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Report for CCDS29635.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
29635.1 Public Mus musculus 19 Or5b95 23 108 98 CCDS HistoryNCBI Gene:258693Re-query CCDS DB by CCDS ID:29635.1Re-query CCDS DB by GeneID:258693See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 29635.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000049724.7 ENSMUSP00000059886.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000049724.7Link to Ensembl Protein Viewer:ENSMUSP00000059886.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000049724Re-query CCDS DB by Protein ID:ENSMUSP00000059886
Original member Current member EBI ENSMUST00000213486.1 ENSMUSP00000148908.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000213486.1Link to Ensembl Protein Viewer:ENSMUSP00000148908.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000213486Re-query CCDS DB by Protein ID:ENSMUSP00000148908
Original member Current member EBI ENSMUST00000215134.1 ENSMUSP00000150063.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000215134.1Link to Ensembl Protein Viewer:ENSMUSP00000150063.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000215134Re-query CCDS DB by Protein ID:ENSMUSP00000150063
Original member Current member NCBI NM_146698.2 NP_666909.1 Accepted alive Link to Nucleotide Sequence:NM_146698.2Link to Protein Sequence:NP_666909.1Re-query CCDS DB by Nucleotide ID:NM_146698Re-query CCDS DB by Protein ID:NP_666909Link to BLAST:NP_666909.1

Chromosomal Locations for CCDS 29635.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 12680110 12681048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (939 nt):
ATGGAGAACAGGACAGAGGTGACAGAGTTCATTCTTCTAGGTGTGACCAATGCCCCAGCACTGCAGACCC
CACTCTTTATCCTGTTCACTCTTATCTACTTCATCAACATGACTGGAAACTTGGGGATGCTTGTGCTGAT
TCTCTGGGACTCTCGACTCCACACTCCCATGTACATTTTTCTTGGTAATTTATCCCTGGTAGACATCTTT
TACTCCTCTGCTGTTACCCCAACAGTTGTTGCTGGACTTCTTGTAGGAAACCAAGCCATTTCCTACAATG
CTTGTGCTGCCCAGATGTTCTTGTTTGTAGTCTTTGCTACGGCAGAAAATTTTCTCTTGGCTGCAATGGC
CTATGACCGCTATGCAGCAGTGTGCAAACCCCTGCATTATACCACCACTATGACTCCAACTACATGTGCA
TGTCTGACCATGGCCTGCTATGCTGGTGGTTTCCTGAATTCCTCTATCCATACTGGGGACACATTCAGAC
TCTACTTCTGCAAGTCCAATGTGGTCCATCACTTTTTCTGTGATGTTCCAGCCGTCATGGTTCTCTCTTG
CTCTGATAGACACATCAGTGAGATGGTCCTCCTATATGGAGCAAGTTTTGTCATCTGTTCTGCACTCCTT
GTTATTTTGATATCTTACATATTCATTTTTATCACCATCTTCAAGATGCGCTCAGCTGCAGGATACCAGA
AGGCTATGTCTACCTGTGTTTCTCACTTCACTGCTGTCTCTATTTTCTATGGCACTCTTATTTTCATGTA
CTTGCAGCCCAGCTCCAGCCACTCCATGGACACTGACAAAATCGTGTCTGTGTTCTACACCATGGTCATT
CCCATGCTGAACCCTGTGGTCTATAGCTTAAGGAACAAGGAGGTGAAAAGTGCATTCAAGAAAGTTGTGG
AGAAAGCAAAATATACCTTAGGATTTTGA

Translation (312 aa):
MENRTEVTEFILLGVTNAPALQTPLFILFTLIYFINMTGNLGMLVLILWDSRLHTPMYIFLGNLSLVDIF
YSSAVTPTVVAGLLVGNQAISYNACAAQMFLFVVFATAENFLLAAMAYDRYAAVCKPLHYTTTMTPTTCA
CLTMACYAGGFLNSSIHTGDTFRLYFCKSNVVHHFFCDVPAVMVLSCSDRHISEMVLLYGASFVICSALL
VILISYIFIFITIFKMRSAAGYQKAMSTCVSHFTAVSIFYGTLIFMYLQPSSSHSMDTDKIVSVFYTMVI
PMLNPVVYSLRNKEVKSAFKKVVEKAKYTLGF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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