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Report for CCDS30352.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30352.1 Public Mus musculus X Wmp 23 108 98 CCDS HistoryNCBI Gene:213450Re-query CCDS DB by CCDS ID:30352.1Re-query CCDS DB by GeneID:213450See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 30352.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000101290.1 ENSMUSP00000098848.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000101290.1Link to Ensembl Protein Viewer:ENSMUSP00000098848.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000101290Re-query CCDS DB by Protein ID:ENSMUSP00000098848
Original member Current member NCBI NM_001033252.2 NP_001028424.1 Accepted alive Link to Nucleotide Sequence:NM_001033252.2Link to Protein Sequence:NP_001028424.1Re-query CCDS DB by Nucleotide ID:NM_001033252Re-query CCDS DB by Protein ID:NP_001028424Link to BLAST:NP_001028424.1

Chromosomal Locations for CCDS 30352.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 107945755 107947265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 107948307 107948346 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1551 nt):
ATGGAGAATGATAAGAGTGAAGAACAAAGGAGAGCACAAGTGTCCGGATATCTCAAAAATTACTTGGAAG
ATTCAAATTGTTATTGTGATTCCTTCCACTCATGCTTATATTATTCAAAATGTTTTAACAATAACGTATC
TATGAATAAAGGGCAAACAAGTGAGAAGAAACACATACAGAACCAAAATATCAACCATGCTGGTGATTTC
AAAAATGTGCTACAGTGTCAACTCTTGAAAGAACATATCCCTGTGGATCACATTCCAGCCTCTGGTAATG
AGGAATCTCATTCATACTTAGATCAATATGATGGTGGCTCTTCCTCCTATATTTTCCAATCAAATAGAAA
CAAGTGTCAAGGAAGATATGCAGCAAACGACTTACCTGATGTGCAGGACCATTTCTACCACTGTATTGGG
CATGTGAGCAAGTCACAGCCTCGTGTCCTTTATGGGATTGGTAAGGGGGGTGTGGTGCTTAGGCAAGGAC
CAACTCTGGCTCATTACAAATCCAATGTATTTGTCAACCCACTGGCACCAGAAGCACCACCATTACCATC
TGATTGGCTCATCCAACTTATCAGTTCTAAACGACCATCTGCTCATGGAGTTGTAAGCTCAAGAAGATCA
AGAGGAACATCTTCCTTACTTGTTTTGGAAAGAACTACAACATTACCACCTGCTTCCTCAAAGAGTAATC
CTAACATAGATCTAATAATGCTACCTGAAGTTGAGTTTACTGCCACATCAGAATCACTTGAATATTATGA
ACTACAAAAACAAGGTGGTCTAAATCCACAGGGTCTGAATCAGGAGATCGCTCTACTTGTACATCCTTCA
GTAATTCCACTAAAAAATCAGTCATGGGATTCAATTGTGGATCTTATTGACTCTTCTTTAGTTTTGAACA
CACAATCCATAAAGTCTTCTTTTCCAAAGTCACCAAGATCTCCATCAAAATCAAACTCTGAACATGGATC
ACTATCACCAAATCCAGTTGCAAATACATCAAGGATTTCTACTACCCAATCACCAAGATCTTACAGGGTA
CCTTGTTGTTTTTCTTCAGTACCTGCCTCACAGAGTCCCAAACCACAAATAACTTTAAATCCATTACCAG
AGCATTCAGTGAGTCACTTAATAAAACTTATTGAGGCACAGTCAAAGTTACCCATGACACTTTCAAAAAG
ACAATTACATCCACCACAAGCAAAACTATCAAGTTTCACCTTGAGTGAAGTTTCCACTCTACAGTCATCG
TTGTCTTCTATGAAATCATCTATTTCAGGCCAGAGAGCTCTAAAAATAAGGCAGTATACAATAGAGTCAG
CATATGCCAGTATCATGCAAACCCCTTCAAGCCTGCCAATAATGACCAAACCAAGAAATGAATTGATGGA
AGAAATCAGAAAAGGCATTAAACTTCACAAAACTCAACCAAGACCTGAAAATGAGGATCTTGAAAATGGA
GCAGAAATGATCCGGGTTCGTCGTAAAGCGATGGGGTATCATTCAGAAAAATCGGATAGCGAAACTGAAT
GGATTGAATAA

Translation (516 aa):
MENDKSEEQRRAQVSGYLKNYLEDSNCYCDSFHSCLYYSKCFNNNVSMNKGQTSEKKHIQNQNINHAGDF
KNVLQCQLLKEHIPVDHIPASGNEESHSYLDQYDGGSSSYIFQSNRNKCQGRYAANDLPDVQDHFYHCIG
HVSKSQPRVLYGIGKGGVVLRQGPTLAHYKSNVFVNPLAPEAPPLPSDWLIQLISSKRPSAHGVVSSRRS
RGTSSLLVLERTTTLPPASSKSNPNIDLIMLPEVEFTATSESLEYYELQKQGGLNPQGLNQEIALLVHPS
VIPLKNQSWDSIVDLIDSSLVLNTQSIKSSFPKSPRSPSKSNSEHGSLSPNPVANTSRISTTQSPRSYRV
PCCFSSVPASQSPKPQITLNPLPEHSVSHLIKLIEAQSKLPMTLSKRQLHPPQAKLSSFTLSEVSTLQSS
LSSMKSSISGQRALKIRQYTIESAYASIMQTPSSLPIMTKPRNELMEEIRKGIKLHKTQPRPENEDLENG
AEMIRVRRKAMGYHSEKSDSETEWIE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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