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Report for CCDS29745.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
29745.1 Public Mus musculus 19 Prkg1 23 108 98 CCDS HistoryNCBI Gene:19091Re-query CCDS DB by CCDS ID:29745.1Re-query CCDS DB by GeneID:19091See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 29745.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000065067.13 ENSMUSP00000067576.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000065067.13Link to Ensembl Protein Viewer:ENSMUSP00000067576.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000065067Re-query CCDS DB by Protein ID:ENSMUSP00000067576
Original member Current member NCBI NM_001013833.3 NP_001013855.1 Accepted alive Link to Nucleotide Sequence:NM_001013833.3Link to Protein Sequence:NP_001013855.1Re-query CCDS DB by Nucleotide ID:NM_001013833Re-query CCDS DB by Protein ID:NP_001013855Link to BLAST:NP_001013855.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001013855.1 671 P0C605-1 671 100% 0 0

Chromosomal Locations for CCDS 29745.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 30569238 30569336 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 30571612 30571678 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 30578610 30578672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 30578758 30578880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 30585139 30585302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 30586266 30586407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 30592848 30592937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 30594942 30595081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 30624682 30624778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 30696883 30696957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 30724160 30724225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 30781295 30781389 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 30786894 30786971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 30894632 30894695 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 30993057 30993162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 31302286 31302399 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 31585567 31585733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 31764557 31764822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2016 nt):
ATGAGCGAACTGGAGGAAGACTTTGCGAAGATTCTCATGCTCAAGGAGGAGAGGATCAAAGAGCTGGAGA
AGCGGCTGTCAGAGAAGGAGGAAGAAATCCAGGAGCTGAAGAGGAAACTCCACAAATGCCAGTCGGTGCT
GCCGGTGCCCTCCACCCACATCGGCCCGCGGACCACCCGGGCGCAGGGCATCTCCGCGGAGCCGCAGACC
TACAGGTCCTTCCACGACCTGCGCCAGGCGTTCCGGAAGTTCACTAAATCCGAGAGGTCGAAGGATCTCA
TAAAGGAGGCTATCCTTGACAATGACTTCATGAAGAACTTGGAGCTGTCACAGATCCAGGAGATTGTGGA
CTGTATGTACCCCGTGGAATACGGCAAGGACAGCTGCATCATCAAGGAAGGCGATGTGGGGTCACTGGTG
TACGTCATGGAAGATGGGAAGGTTGAAGTCACAAAAGAAGGCGTGAAGCTCTGCACCATGGGTCCTGGAA
AAGTGTTCGGGGAGCTGGCTATACTTTACAACTGTACCCGGACAGCGACCGTCAAGACTCTTGTAAATGT
GAAACTCTGGGCCATCGATCGACAATGTTTTCAAACAATAATGATGAGGACAGGACTCATCAAGCATACC
GAGTACATGGAATTTTTAAAAAGTGTTCCAACATTCCAGAGCCTTCCTGATGAAATCCTCAGCAAGCTGG
CTGATGTCCTCGAAGAGACCCACTATGAAAATGGAGAATATATCATCAGGCAGGGTGCAAGAGGAGACAC
CTTCTTCATCATCAGTAAAGGGCAGGTGAATGTTACTCGAGAAGACTCACCAAGTGAAGACCCAGTCTTC
CTTAGAACTTTAGGGAAGGGAGATTGGTTTGGAGAGAAAGCGTTGCAGGGGGAGGATGTGAGAACAGCAA
ATGTTATTGCCGCAGAAGCTGTCACCTGCCTTGTGATTGACAGAGACTCTTTCAAGCATTTGATTGGAGG
ACTGGACGATGTTTCTAACAAAGCATATGAGGACGCAGAAGCAAAAGCAAAATATGAAGCCGAAGCTGCC
TTCTTCGCCAACCTGAAGCTGTCTGATTTCAACATCATTGACACCCTTGGAGTTGGAGGTTTCGGACGAG
TAGAGCTGGTCCAGTTGAAAAGTGAAGAATCCAAAACATTTGCAATGAAGATCCTCAAGAAACGCCACAT
TGTGGACACCAGACAGCAGGAGCACATCCGCTCAGAGAAGCAGATCATGCAGGGGGCTCATTCTGACTTC
ATTGTGAGGCTGTACAGGACATTTAAAGACAGCAAATACTTGTATATGTTGATGGAAGCGTGCCTGGGTG
GAGAGCTCTGGACTATTCTCAGGGATAGGGGTTCGTTTGAAGACTCAACAACCAGGTTTTACACTGCATG
TGTGGTAGAAGCATTCGCCTATCTGCATTCCAAAGGAATCATTTACAGGGACCTCAAGCCGGAGAATCTC
ATCCTAGATCATCGAGGCTATGCCAAACTGGTTGACTTTGGCTTTGCAAAGAAAATAGGATTTGGAAAGA
AAACATGGACTTTTTGTGGGACTCCAGAATATGTAGCCCCAGAGATCATCCTGAACAAAGGCCATGACAT
TTCAGCTGACTACTGGTCACTAGGAATTCTGATGTATGAGCTTCTGACTGGCAGCCCACCTTTCTCAGGC
CCAGATCCAATGAAAACCTACAATATCATACTGCGGGGGATTGACATGATAGAATTTCCAAAGAAGATTG
CAAAAAATGCTGCTAATTTAATTAAAAAACTATGCAGGGACAACCCATCAGAGAGGTTAGGAAATTTGAA
AAACGGAGTCAAAGACATTCAGAAACACAAGTGGTTTGAGGGCTTTAATTGGGAAGGCTTAAGAAAAGGC
ACCTTGACACCTCCCATAATTCCAAGTGTTGCGTCACCCACAGACACAAGCAATTTTGACAGTTTCCCTG
AGGACAGCGATGAGCCACCACCTGATGACAACTCAGGCTGGGACATAGACTTCTAA

Translation (671 aa):
MSELEEDFAKILMLKEERIKELEKRLSEKEEEIQELKRKLHKCQSVLPVPSTHIGPRTTRAQGISAEPQT
YRSFHDLRQAFRKFTKSERSKDLIKEAILDNDFMKNLELSQIQEIVDCMYPVEYGKDSCIIKEGDVGSLV
YVMEDGKVEVTKEGVKLCTMGPGKVFGELAILYNCTRTATVKTLVNVKLWAIDRQCFQTIMMRTGLIKHT
EYMEFLKSVPTFQSLPDEILSKLADVLEETHYENGEYIIRQGARGDTFFIISKGQVNVTREDSPSEDPVF
LRTLGKGDWFGEKALQGEDVRTANVIAAEAVTCLVIDRDSFKHLIGGLDDVSNKAYEDAEAKAKYEAEAA
FFANLKLSDFNIIDTLGVGGFGRVELVQLKSEESKTFAMKILKKRHIVDTRQQEHIRSEKQIMQGAHSDF
IVRLYRTFKDSKYLYMLMEACLGGELWTILRDRGSFEDSTTRFYTACVVEAFAYLHSKGIIYRDLKPENL
ILDHRGYAKLVDFGFAKKIGFGKKTWTFCGTPEYVAPEIILNKGHDISADYWSLGILMYELLTGSPPFSG
PDPMKTYNIILRGIDMIEFPKKIAKNAANLIKKLCRDNPSERLGNLKNGVKDIQKHKWFEGFNWEGLRKG
TLTPPIIPSVASPTDTSNFDSFPEDSDEPPPDDNSGWDIDF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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