCGCAAAAGGAGACTGGGGCATAGAGAAACTTGGAGATACCCCTCGCAAGAAGGTCCGCACAT CCTCAAGTGGCAAGGGAAGCATTTTGGATGCCAAGCCACCAAAGAAAAAAGTGAAATCAAGAGAGAAGAA AATGTCAAAGGAGAAATCCTCAGACACCACCAAAGAGTCAAGACCTCCAGATTTCATTAGTATTTCTGCT AGCAAGAACATTTCTGGTGAGACACCAGAGGGTATAAAAGCAGAACCATTGACCCCTATGGAAGATGCAC TACCACCCAGCCTATCAGGACAGGCCAAGCCTGAGGACAGTGACTGTCACAGAAAAATAGAAACTTGTGG TTCCAGGAAATCCGAGAGGTCTTGCAAAGGTGCTCTTTATAAAACCCTGGTGTCTGAGGGCATGCTCACC TCTCTGCGAGCTAATGTTGACAGAGGAAAACGAAGCTCAGGAAAAGGAAACTCCTCTGATCATGAAGGGT GTTGGAATGAAGAAAGCTGGACATTTAGTCAGAGTGGGACCAGTGGGAGCAAGAAGTTCAAGAAGACAAA GCCAAAAGAAGACTGTCTCCTTGGCTCCGCAAAGCTGGATGAAGAATTTGAAAAAAAATTCAACAGCCTC CCTCAATATAGTCCTGTTACATTTGACCGGAAATGTGTACCTGTCCCAAGAAAAAAGAAGAAGACTGGAA ATGTGTCCTCAGAACCGACTAAAACCAGCAAAGGAAGTGGGGATAAATGGTCAAACAAGCAACTCTTCTT GGATGCCATTCACCCTACAGAAGCCATATTTTCAGAAGACAGAAACACCATGGAGCCTGTTCATAAGGTT AAAAATATCCCATCCATTTTCAACACTCCAGAGCCAACAACAACGCAAGAACCTTTGGTGGGCAGCCAAA AGAGAAAAGCAAGGAAAACCAAGATTACACACCTTGTCAGGACAGCAGATGGCCGGGTATCACCAGCAGG AGGTACTTTGGATGACAAACCAAAGGAACAACTGCAGAGGAGTCTCCCTAAAGCAACTGAGACAGACTGC AATGACAAATGCTCACACAACACCGAGGTCGGGGAGACGCGGAGCAGTACTCCAGAAATGCCTGCCGTGT CTGCGTTCTTTAGCCTCGCTGCGCTGGCTGAAGTGGCAGCCATGGAAAATGTGCACAGAGGTCAGAGGTC AACTCCGCTCACCCATGATGGACAGCCAAAAGAAATGCCGCAGGCTCCTGTACTTATTTCCTGCGCTGAC CAGTGA
Translation (911 aa):
MKGSNRNKDHSAEGEGVGKRPKRKCLQWHPLLAKKLLDFSEEEEEEDEEEDIDKVQLLGADGLEQDVGET EDDESPEQRARRPMNAFLLFCKRHRSLVRQEHPRLDNRGATKILADWWAVLDPKEKQKYTDMAKEYKDAF MKANPGYKWCPTTNKPVKSPTPTVNPRKKLWAFPSDSSRDLPSPKKAKTEEMPQLNFGMADPTQMGGLSM LLLAGEHALGTPEVSSGTCRPDVSESPELRQKSPLFQFAEISSSTSHSDASTKQCQTSALFQFAEISSNT SQLGGAEPVKRCGKSALFQLAEMCLASEGMKMEESKLIKAKESDGGRIKELEKGKEEKEIKMEKTDETRL QKEAEFEKSAKENLRDSKELRNFEALQIDDIMAIKMEDPKEIRKEELEEDHKCSHFPDFSYSASSKIIIS DVPSRKDHMCHPHGIMIIEDPAALNKPEKLKKKKKKSKMDRHGNDKSTPKKTCKKRQSSESDIESVIYTI EAVAKGDWGIEKLGDTPRKKVRTSSSGKGSILDAKPPKKKVKSREKKMSKEKSSDTTKESRPPDFISISA SKNISGETPEGIKAEPLTPMEDALPPSLSGQAKPEDSDCHRKIETCGSRKSERSCKGALYKTLVSEGMLT SLRANVDRGKRSSGKGNSSDHEGCWNEESWTFSQSGTSGSKKFKKTKPKEDCLLGSAKLDEEFEKKFNSL PQYSPVTFDRKCVPVPRKKKKTGNVSSEPTKTSKGSGDKWSNKQLFLDAIHPTEAIFSEDRNTMEPVHKV KNIPSIFNTPEPTTTQEPLVGSQKRKARKTKITHLVRTADGRVSPAGGTLDDKPKEQLQRSLPKATETDC NDKCSHNTEVGETRSSTPEMPAVSAFFSLAALAEVAAMENVHRGQRSTPLTHDGQPKEMPQAPVLISCAD Q

	Links Key
	Links to:	History report BLAST report Entrez Gene Nucleotide report Protein report
	Re-query CCDS DB by:	CCDS ID Gene ID Nucleotide ID Protein ID
	Genome Browser Links:	Ensembl Genome Browser NCBI Sequence Viewer UCSC Genome Browser VEGA Genome Browser

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