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Report for CCDS29894.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
29894.1 |
Public |
Mus musculus |
19 |
Gsto2 |
23 |
108 |
98 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:68214](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:29894.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:68214](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 19 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 29894.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000056159.10 |
ENSMUSP00000052592.4 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000056159.10](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000052592.4](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000056159](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000052592](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000120645.7 |
ENSMUSP00000113409.1 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000120645.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000113409.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000120645](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000113409](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000135016.2 |
ENSMUSP00000119680.2 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000135016.2](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000119680.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000135016](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000119680](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_026619.2 |
NP_080895.2 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_026619.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_080895.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_026619](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_080895](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_080895.2](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_030051.1 |
NP_084327.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_030051.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_084327.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_030051](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_084327](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_084327.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 29894.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (747 nt): ATGTCCGGGGATTTGTCAAGATGCTTGGGAAAAGGAAGCTGTCCCCCAGGGCCGGTCCCTGAGGGTGTGA TCCGAATCTACAGCATGAGGTTCTGCCCCTACTCGCACAGGGCACGCCTGGTTCTCAAGGCCAAAGGCAT CAGGCATGAAGTGATCAATATTAACCTGAAAAGCAAGCCTGACTGGTACTATACAAAGCATCCTTTTGGC CAAATTCCTGTCTTGGAGAACAGCCAGTGTCAGCTGGTCTATGAATCTGTCATTGCTTGTGAGTACCTGG ATGACGTCTACCCGGGAAGAAAGCTGTTTCCGTATGACCCGTATGAACGAGCTCGCCAGAAGATGTTATT GGAGCTATTCTGTAAGGTCCCGCCTTTAAGCAAGGAATGTCTGATAGCGCTGAGATGCGGAAGAGACTGT ACGGATCTGAAGGTCGCCCTGCGTCAGGAGTTGTGCAACATGGAAGAGATTCTTGAATATCAGAACACTA CCTTCTTCGGCGGAGACTGTATATCCATGATTGATTACCTCGTCTGGCCCTGGTTTGAGCGCCTGGACGT ATATGGACTGGCTGACTGCGTGAATCACACCCCGATGCTGCGGCTCTGGATAGCCTCCATGAAGCAGGAC CCTGCAGTGTGTGCTCTGCACACTGATAAGAGCGTCTTCCTGGGCTTCTTGAATCTCTATTTCCAAAACA ACCCTTGTGCCTTTGATTTTGGGCTGTGTAACCCAATCATACGATAA
Translation (248 aa): MSGDLSRCLGKGSCPPGPVPEGVIRIYSMRFCPYSHRARLVLKAKGIRHEVININLKSKPDWYYTKHPFG QIPVLENSQCQLVYESVIACEYLDDVYPGRKLFPYDPYERARQKMLLELFCKVPPLSKECLIALRCGRDC TDLKVALRQELCNMEEILEYQNTTFFGGDCISMIDYLVWPWFERLDVYGLADCVNHTPMLRLWIASMKQD PAVCALHTDKSVFLGFLNLYFQNNPCAFDFGLCNPIIR
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